mRNA_H-paniculata_contig2706.7404.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 256 bits (653), Expect = 2.110e-72 Identity = 127/231 (54.98%), Postives = 166/231 (71.86%), Query Frame = 2
Query: 401 VISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLAN-TANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVR 1090
V+ K + SS+ R++FLVGLEGTGHHY +V D C + +PC N C + KALYP L P + Y ARR+LR+E+E LA A M EG+A + F CR+ GMMS+PNFNG K++QYVDFR+LAEEAERAGVD+R +YL+R AR ++VSDT+HN+YG TFM ESRAL+ NA V+ STF+ELGPGF TCF Y+ ++ EQ RVA F+AP E A R +M+++V+
Sbjct: 57 VVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKS-GMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGTFMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVK 286
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 251 bits (642), Expect = 2.210e-71 Identity = 123/232 (53.02%), Postives = 164/232 (70.69%), Query Frame = 2
Query: 398 MVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANR-MEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVR 1090
+V+ K + SS+ R++FLVGLEGTGHHYMADVL+ +CK + CP +C M K LYP L P+S N+Y AR++LR+EME LA + EG++T+V FG CR GMMSYPNFNG K++QYVDFR++AEEAERAGVD+R +YL+R A D++ SD+ H+NYG +F+ ESR LL N V+ STF+EL P F TCF Y + QA RVA F+AP A + A +++ V+
Sbjct: 97 VVVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQILSHVK 328
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 229 bits (584), Expect = 8.310e-65 Identity = 120/254 (47.24%), Postives = 163/254 (64.17%), Query Frame = 2
Query: 479 MADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANR-MEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVR------RPRRRQWSDKVDPYKDLWPSDSAKGLLVARLQQKLNAIERDQC 1219
MADVL+ +CK + CP +C M K LYP L PES N+Y AR++LR+EME LA + EG++T+V FG CR GMMSYPNFNG K++QYVDFR++AEEAERAGVD+R +YL+R A D++ SD+ H+NYG +F+ ESR LL N V+ STF+EL P F TCF Y + QA RVA F+AP + A + A +M+ V+ ++ W + + D K +V RLQQ+L+ +E+D C
Sbjct: 1 MADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGGSFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAAVVTRLQQRLDMVEKDVC 254
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.860e-25 Identity = 92/296 (31.08%), Postives = 144/296 (48.65%), Query Frame = 2
Query: 383 VANSSM-VISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYP---GLGAPESANSYLAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYG-------ET------FMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVRRPRRRQWSDKVDPYKDLWPSDSAKGLLVARLQQKLNAIERDQC 1219
V+NSS ++ K S FRL+F+ GLEGTGHHY+ L +M P GK +Y L ++ + + + M LA A + A C SYP +G K +QY+D ++AE AE AG+D R++YL R A++V++++T H + ET F+ R L + VL S E+GP FV C +D + +EQA +A F++P +++A + +V++ ++ S + DP P + A + V RLQ+KL+A E C
Sbjct: 131 VSNSSTAILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNM-NLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPC--------SYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKK------SSRTDPL----PFEDAYAV-VLRLQRKLDAFEHLYC 406
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 100 bits (249), Expect = 7.700e-19 Identity = 71/219 (32.42%), Postives = 103/219 (47.03%), Query Frame = 2
Query: 401 VISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPG------------LGAPESANSY---------LAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHI 994
++ K +++RL+F+ GLEG+GHH +L R K C ++G+ L+ L AP +A + L+ R+ E+ +R + G C GMMSYPNF G K Q D R+LAE AE GVD RI+ L RPA V+ S T H ++G ++ E+ L NA L++ + L P FV C YD +
Sbjct: 98 LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARR--CAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLGGC-----GMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFG-SWNTEAVVLEHNAQTLLAQLQSLDPAFVLCTEYDRL 308
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A7S3PR25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.180e-15 Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 2
Query: 410 KNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKAL-YP--GLGAP-ESANSYL--AARRQLRQEMEYLANTANRMEEGKAT-----MVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDT--KHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHIT 997
K + SK RL+F VGLEGTGHH ++ +L K + CK+ + +P G AP + + AA + E A+ +++ AT + + + + + SYP F G K++Q+ D LAE AE G+D R++ L R A ++++SD +H N G M E R L NA + +T + P F +C YD T
Sbjct: 413 KKTVFSKLRLVFFVGLEGTGHHLWQGIVMKLLKNKQLNAE--CKLNDLIMHPAGGCWAPWNNGKGFFCSAASESFKTGYEMAADAMMKLKASNATGTHMLNLVYRGWKGNCGSIASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHFNIGHPKMYEERVLENNAASIYTTIATMDPKFYSCTQYDDST 619
