mRNA_H-paniculata_contig2706.7404.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2706.7404.1
Unique NamemRNA_H-paniculata_contig2706.7404.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 2.110e-72
Identity = 127/231 (54.98%), Postives = 166/231 (71.86%), Query Frame = 2
Query:  401 VISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLAN-TANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVR 1090
            V+ K + SS+ R++FLVGLEGTGHHY  +V D  C  + +PC N C + KALYP L  P +   Y  ARR+LR+E+E LA   A  M EG+A +  F  CR+   GMMS+PNFNG  K++QYVDFR+LAEEAERAGVD+R +YL+R AR ++VSDT+HN+YG TFM ESRAL+ NA V+ STF+ELGPGF TCF Y+ ++  EQ  RVA F+AP E  A R   +M+++V+
Sbjct:   57 VVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKS-GMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGTFMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVK 286          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 2.210e-71
Identity = 123/232 (53.02%), Postives = 164/232 (70.69%), Query Frame = 2
Query:  398 MVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANR-MEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVR 1090
            +V+ K + SS+ R++FLVGLEGTGHHYMADVL+ +CK   + CP +C M K LYP L  P+S N+Y  AR++LR+EME LA      + EG++T+V FG CR    GMMSYPNFNG  K++QYVDFR++AEEAERAGVD+R +YL+R A D++ SD+ H+NYG +F+ ESR LL N  V+ STF+EL P F TCF Y  +    QA RVA F+AP    A + A +++  V+
Sbjct:   97 VVVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQILSHVK 328          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 8.310e-65
Identity = 120/254 (47.24%), Postives = 163/254 (64.17%), Query Frame = 2
Query:  479 MADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANR-MEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVR------RPRRRQWSDKVDPYKDLWPSDSAKGLLVARLQQKLNAIERDQC 1219
            MADVL+ +CK   + CP +C M K LYP L  PES N+Y  AR++LR+EME LA      + EG++T+V FG CR    GMMSYPNFNG  K++QYVDFR++AEEAERAGVD+R +YL+R A D++ SD+ H+NYG +F+ ESR LL N  V+ STF+EL P F TCF Y  +    QA RVA F+AP  + A + A +M+  V+         ++ W +     +     D  K  +V RLQQ+L+ +E+D C
Sbjct:    1 MADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGGSFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAAVVTRLQQRLDMVEKDVC 254          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.860e-25
Identity = 92/296 (31.08%), Postives = 144/296 (48.65%), Query Frame = 2
Query:  383 VANSSM-VISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYP---GLGAPESANSYLAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYG-------ET------FMMESRALLANADVLVSTFRELGPGFVTCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVRRPRRRQWSDKVDPYKDLWPSDSAKGLLVARLQQKLNAIERDQC 1219
            V+NSS  ++ K   S  FRL+F+ GLEGTGHHY+      L   +M   P     GK +Y     L   ++   +  +     + M  LA  A  +    A       C        SYP  +G  K +QY+D  ++AE AE AG+D R++YL R A++V++++T H  +        ET      F+   R L  +  VL S   E+GP FV C  +D +  +EQA  +A F++P +++A    + +V++ ++      S + DP     P + A  + V RLQ+KL+A E   C
Sbjct:  131 VSNSSTAILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNM-NLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPC--------SYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKK------SSRTDPL----PFEDAYAV-VLRLQRKLDAFEHLYC 406          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO)

HSP 1 Score: 100 bits (249), Expect = 7.700e-19
Identity = 71/219 (32.42%), Postives = 103/219 (47.03%), Query Frame = 2
Query:  401 VISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPG------------LGAPESANSY---------LAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHI 994
            ++ K    +++RL+F+ GLEG+GHH    +L R  K     C    ++G+ L+              L AP +A  +         L+  R+   E+       +R       +   G C     GMMSYPNF G  K  Q  D R+LAE AE  GVD RI+ L RPA  V+ S T H ++G ++  E+  L  NA  L++  + L P FV C  YD +
Sbjct:   98 LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARR--CAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLGGC-----GMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFG-SWNTEAVVLEHNAQTLLAQLQSLDPAFVLCTEYDRL 308          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A7S3PR25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.180e-15
Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 2
Query:  410 KNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKAL-YP--GLGAP-ESANSYL--AARRQLRQEMEYLANTANRMEEGKAT-----MVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDT--KHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYDHIT 997
            K +  SK RL+F VGLEGTGHH    ++ +L K   +     CK+   + +P  G  AP  +   +   AA    +   E  A+   +++   AT      + +   + +   + SYP F G  K++Q+ D   LAE AE  G+D R++ L R A ++++SD   +H N G   M E R L  NA  + +T   + P F +C  YD  T
Sbjct:  413 KKTVFSKLRLVFFVGLEGTGHHLWQGIVMKLLKNKQLNAE--CKLNDLIMHPAGGCWAPWNNGKGFFCSAASESFKTGYEMAADAMMKLKASNATGTHMLNLVYRGWKGNCGSIASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHFNIGHPKMYEERVLENNAASIYTTIATMDPKFYSCTQYDDST 619          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A813BJ34_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BJ34_SYMMI)

HSP 1 Score: 80.5 bits (197), Expect = 1.790e-12
Identity = 68/248 (27.42%), Postives = 115/248 (46.37%), Query Frame = 2
Query:  266 SSRVILYPQKREKEDTTHLTKSKSVMADNVLRVDTE-PHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDM------VGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
            SSRV + P  RE  +   +  ++S++     +  T  PH  A +  V+S N      R +F  GLEGTGHH+  ++L RL  IS     +   + + L+        +++    R  L    E++    +  ++  +++ G      ++       GMMSYPNF G  + +Q  D   LA+ AE AG+DLRI+ L+R    ++ S+   + Y +      R +     +L      L P +VTC+ Y+
Sbjct:   22 SSRVPVPPADRESCEEGSVAAARSLLQSQATQTGTRTPHRFAVTKKVVSSN-----VRFVFFAGLEGTGHHFWQELLRRL-SIS-----HSADLSQELFNRQHGSLFSSTDERGREDL---AEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSELARS-YEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTYE 254          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A812H6X7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812H6X7_9DINO)

HSP 1 Score: 79.3 bits (194), Expect = 3.820e-12
Identity = 66/236 (27.97%), Postives = 109/236 (46.19%), Query Frame = 2
Query:  305 EDTTHLTKSKSVMADNVLRVDTE-PHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQ-EMEYLANTANRMEEGKATMVGFGKCRNDM------VGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
