prot_H-paniculata_contig26953.7375.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26953.7375.1
Unique Nameprot_H-paniculata_contig26953.7375.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.060e-50
Identity = 96/246 (39.02%), Postives = 148/246 (60.16%), Query Frame = 0
Query:    3 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 247
            Y   IL+R+G+E+A P  +P  G ++  +   D  L  +  +++Q I GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:   36 YARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 280          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.330e-47
Identity = 97/246 (39.43%), Postives = 149/246 (60.57%), Query Frame = 0
Query:    3 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 247
            Y   IL+R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:  473 YARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 717          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.350e-45
Identity = 103/251 (41.04%), Postives = 156/251 (62.15%), Query Frame = 0
Query:    1 HKYVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTK-STTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNK-RLVINHVSSQHQLSDVLTKQLD 248
            HKYV +IL ++ + +  PA +P  G ++ Q+  N   L ++  K YQ IVGS+ FLT  TR++I Y+V    R M+ P+  +M+  KR+LRY R  P++P+K+R+  ++   Y DAS+ G+ E   K S+TG  F  A  +V   S+LQ++TA SS  AE++A+AT A++ IYL  +L ELG+     + +  DS GA+  A N+ F  RSK I  R+ +LRQ N NK  +V+  V S+ QL+D+LTK L+
Sbjct:  440 HKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFP-CGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQ-NVNKGNIVLKFVRSEEQLADILTKHLE 688          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.660e-45
Identity = 94/240 (39.17%), Postives = 146/240 (60.83%), Query Frame = 0
Query:    9 KRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 247
            +R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:  638 ERYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 876          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5KY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY35_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.450e-44
Identity = 94/244 (38.52%), Postives = 144/244 (59.02%), Query Frame = 0
Query:    3 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTK 245
            Y    L+R+G+E+A P  +P  G ++  +   D QL+ +   ++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P LPI Y+K  F    ++++S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL   A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF   R+  K  R+ + H  S   L+D+ TK
Sbjct:  333 YARDTLQRYGMEQANPVSTPGYGAELSTEQPQDQQLEPEDKHRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPGLPIVYKKGQFRLSCFTESSFGANPDNG-RSTTGYMFFLGGGLISYGAKAQTLAAQNTVEAELQALGFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFPRELTKGHRITL-HQPSATMLADIATK 574          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5K8X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X2_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 8.120e-42
Identity = 89/239 (37.24%), Postives = 138/239 (57.74%), Query Frame = 0
Query:   10 RFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 247
            R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+  + QCTR+ + Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  F     L+   +  Q + A ++ E EL AL+  A + +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI   F  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:   22 RYGMEQANPVSTPGYGAELPTEQPQDQLLGPEDKQRFQAITGSLLCVAQCTRYHLSYAVHQPTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDIG-RSTTGYLFCVGGGLIGYGAKAQTLAAQNTVEVELQALSFSACEAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIRFFFFFLRELTKGHRITLHHQPSATMLADIATKHL 259          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5JN55_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN55_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.280e-41
Identity = 95/247 (38.46%), Postives = 143/247 (57.89%), Query Frame = 0
Query:    3 YVYSILKRFGIEE-ATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 247
            YV  IL   G  E A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   + R +S TG  F     L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  L +  K  R+ ++H  S   L+D+ TK L
Sbjct:  549 YVDDILSTGGNNEIANPVSTPGYGAELSTEQPQDQLLGTEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNR-RSPTGYLFSLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLGELTKRHRITLHHQPSATMLADIATKHL 794          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 3.720e-41
Identity = 88/219 (40.18%), Postives = 134/219 (61.19%), Query Frame = 0
Query:    3 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLR 220
            Y   IL+R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR
Sbjct: 1252 YARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLR 1469          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A0J7KMA5_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KMA5_LASNI)

HSP 1 Score: 144 bits (362), Expect = 3.110e-38
Identity = 89/247 (36.03%), Postives = 142/247 (57.49%), Query Frame = 0
Query:    2 KYVYSILKRFGIEEATPAKSPALGKVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKN-NFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 247
            +Y+  +L++F + E+    +PA+ K   +   + Q  ++ + ++++ VGS+ F    TR DI ++VS  +RFM+ P+      IKRILRY +   ++ I YR N N E + YSDA Y    +TR KST+G     A+  V   S  Q+I A S+TEAE VA A   KQ ++L NLL  +   Q S   +  D++GAL +  N     R+KHI +R+ ++R     K + +++V S+ QL+D+LTK+L
Sbjct:   18 QYIKRVLEKFRMTESKAVTTPAVAKEYLENAQEEQFSEKSSTEFRSAVGSLMFTAVATRPDIMFAVSSVSRFMAKPTAGAWQQIKRILRYLKGTTSMGITYRANGNQELIAYSDADYANCVQTR-KSTSGLVLILANGPVVWTSQQQQIVARSTTEAEYVAAAEATKQVLWLRNLLKSIDIDQ-STTTLYVDNQGALKIVENQEHHRRTKHIDVRYHLIRDHTMKKDITVDYVPSEEQLADILTKRL 262          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: I1Q6H0_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1Q6H0_ORYGL)

HSP 1 Score: 144 bits (363), Expect = 3.540e-38
Identity = 96/254 (37.80%), Postives = 142/254 (55.91%), Query Frame = 0
Query:    2 KYVYSILKRFGIEEATPAKSPALGKVMQQIGNDTQLDKQGT----KQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKN-NFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQLDPR 250
            KYV  ILK+FG+E+A P K+P              LD+ G     K Y++++GS+ +L   +R +I  SV   ARF + P + ++IA+KRILRY    PNL + Y K  +FE +GYSD  Y G +  R KSTTG+  F    LV   S  Q   A S+ EAE VA  +C  Q +++   L + G+   +K+ +L D++ A+ +A+N    SR+KHI IR   LR       + + HV ++ QL+D+ TK LD +
Sbjct:   34 KYVNDILKKFGMEDAKPIKTPM------PTNGHLDLDENGKCVDQKVYRSMIGSLLYLC-ASRPNIMLSVCMCARFQAEPKECHLIAVKRILRYSVHTPNLGLWYPKGCDFELLGYSDPDYAGCKVDR-KSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCAQLLWMKQTLKDFGYN-FTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDICLTHVRTESQLADIFTKPLDEK 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC04_9PHAE3.060e-5039.02Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE1.330e-4739.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J897_9PHAE1.350e-4541.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4S9_9PHAE2.660e-4539.17CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KY35_9PHAE1.450e-4438.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8X2_9PHAE8.120e-4237.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN55_9PHAE1.280e-4138.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE3.720e-4140.18Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A0J7KMA5_LASNI3.110e-3836.03Integrase core domain protein n=1 Tax=Lasius niger... [more]
I1Q6H0_ORYGL3.540e-3837.80Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 29..247
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 29..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26953contigH-paniculata_contig26953:2267..3022 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26953.7375.1mRNA_H-paniculata_contig26953.7375.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26953 2267..3022 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26953.7375.1 ID=prot_H-paniculata_contig26953.7375.1|Name=mRNA_H-paniculata_contig26953.7375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
HKYVYSILKRFGIEEATPAKSPALGKVMQQIGNDTQLDKQGTKQYQAIVG
SITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPI
KYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRIT
ATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLA
SNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQLDPR
VL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like