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A813BJ34_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BJ34_SYMMI) HSP 1 Score: 80.5 bits (197), Expect = 1.790e-12 Identity = 68/248 (27.42%), Postives = 115/248 (46.37%), Query Frame = 2
Query: 266 SSRVILYPQKREKEDTTHLTKSKSVMADNVLRVDTE-PHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDM------VGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
SSRV + P RE + + ++S++ + T PH A + V+S N R +F GLEGTGHH+ ++L RL IS + + + L+ +++ R L E++ + ++ +++ G ++ GMMSYPNF G + +Q D LA+ AE AG+DLRI+ L+R ++ S+ + Y + R + +L L P +VTC+ Y+
Sbjct: 22 SSRVPVPPADRESCEEGSVAAARSLLQSQATQTGTRTPHRFAVTKKVVSSN-----VRFVFFAGLEGTGHHFWQELLRRL-SIS-----HSADLSQELFNRQHGSLFSSTDERGREDL---AEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSELARS-YEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTYE 254
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A812H6X7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812H6X7_9DINO) HSP 1 Score: 79.3 bits (194), Expect = 3.820e-12 Identity = 66/236 (27.97%), Postives = 109/236 (46.19%), Query Frame = 2
Query: 305 EDTTHLTKSKSVMADNVLRVDTE-PHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQ-EMEYLANTANRMEEGKATMVGFGKCRNDM------VGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
ED + ++S++ T PH A ++K SSK R +F GLEGTGHH+ ++L RL IS + + PGL + ++ Q+R+ E++ + M++ ++ G ++ GMMSYPNF G + Q D LA+ AE AG+DLRI+ L+R ++ S+ + Y + R + +L L P +V+C+ Y+
Sbjct: 30 EDVSVAAAARSLLQSQNAHTGTRTPHRYA-----VTKKVVSSKIRFVFFAGLEGTGHHFWQEMLRRL-SISHSADLSQELFNRRHGPGL--------FSSSDEQVREASAEHVVELMSEMQKNLSSAPGCNVVALNVGGITRPSGMMSYPNFGGRDRMFQNPDMFTLAKLAEAAGIDLRIVLLTRQPASLVQSELDRS-YEKDLSHAVRKVSMTLSLLSEQLDLLDPAYVSCWSYE 250
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A1Q9EVB9_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EVB9_SYMMI) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 81/299 (27.09%), Postives = 134/299 (44.82%), Query Frame = 2
Query: 122 KLAGNI*PQGKRGV---WCSSLPSPAGTINIFVSTEMILVILESVSTFYDSSSRVILYPQKREKEDTTHLTKSKSVMADNVLRVDTE-PHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDM------VGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
+L GN G+RGV + S + SPA T T + S + SRV + P RE + + ++S++ + T PH A + V+S N R +F GLEGTGHH+ ++L RL IS + + + L+ +++ R L E++ + ++ +++ G ++ GMMSYPNF G + +Q D LA+ AE AG+DLRI+ L+R ++ S+ + Y + R + +L L P +VTC+ Y+
Sbjct: 212 ELMGNAAMAGERGVSTGFASDICSPAVTTAAPKRTASGKSRGPTASYW---ESRVPVPPADRESCEEGSVAAARSLLQSQATQTGTRTPHRFAVTKKVVSSN-----VRFVFFAGLEGTGHHFWQELLRRL-SIS-----HSADLSQELFNRQHGSLFSSTDERGREDL---AEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSELARS-YEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTYE 492
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A812KSC5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KSC5_9DINO) HSP 1 Score: 77.8 bits (190), Expect = 1.180e-11 Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 2
Query: 407 SKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPG-----LGAPE-SANSYLAARRQLRQEMEY-LANTANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
+K + SS+ R +F GLEG+GHH+ +++ RL P + +AL+ G A E S Y +L EME L++T +V + GMMSYPN G ++ + D LA+ AE AGVDLRI+ L+R ++ S + N Y + R + +L L P +V C+ Y+
Sbjct: 59 TKTATSSQVRFVFFAGLEGSGHHFWHEMIKRL------PINRSEDLSRALFDGQHGGFFNADEHSRGDYAEDIAKLMSEMEMNLSSTPG------CKVVALNGVEPQVSGMMSYPNMGGKDRAGRNPDIFALAKLAEAAGVDLRIVLLTRHPESMVQSMCERN-YEKDVAHAVREVAMTISLLSEQLELLDPSYVACWTYE 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2706.7404.1 >prot_H-paniculata_contig2706.7404.1 ID=prot_H-paniculata_contig2706.7404.1|Name=mRNA_H-paniculata_contig2706.7404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp MILVILESVSTFYDSSSRVILYPQKREKEDTTHLTKSKSVMADNVLRVDTback to top mRNA from alignment at H-paniculata_contig2706:12648..16293- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2706.7404.1 ID=mRNA_H-paniculata_contig2706.7404.1|Name=mRNA_H-paniculata_contig2706.7404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3646bp|location=Sequence derived from alignment at H-paniculata_contig2706:12648..16293- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2706:12648..16293- >mRNA_H-paniculata_contig2706.7404.1 ID=mRNA_H-paniculata_contig2706.7404.1|Name=mRNA_H-paniculata_contig2706.7404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at H-paniculata_contig2706:12648..16293- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |