mRNA_H-paniculata_contig2725.7452.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A6H5KPV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV7_9PHAE) HSP 1 Score: 350 bits (898), Expect = 6.390e-114 Identity = 179/239 (74.90%), Postives = 208/239 (87.03%), Query Frame = 1
Query: 1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEG-----AVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRA-AMGDE-------RGEGRR-PGMFDTLKAMTDDLGTNASPQV 675
VGDTAGAI+HYE+AGTHC EVPRML+ER RVEDLEEYITQGNN +LLKWWSQY+ESRGEFEKAR+ YTRAQD+LS+VRLACQ G VE A++IVN+SGSAPAAYHLARHLEA+GRTAEAV+FY RS+RFNHAIRLAKDHGMDSELMGFAL+SRP+LMVSVA++L+ KGE+EKAVQLYQKAG+V +ALD+CFR+ A G E GEG + P MF+ LK+M DDLG++ASPQV
Sbjct: 101 VGDTAGAIQHYELAGTHCVEVPRMLYERGRVEDLEEYITQGNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQVERVRHRQAIEIVNESGSAPAAYHLARHLEAVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKSRPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKALDLCFRSGAAGGEADQKHGGEGEGEKSPAMFEALKSMMDDLGSHASPQV 339
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI) HSP 1 Score: 350 bits (898), Expect = 4.780e-108 Identity = 180/239 (75.31%), Postives = 207/239 (86.61%), Query Frame = 1
Query: 1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEG-----AVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFR--AAMGDE------RGEGRR-PGMFDTLKAMTDDLGTNASPQV 675
VGDTAGAI+HYE+AGTHC EVPRML+ER RVEDLEEYITQGNN +LLKWWSQY+ESRGEFEKAR+ YTRAQD+LS+VRLACQ G VE A+ IVN+SGSAPAAYHLARHLEA+GRTAEAV+FY RS+RFNHAIRLAKDHGMDSELMGFAL+SRP+LMVSVA++L+ KGE+EKAVQLYQKAG+V +ALD+CFR AA G+ GEG R P MF+ LK+M DDLG++ASPQV
Sbjct: 1050 VGDTAGAIQHYELAGTHCVEVPRMLYERGRVEDLEEYITQGNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQVERVRHRQAIGIVNESGSAPAAYHLARHLEAVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKSRPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKALDLCFRSGAASGEADQKHGGEGEGERSPAMFEALKSMMDDLGSHASPQV 1288
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S1UFU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFU4_9STRA) HSP 1 Score: 257 bits (657), Expect = 1.890e-80 Identity = 130/225 (57.78%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQV 675
+G+ A HYE A TH EVPRMLFE+ R+EDLE+YI + ++EL +WW+ Y ES +F+KAR +Y RA D LS VRLAC + D+E A DI+ND+ SA AAYH+ARHLE + EA+ +YT+S +NHAIRLAK HG+D+ELM FAL+SRP+LMV A + E+KGE+EKAVQLYQK GD+ +ALD+CFRA EGRR MFD L+ +TD+LG SPQV
Sbjct: 198 IGEYKAAARHYESAETHRKEVPRMLFEQHRLEDLEKYIVRAGDSELQRWWAAYCESVSDFDKARAYYKRAGDNLSRVRLACYNRDLERAADIINDTKSASAAYHMARHLEGINEIREAIVYYTKSGCYNHAIRLAKAHGLDAELMSFALKSRPSLMVDCAAYFEKKGEIEKAVQLYQKGGDIPKALDLCFRAGA-----EGRR-SMFDVLRNITDELGATTSPQV 416
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S3Y5S0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S0_HETAK) HSP 1 Score: 249 bits (636), Expect = 1.880e-75 Identity = 132/224 (58.93%), Postives = 160/224 (71.43%), Query Frame = 1
Query: 4 GDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQV 675
GD AGAI+HYE AGTH EVPRMLFER RV+DLE YITQG + +LLKWW+ Y+ES+G +KAR+ Y A+D L++VRLAC + D E A +V SGS AAYHLAR EA G EAV Y S R+NHAIRLAK +GMD EL+GFAL+S PA V VA + E KGE EKAV+LYQK GD +ALD+CF+A EGR+ G+FD L+ + + LG SPQV
Sbjct: 98 GDGAGAIQHYEAAGTHQTEVPRMLFERRRVDDLEHYITQGKDPKLLKWWAGYLESKGALDKARRFYAGAEDHLALVRLACYNQDFEEARRLVEKSGSRAAAYHLARQHEARGEVQEAVGQYAASGRYNHAIRLAKAYGMDLELVGFALKSDPAQTVDVARYFELKGEYEKAVELYQKGGDAPKALDLCFKAGA-----EGRK-GVFDALRQIAEGLGEETSPQV 315
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA) HSP 1 Score: 241 bits (616), Expect = 7.160e-70 Identity = 127/228 (55.70%), Postives = 160/228 (70.18%), Query Frame = 1
Query: 1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGT---NASPQV 675
+GDT GAI+HYE A TH EVPRML ER R+ +LE YI + EL+KWW++Y ES G+ AR Y RA D LS+VRLAC +GD+ A IV D+GS AAYHLAR E G EAVA Y RS +NHA+RLAK HGMD+ELM FA+QSRP+LMV A++ E KGE++KAVQLY K GDVA AL++CF+A G + GMF+ L+A+T++LG + +PQV
Sbjct: 928 LGDTEGAIKHYEDADTHRTEVPRMLLERGRLGELEAYIASRGDPELVKWWAKYCESIGDHAAARLFYARAADHLSLVRLACYAGDMNKAAAIVRDTGSVAAAYHLARQHEGRGEWQEAVALYARSRCYNHAMRLAKSHGMDAELMSFAMQSRPSLMVDAAQYFEDKGELDKAVQLYHKGGDVAHALEICFKA------GADGQTGMFELLRAITEELGQASGSTNPQV 1149
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S2RUZ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUZ9_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.190e-64 Identity = 113/224 (50.45%), Postives = 155/224 (69.20%), Query Frame = 1
Query: 1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQ 672
VGD + A++H+E A TH +VPRML +R R+ DLEEYI + ++ ELLKWW+ Y E+ G+F+KAR Y RAQD S++R+AC +G+ A I+ +SG A AAY LAR+LE EA+ +Y S +NHAIRLA++ G+D ELM FAL++ LM+ A+H E KG++EKAVQLYQK GD+ +ALD+CFRA G+GR MFD L+ + +L N +PQ
Sbjct: 750 VGDISSAVKHFEHADTHRTQVPRMLSDRKRLTDLEEYIARSSDPELLKWWAGYCEAHGQFDKARHFYYRAQDHFSLIRIACVNGETARAKQIIEESGDASAAYFLARYLEGHNEIQEAINYYAVSKCYNHAIRLARNFGLDGELMSFALKASEPLMIDCAQHFESKGDLEKAVQLYQKGGDIPKALDLCFRAG-----GQGRS-SMFDVLQTIAGELDENTNPQ 967
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S2CPX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPX6_9STRA) HSP 1 Score: 223 bits (567), Expect = 3.610e-64 Identity = 113/231 (48.92%), Postives = 159/231 (68.83%), Query Frame = 1
Query: 1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVE-------DLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQ 672
+GD GA++H+E+A TH EVPRMLF+ +V LEEYI ++ EL+KWW+ Y ES G+++KAR Y RAQ++ S+VR+AC + ++ A +IV ++ +A AAY+LAR+LE + EA+ +Y +S +NHAIRLAK+ G+DSELM +A++SRP+LMV A + E KGE EKAVQLYQK GD+ +ALD+CF+A G R MF+ LK + +DL SPQ
Sbjct: 352 IGDINGAVKHFELADTHRTEVPRMLFDLSQVSRDPKVLSKLEEYIAHSSDPELIKWWAGYCESIGQYDKARHFYHRAQNYFSLVRIACFNREIPRAKNIVEETNNAAAAYYLARYLEGMTEVQEAINYYAQSGCYNHAIRLAKNFGLDSELMSYAIKSRPSLMVECAVYFESKGEFEKAVQLYQKGGDIPKALDLCFKA------GSQGRTSMFEVLKNIANDLDDQTSPQ 576
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A4Q5XS05_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5XS05_9DELT) HSP 1 Score: 204 bits (518), Expect = 6.330e-61 Identity = 103/235 (43.83%), Postives = 146/235 (62.13%), Query Frame = 1