            ED +    ++S++        T  PH  A     ++K   SSK R +F  GLEGTGHH+  ++L RL  IS     +     +   PGL        + ++  Q+R+   E++    + M++  ++  G      ++       GMMSYPNF G  +  Q  D   LA+ AE AG+DLRI+ L+R    ++ S+   + Y +      R +     +L      L P +V+C+ Y+
Sbjct:   30 EDVSVAAAARSLLQSQNAHTGTRTPHRYA-----VTKKVVSSKIRFVFFAGLEGTGHHFWQEMLRRL-SISHSADLSQELFNRRHGPGL--------FSSSDEQVREASAEHVVELMSEMQKNLSSAPGCNVVALNVGGITRPSGMMSYPNFGGRDRMFQNPDMFTLAKLAEAAGIDLRIVLLTRQPASLVQSELDRS-YEKDLSHAVRKVSMTLSLLSEQLDLLDPAYVSCWSYE 250          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A1Q9EVB9_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EVB9_SYMMI)

HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11
Identity = 81/299 (27.09%), Postives = 134/299 (44.82%), Query Frame = 2
Query:  122 KLAGNI*PQGKRGV---WCSSLPSPAGTINIFVSTEMILVILESVSTFYDSSSRVILYPQKREKEDTTHLTKSKSVMADNVLRVDTE-PHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANRMEEGKATMVGFGKCRNDM------VGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
            +L GN    G+RGV   + S + SPA T      T        + S +    SRV + P  RE  +   +  ++S++     +  T  PH  A +  V+S N      R +F  GLEGTGHH+  ++L RL  IS     +   + + L+        +++    R  L    E++    +  ++  +++ G      ++       GMMSYPNF G  + +Q  D   LA+ AE AG+DLRI+ L+R    ++ S+   + Y +      R +     +L      L P +VTC+ Y+
Sbjct:  212 ELMGNAAMAGERGVSTGFASDICSPAVTTAAPKRTASGKSRGPTASYW---ESRVPVPPADRESCEEGSVAAARSLLQSQATQTGTRTPHRFAVTKKVVSSN-----VRFVFFAGLEGTGHHFWQELLRRL-SIS-----HSADLSQELFNRQHGSLFSSTDERGREDL---AEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSELARS-YEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTYE 492          
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Match: A0A812KSC5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KSC5_9DINO)

HSP 1 Score: 77.8 bits (190), Expect = 1.180e-11
Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 2
Query:  407 SKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMIPCPNVCKMGKALYPG-----LGAPE-SANSYLAARRQLRQEMEY-LANTANRMEEGKATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRIIYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFVTCFYYD 988
            +K + SS+ R +F  GLEG+GHH+  +++ RL      P      + +AL+ G       A E S   Y     +L  EME  L++T          +V        + GMMSYPN  G  ++ +  D   LA+ AE AGVDLRI+ L+R    ++ S  + N Y +      R +     +L      L P +V C+ Y+
Sbjct:   59 TKTATSSQVRFVFFAGLEGSGHHFWHEMIKRL------PINRSEDLSRALFDGQHGGFFNADEHSRGDYAEDIAKLMSEMEMNLSSTPG------CKVVALNGVEPQVSGMMSYPNMGGKDRAGRNPDIFALAKLAEAAGVDLRIVLLTRHPESMVQSMCERN-YEKDVAHAVREVAMTISLLSEQLELLDPSYVACWTYE 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2706.7404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FMV3_ECTSI2.110e-7254.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FMV4_ECTSI2.210e-7153.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIA1_9PHAE8.310e-6547.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH94_9PHAE1.860e-2531.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0A0K6_9DINO7.700e-1932.42Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A7S3PR25_9STRA1.180e-1531.58Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A813BJ34_SYMMI1.790e-1227.42Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A812H6X7_9DINO3.820e-1227.97Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A1Q9EVB9_SYMMI1.100e-1127.09Uncharacterized protein n=2 Tax=Symbiodinium micro... [more]
A0A812KSC5_9DINO1.180e-1130.35Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2706contigH-paniculata_contig2706:12648..16293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score76.6
Seed ortholog evalue2.4e-11
Seed eggNOG ortholog44056.XP_009035729.1
KEGG koko:K10147,ko:K17506
KEGG Pathwayko04115,map04115
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons2
Model size3107
Cds size1011
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2706.7404.1prot_H-paniculata_contig2706.7404.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2706 14524..16073 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929814.1581724-UTR-H-paniculata_contig2706:12647..145231622929814.1581724-UTR-H-paniculata_contig2706:12647..14523Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2706 12648..14523 -
1691481023.0208235-UTR-H-paniculata_contig2706:12647..145231691481023.0208235-UTR-H-paniculata_contig2706:12647..14523Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2706 12648..14523 -
1622929814.2152123-UTR-H-paniculata_contig2706:16073..162931622929814.2152123-UTR-H-paniculata_contig2706:16073..16293Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2706 16074..16293 -
1691481023.0588012-UTR-H-paniculata_contig2706:16073..162931691481023.0588012-UTR-H-paniculata_contig2706:16073..16293Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2706 16074..16293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929814.1738217-CDS-H-paniculata_contig2706:14523..148661622929814.1738217-CDS-H-paniculata_contig2706:14523..14866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2706 14524..14866 -
1691481023.0334623-CDS-H-paniculata_contig2706:14523..148661691481023.0334623-CDS-H-paniculata_contig2706:14523..14866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2706 14524..14866 -
1622929814.1988685-CDS-H-paniculata_contig2706:15405..160731622929814.1988685-CDS-H-paniculata_contig2706:15405..16073Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2706 15406..16073 -
1691481023.0434628-CDS-H-paniculata_contig2706:15405..160731691481023.0434628-CDS-H-paniculata_contig2706:15405..16073Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2706 15406..16073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2706.7404.1

>prot_H-paniculata_contig2706.7404.1 ID=prot_H-paniculata_contig2706.7404.1|Name=mRNA_H-paniculata_contig2706.7404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp
MILVILESVSTFYDSSSRVILYPQKREKEDTTHLTKSKSVMADNVLRVDT
EPHIVANSSMVISKNSFSSKFRLIFLVGLEGTGHHYMADVLDRLCKISMI
PCPNVCKMGKALYPGLGAPESANSYLAARRQLRQEMEYLANTANRMEEGK
ATMVGFGKCRNDMVGMMSYPNFNGIAKSVQYVDFRILAEEAERAGVDLRI
IYLSRPARDVIVSDTKHNNYGETFMMESRALLANADVLVSTFRELGPGFV
TCFYYDHITSEEQAERVADFVAPTEQLAHRFATRMVKSVRRPRRRQWSDK
VDPYKDLWPSDSAKGLLVARLQQKLNAIERDQCDLL*
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mRNA from alignment at H-paniculata_contig2706:12648..16293-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2706.7404.1 ID=mRNA_H-paniculata_contig2706.7404.1|Name=mRNA_H-paniculata_contig2706.7404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3646bp|location=Sequence derived from alignment at H-paniculata_contig2706:12648..16293- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTGCATTTTCTTGATAATGGCAAGGGCGAGAAATGCCGAGTGTAGCGAC TCCGACAAATCTCGTTCTAGATATCTCCTTCAACGTATCTTTCAGCAGCT GTTTTCGCCTCGTTGTCCGGAAAGCTGGCTGGCAATATATAGCCCCAGGG GAAGAGGGGTGTGTGGTGTAGCTCTCTGCCATCTCCTGCAGGTACGATTA ATATCTTCGTGTCAACAGAGATGATATTGGTAATCTTGGAATCCGTCTCT ACATTTTACGATTCGTCCTCTCGCGTCATATTGTATCCACAGAAGAGAGA GAAGGAGGACACCACACACCTCACCAAAAGCAAGTCCGTCATGGCGGACA ACGTGCTCCGCGTCGACACGGAGCCGCACATTGTAGCGAACTCCAGCATG GTAATCTCGAAAAACTCTTTCAGCTCGAAGTTCCGCCTTATTTTTCTCGT GGGCCTCGAAGGCACGGGGCACCACTATATGGCCGACGTGCTCGACCGCC TATGCAAAATATCGATGATACCATGCCCAAACGTCTGCAAGATGGGGAAG GCGCTGTACCCTGGTTTAGGTGCCCCAGAGAGCGCGAACAGCTATCTTGC CGCACGGCGGCAACTCCGACAAGAGATGGAATATCTAGCAAATACAGCCA ACAGAATGGAGGAGGGGAAAGCGACGATGGTGGGCTTCGGCAAGTGCCGT AATGACATGGTCGGCATGATGTCGTACCCTAACTTTAATGGCATCGCTAA ATCTGTTCAGTACGTCGACTTCAGGATCTTAGCGGAGGAGGCGGAGCGCG CGGGCGTGGATCTGCGAATAATATATCTCTCGCGACCTGCCCGAGATGTT ATCGTCTCGGACACCAAACACAACAACTATGGCGAAACGTGGGTGCCCAT CCTTGGAGTTTCGCATGTATTGTTTATGGAGACTTTGGGTGCTGGTTCGG TATTTTGTCTGGACTTTCGTTTCCAGGAAGTGTTCGTGAGTACTCTTGCT CGTAAAACGTCATGCGGGGAGCAGTTTGTCTCGTGTGTCTTGCTGTTCGT AGGAATGCGCTTATTCGCTGTTGTCTCTTGTGCGCGTTCCCTTATCGCCA TAGCGTGACCCGAGTTTAAATGCGAGAGGAGTGTGGCAATGTGTATTCAC GCGGAGAGCACTCATGTTCACTGGTGCAGCTGTGTAGCAGTAGAGCCATG GAACGTGGTGATACAAGTCACCTTCGGGCTTTGCAGCCCTCCACGCATAA GCACACTTTGAACAAGCCGCCAGCAAACTTCATGTAGGTTCATGACTAAT TCGGCGTAGACTTTTGATCAGGTAAACAAATAGTGTATGTTCCCCTTATG TTTTTCTTTTTTTTTCACCGAGTTATATCCCCCCCTTCGCTCCCCGGGCG CTCACTAACCCTCCGCCGCCGCTGTAGATTTATGATGGAGTCCCGCGCCC TCTTGGCAAATGCGGACGTATTGGTATCCACCTTTCGCGAGCTGGGCCCA GGTTTCGTCACTTGTTTCTACTACGACCACATCACTAGCGAGGAGCAGGC AGAACGTGTGGCGGACTTCGTGGCACCGACCGAACAGCTCGCACACCGAT TTGCCACGCGCATGGTCAAGTCGGTGAGACGTCCGAGGAGGAGGCAATGG AGCGACAAAGTTGATCCTTACAAGGATTTGTGGCCCTCTGACAGTGCTAA GGGCTTGCTCGTGGCGCGGCTGCAGCAGAAACTGAATGCTATCGAGCGGG ACCAATGCGACCTGTTGTGATTGGATGAAGCCGTTTCTTATTTTCTGGTC GTGGGTCCTGGGCCTGGAATGGGGTTTCCGGAACTGTTCTTTTTCTAGAG CTTCTTGTAGTAGGTGCAGATTCTGTGTGTGTGCTGTGAAAGGAGCTTCG TCTGTTGTGGTTGTGTTATGTGGGCTGTATTCGCGAATGGAATGTTGGGT AATGTAAGGCGTGGGCGAAAAGGCACGGCATGAGTGTTGTCAAAAATATT TCCCCGCAATCCTTAGCTTTGTATCAACGACCGAGATGATCAAGTAGGAA TTAGTGTTTGTTACGTGCCAAGTCGTGTCGACTGTTACCAGTTTCATCAG CTTTAGCGGTAGAGGACGAAGGGCCGGCGAGTTTAATCACATGTAGAGGC AGACCGCATCGTGCACCTCCACGTGTGCGTTGATACCTGTGCTCTTTCCG CCTTTCCCGTGTGCGAGGTGTGGAACGATGGAACAACGCTTCGCCTTGTG TGAGTTCTCCATATCGATTTTGGCCCAGTCTCCGTGCAGATGAAACACGA ATCGTACGACGGAGTGTGCTGTCACGGAAGGGTAGGAGGGGCAATTGGTG TGTTACGCGTTTACTCATGGTTATTCCCACATTCCTTGCGCTTGGCAAGA AGGCGTATCCGAATGTCCCGCAATTCAATTTGTCCACAGCAGAAGCATTG AGGTATAGCGAGTTTTCAAATAGTTCTTGGCTCCGTTTCGAGTTCATGGC ACAAGTATTTTATGGTGGGTTGGTGGGTTGGTGGGTTGGTCGGTTGCTGT CAAGACAGATCGTTGCGTTGGGCGTGGTCCTGCGGGTGACTATGCTTCCA GTGGTAAATCTTTCTGAAATAGAGCCGTCGCGTTGATGGCTCATCATTAG GCATAGAAGTGATATAGGAACGAAGTGCCGAAGGGAAGGAACGTGAGAGT GCCAAAAAGCGAGCCAATCTTATTCGCGAGAACGTTGGGGGTGTCAGATT GGTGCGGCCGGGGGGGGTCCAGTAATACTGGAGACGTTGCCGACGGGAGA CGGTTGGTCTTGGAGAGAAATGTGCTATCGCTGTTTCGGACTATATTTTT TCTGGGCTGTCCTTGCGATTTAGTTGAAGCTCGCTGCTTTCAGCTGATGG AGTTTGACAACGGGTATAGTGTACGTGGTATTTTGTTGCAATAGTGCTTA ATTGGAACGTTGAAAATATGTTCGTGCGTGAAGCTCTCCGTAAAAAGAGA TTCGCCCAAACGATGGGTTTACGTGACTCATGCATGTGAGCGGAGGAGGA TCAGGGGAGCAGTGCGTATCGTTGAACGGGTTATGTGAACGGCTAGAGGC GTTGCGAAAGGCCGTATCTACGAATCGATATCTCATAGCTCGGAAATCAT GTGCGTCATCGAGTGTTTTGGTGTCACGGTATTGTATTGTTTTGTACAGG TGCGATTGAAAAGGTGTGGCAGGTGGGTACCTTTGTTTTACGTTAGTTTT CGTGTCAGGATTGTAGTCGGGGTTTTTTTCCCTTCTGGTAGATAGATAAA TGTGTCGCCGTTATTTGTGGCCATTCTTCAGATGCGAGATCTATTGTAGT TAATATTGCACGAATTGGCGGAGACGACGACATCGTGCGCAAGTTAGATT TAAAAGGTTTGAGTCTTGTGTTTCAACGGCAGTTTATCCTTAGCTGGACA TATCCTGACGCATGTATCCCACGTTTGCACCTCGATAGACCACGCGTAAA TGTACATCACACGTTCGCTGAAGTGGTATTATGCTTTGATTTTGATGTAC ATACGCTTACAAGCCTGGACCTCACGGGGAACACTAAAGTCAACCAAGAG CTCATACCCGATCGTGTCCCTTCATCTTTTCTCGACAATTTCGACA
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Coding sequence (CDS) from alignment at H-paniculata_contig2706:12648..16293-

>mRNA_H-paniculata_contig2706.7404.1 ID=mRNA_H-paniculata_contig2706.7404.1|Name=mRNA_H-paniculata_contig2706.7404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at H-paniculata_contig2706:12648..16293- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATATTGGTAATCTTGGAATCCGTCTCTACATTTTACGATTCGTCCTC
TCGCGTCATATTGTATCCACAGAAGAGAGAGAAGGAGGACACCACACACC
TCACCAAAAGCAAGTCCGTCATGGCGGACAACGTGCTCCGCGTCGACACG
GAGCCGCACATTGTAGCGAACTCCAGCATGGTAATCTCGAAAAACTCTTT
CAGCTCGAAGTTCCGCCTTATTTTTCTCGTGGGCCTCGAAGGCACGGGGC
ACCACTATATGGCCGACGTGCTCGACCGCCTATGCAAAATATCGATGATA
CCATGCCCAAACGTCTGCAAGATGGGGAAGGCGCTGTACCCTGGTTTAGG
TGCCCCAGAGAGCGCGAACAGCTATCTTGCCGCACGGCGGCAACTCCGAC
AAGAGATGGAATATCTAGCAAATACAGCCAACAGAATGGAGGAGGGGAAA
GCGACGATGGTGGGCTTCGGCAAGTGCCGTAATGACATGGTCGGCATGAT
GTCGTACCCTAACTTTAATGGCATCGCTAAATCTGTTCAGTACGTCGACT
TCAGGATCTTAGCGGAGGAGGCGGAGCGCGCGGGCGTGGATCTGCGAATA
ATATATCTCTCGCGACCTGCCCGAGATGTTATCGTCTCGGACACCAAACA
CAACAACTATGGCGAAACATGATATTGGTAATCTTGGAATCCGTCTCTAC
ATTTTACGATTCGTCCTCTCGCGTCATATTGTATCCACAGAAGAGAGAGA
AGGAGGACACCACACACCTCACCAAAAGCAAGTCCGTCATGGCGGACAAC
GTGCTCCGCGTCGACACGGAGCCGCACATTGTAGCGAACTCCAGCATGGT
AATCTCGAAAAACTCTTTCAGCTCGAAGTTCCGCCTTATTTTTCTCGTGG
GCCTCGAAGGCACGGGGCACCACTATATGGCCGACGTGCTCGACCGCCTA
TGCAAAATATCGATGATACCATGCCCAAACGTCTGCAAGATGGGGAAGGC
GCTGTACCCTGGTTTAGGTGCCCCAGAGAGCGCGAACAGCTATCTTGCCG
CACGGCGGCAACTCCGACAAGAGATGGAATATCTAGCAAATACAGCCAAC
AGAATGGAGGAGGGGAAAGCGACGATGGTGGGCTTCGGCAAGTGCCGTAA
TGACATGGTCGGCATGATGTCGTACCCTAACTTTAATGGCATCGCTAAAT
CTGTTCAGTACGTCGACTTCAGGATCTTAGCGGAGGAGGCGGAGCGCGCG
GGCGTGGATCTGCGAATAATATATCTCTCGCGACCTGCCCGAGATGTTAT
CGTCTCGGACACCAAACACAACAACTATGGCGAAACATTTATGATGGAGT
CCCGCGCCCTCTTGGCAAATGCGGACGTATTGGTATCCACCTTTCGCGAG
CTGGGCCCAGGTTTCGTCACTTGTTTCTACTACGACCACATCACTAGCGA
GGAGCAGGCAGAACGTGTGGCGGACTTCGTGGCACCGACCGAACAGCTCG
CACACCGATTTGCCACGCGCATGGTCAAGTCGGTGAGACGTCCGAGGAGG
AGGCAATGGAGCGACAAAGTTGATCCTTACAAGGATTTGTGGCCCTCTGA
CAGTGCTAAGGGCTTGCTCGTGGCGCGGCTGCAGCAGAAACTGAATGCTA
TCGAGCGGGACCAATGCGACCTGTTGTGAATTTATGATGGAGTCCCGCGC
CCTCTTGGCAAATGCGGACGTATTGGTATCCACCTTTCGCGAGCTGGGCC
CAGGTTTCGTCACTTGTTTCTACTACGACCACATCACTAGCGAGGAGCAG
GCAGAACGTGTGGCGGACTTCGTGGCACCGACCGAACAGCTCGCACACCG
ATTTGCCACGCGCATGGTCAAGTCGGTGAGACGTCCGAGGAGGAGGCAAT
GGAGCGACAAAGTTGATCCTTACAAGGATTTGTGGCCCTCTGACAGTGCT
AAGGGCTTGCTCGTGGCGCGGCTGCAGCAGAAACTGAATGCTATCGAGCG
GGACCAATGCGACCTGTTGTGA
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