prot_H-paniculata_contig27093.7415.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27093.7415.1
Unique Nameprot_H-paniculata_contig27093.7415.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.810e-14
Identity = 48/159 (30.19%), Postives = 89/159 (55.97%), Query Frame = 0
Query:    1 RSPLLANTSGLFAAIHSCVVIFDSIQGWTKIEEPGIITVYGVPMILTLFVGSYVMRGIRLLVIYEPKLRRRWGCYFREMNIFIG-LIAPTLVFQIVAWAMVPIFGLDRVARVIDSYLVPLEIITILSAAALLARKLGRTEDLFNVSTEILVVGGIALVS 158
            RSP+L   SGL   +     +  ++  +  +    I+ ++ +P+     V +Y++RG+R++V+Y P  R+RWG Y ++    +  L+   ++ ++ AW +V   GL RVA  + + +V ++ +  LSA+  L  +L RT+D+F VS EI   G  AL++
Sbjct:   43 RSPVLMTASGLAGVLAGSTAVSRTVM-FPGLRSLFILRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWGRYLKKEAAMVKVLLTAYVIVEVAAWIVVRHVGLARVASFMVT-VVKIDTVVTLSASLALFGQLRRTQDVFKVSLEIQRAGACALLT 199          
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Match: A0A6H5KX00_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX00_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 8.550e-14
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 0
Query:    1 RSPLLANTSGLFAAIHSCVVIFDSIQGWTK---IEEPGIITVYGVPMILTLFVGSYVMRGIRLLVIYEPKLRRRWGCYFREMNIFIGLIAPTLVFQIVAWAMVPIFGLDRVARVIDSYLVPLEIIT---ILSAAALLARKLGRTEDLFNVSTEILVVGGIAL 156
            RSPLLA T GL   +   V+IF     W     +   G+ ++   P +L +   + VM  +RLLV++ PKLR +WG + RE ++  GL+   ++ +   W+ V   GL R   V    LV LE+ T    + A  LL  +L + +DL ++ST+I VVG I L
Sbjct:   44 RSPLLACTLGLCITLRFEVLIFAHTLHWGHSGLVASDGVTSLIEFPALL-ISEFALVMSAVRLLVMFFPKLRAKWGRFTRERDLVYGLVCAYILMEGALWSGVAAVGLSRTVGV----LVTLELFTGSTTVVAGVLLGGRLNKVDDLLHMSTDIRVVGTILL 200          
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Match: A0A6H5KBN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBN3_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.090e-12
Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    1 RSPLLANTSGLFAAIHSCVVIFDSIQGWTKIEEPGIITVYGVPMILTLFVGSYVMRGIRLLVIYEPKLRRRWGCYFR-EMNIFIGLIAPTLVFQIVAWAMVPIFGLD 106
            RSPLLA TSGL   +     +   I    K+    I  +  VP++   F+G YVMRGIRLLV+Y P  R  WG +F  E+ +   L+    + +++AW+ V +FGL+
Sbjct:   62 RSPLLATTSGLVGVVLGAFAVARLIVIPDKLVVHSISLIIFVPLMELGFLGPYVMRGIRLLVMYNPATRTHWGRFFTSELAVVKILLVAFGIVEVIAWSAVLLFGLE 168          
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Match: D8LTR6_ECTSI (Developmental regulator FlbA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR6_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 2.300e-11
Identity = 51/164 (31.10%), Postives = 86/164 (52.44%), Query Frame = 0
Query:    1 RSPLLANTSGLFAAIHSCVVIFDSIQGWTKIEEPGIITVYGVPMIL---TLFVGSY--VMRGIRLLVIYEPKLRRRWGCYFREMNIFIGLIAPTLVFQIVAWAMVPIFGLDRVARVIDSYLVPLEII---TILSAAALLARKLGRTEDLFNVSTEILVVGGIAL 156
            RSPLLA T GL   +    ++F     W      G++  +GV  ++    L +  +  VM  +RLLV++ PKLR +WG + RE ++  GL+   ++ +   W+ V   G+ R   V+ +    LE+    T + A  L+  +L + +DL ++ST+I VVG + L
Sbjct:   44 RSPLLACTLGLCITLRFEFLLFAHTLHW---GHSGLVASHGVTNMIEFPVLLISEFALVMSAVRLLVMFFPKLRAKWGRFTREKDLVYGLVCAYILMEGALWSGVAAVGVSRTGGVLAT----LELFSGSTTVVAGVLVGGRLNKVDDLLHMSTDIRVVGMLLL 200          
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 8.610e-11
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    1 RSPLLANTSGLFAAIHSCVVIFDSIQGWTKIEEPGIITVYGVPMILTLFVGSYVMRGIRLLVIYEPKLRRRWGCYFREMNIFIGLIAPTLVFQIVAWAMVPIFG 104
            RSP+LA  SG    + S   I      +     P    +  VP++L+ F  +Y++RG+RLL+++ P+ R+RWG + RE N    ++A  LV Q+V W+ VP +G
Sbjct:  107 RSPMLAVMSGAIGILISGPEIIGMTLTYDMSAGPE--KILCVPLMLS-FTATYILRGVRLLIMFTPRSRQRWGSFLRERNFIPIVLAIFLVLQVVVWSFVPTYG 207          
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-8
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    1 RSPLLANTSGLFA----AIHSCVVIFDSIQGWTKIEEPGIITVYGVPMILTLFVGSYVMRGIRLLVIYEPKLRRRWGCYFREMNIFIGLIAPTLV 91
            RSPLL   SGL      A  +   + +S     ++    IITV   P++L  FVG+Y++RGIRLLV+Y P +R RWG YF +    + ++    V
Sbjct:   51 RSPLLGTVSGLAGVSVWAFATTGAVINSEVVNAQLAFAPIITV---PLVLVAFVGAYIIRGIRLLVMYNPHMRHRWGRYFNKETFMVKVVIVLFV 142          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27093.7415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LLA9_ECTSI1.810e-1430.19RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KX00_9PHAE8.550e-1435.19RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBN3_9PHAE1.090e-1238.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTR6_ECTSI2.300e-1131.10Developmental regulator FlbA n=1 Tax=Ectocarpus si... [more]
D7FYZ5_ECTSI8.610e-1135.58RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K976_9PHAE1.140e-837.89RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..132
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27093contigH-paniculata_contig27093:57..3285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27093.7415.1mRNA_H-paniculata_contig27093.7415.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27093 57..3286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27093.7415.1 ID=prot_H-paniculata_contig27093.7415.1|Name=mRNA_H-paniculata_contig27093.7415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
RSPLLANTSGLFAAIHSCVVIFDSIQGWTKIEEPGIITVYGVPMILTLFV
GSYVMRGIRLLVIYEPKLRRRWGCYFREMNIFIGLIAPTLVFQIVAWAMV
PIFGLDRVARVIDSYLVPLEIITILSAAALLARKLGRTEDLFNVSTEILV
VGGIALVSL
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