Query: 4 GDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGM-----------FDTLKAMTDDLGTNASPQV 675
G + A E Y++A EVPRMLF DRV++L +YI N LLKWW+ Y+ES +KA+++Y +A+D+LS+VR+AC D A +++ SG +AYH AR LE G EA++FY + F+H IRL K HG+D ELM +AL+S P MV AE+ E KGE +KA++L+ K D+A AL++CFR +G+E PG F+T+ A+ DLG N+SPQ+
Sbjct: 81 GQVSEATECYKLAAVDHVEVPRMLFYLDRVDELNDYIVHSENALLLKWWASYLESIDRLDKAKKYYAKAKDYLSLVRIACFQSDFTTAAEVITQSGDKASAYHFARQLEHAGEFQEAISFYALAGCFHHCIRLCKAHGIDGELMRYALKSTPVYMVQCAEYYEAKGEFDKAIELFYKGQDIAYALELCFR--IGEEMSTANAPGKKIAQHPYAAAAFETINAIAQDLGVNSSPQL 313
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A061REQ7_9CHLO (Intraflagellar transport protein 140-like (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061REQ7_9CHLO) HSP 1 Score: 211 bits (538), Expect = 3.900e-60 Identity = 105/219 (47.95%), Postives = 146/219 (66.67%), Query Frame = 1
Query: 19 AIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQV 675
AI YE++ TH EVPRMLFE +++E+L +YI + N +L KWW++Y ES G+F++AR HY A D+LSVVRL C D+E A IVN++ AA+HL R +EA G EAV FY+RS RF+HA+RLA+ HGM+ ELM ALQS P +M+ A +L ++GE KAVQLYQ+ G RALD+CF+ +F+ L+ + D+L T++ P +
Sbjct: 305 AIREYELSNTHFFEVPRMLFETNQIEELRKYIEKSNEPKLTKWWARYNESLGQFDEARNHYEAAGDYLSVVRLLCFQNDLESARAIVNETNDPAAAFHLGRQMEAQGIVKEAVMFYSRSKRFSHAVRLARKHGMNRELMNLALQSTPRVMIDTANYLSQQGEYGKAVQLYQRGGCQGRALDICFKG------------NLFEELELIADELNTDSDPSL 511
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S3GS04_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GS04_9STRA) HSP 1 Score: 210 bits (535), Expect = 5.500e-59 Identity = 101/218 (46.33%), Postives = 152/218 (69.72%), Query Frame = 1
Query: 19 AIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQ 672
AIEHY ++G EVPRMLF+ DRV++L +++ Q ++ LLKWW+ Y+ES ++KA+++Y++A+D+LS+VR+AC GD A +IV ++ +AYH AR LE G+ +A+ FY S +NH+IRLA+ + +D+ELM +AL+S PALM+ A H E++ E +KAVQLY K GD+ RALD+CFRA G++ ++D L + DLG ++SPQ
Sbjct: 1017 AIEHYGLSGNSHTEVPRMLFQLDRVDELGDFVLQSDDPVLLKWWAAYLESIERYDKAKKYYSKARDYLSLVRIACFKGDFNKAAEIVAETNDRASAYHFARQLENQGQYNDAITFYASSGCYNHSIRLARAYNLDTELMRYALKSTPALMIECAVHFEQRREFDKAVQLYHKGGDIPRALDLCFRA--GEDPSYANNTLVYDMLNTIAQDLGADSSPQ 1232 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2725.7452.1 >prot_H-paniculata_contig2725.7452.1 ID=prot_H-paniculata_contig2725.7452.1|Name=mRNA_H-paniculata_contig2725.7452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWback to top mRNA from alignment at H-paniculata_contig2725:2131..3406+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2725.7452.1 ID=mRNA_H-paniculata_contig2725.7452.1|Name=mRNA_H-paniculata_contig2725.7452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1276bp|location=Sequence derived from alignment at H-paniculata_contig2725:2131..3406+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2725:2131..3406+ >mRNA_H-paniculata_contig2725.7452.1 ID=mRNA_H-paniculata_contig2725.7452.1|Name=mRNA_H-paniculata_contig2725.7452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig2725:2131..3406+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |