mRNA_H-paniculata_contig26953.7375.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig26953.7375.1
Unique NamemRNA_H-paniculata_contig26953.7375.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.060e-50
Identity = 96/246 (39.02%), Postives = 148/246 (60.16%), Query Frame = 1
Query:    7 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 741
            Y   IL+R+G+E+A P  +P  G ++  +   D  L  +  +++Q I GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:   36 YARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 280          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.330e-47
Identity = 97/246 (39.43%), Postives = 149/246 (60.57%), Query Frame = 1
Query:    7 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 741
            Y   IL+R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:  473 YARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 717          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.350e-45
Identity = 103/251 (41.04%), Postives = 156/251 (62.15%), Query Frame = 1
Query:    1 HKYVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTK-STTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNK-RLVINHVSSQHQLSDVLTKQLD 744
            HKYV +IL ++ + +  PA +P  G ++ Q+  N   L ++  K YQ IVGS+ FLT  TR++I Y+V    R M+ P+  +M+  KR+LRY R  P++P+K+R+  ++   Y DAS+ G+ E   K S+TG  F  A  +V   S+LQ++TA SS  AE++A+AT A++ IYL  +L ELG+     + +  DS GA+  A N+ F  RSK I  R+ +LRQ N NK  +V+  V S+ QL+D+LTK L+
Sbjct:  440 HKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFP-CGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQ-NVNKGNIVLKFVRSEEQLADILTKHLE 688          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.660e-45
Identity = 94/240 (39.17%), Postives = 146/240 (60.83%), Query Frame = 1
Query:   25 KRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 741
            +R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:  638 ERYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 876          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5KY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY35_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.450e-44
Identity = 94/244 (38.52%), Postives = 144/244 (59.02%), Query Frame = 1
Query:    7 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTK 735
            Y    L+R+G+E+A P  +P  G ++  +   D QL+ +   ++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P LPI Y+K  F    ++++S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL   A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF   R+  K  R+ + H  S   L+D+ TK
Sbjct:  333 YARDTLQRYGMEQANPVSTPGYGAELSTEQPQDQQLEPEDKHRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPGLPIVYKKGQFRLSCFTESSFGANPDNG-RSTTGYMFFLGGGLISYGAKAQTLAAQNTVEAELQALGFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFPRELTKGHRITL-HQPSATMLADIATK 574          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5K8X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X2_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 8.120e-42
Identity = 89/239 (37.24%), Postives = 138/239 (57.74%), Query Frame = 1
Query:   28 RFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 741
            R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+  + QCTR+ + Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  F     L+   +  Q + A ++ E EL AL+  A + +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI   F  LR+  K  R+ ++H  S   L+D+ TK L
Sbjct:   22 RYGMEQANPVSTPGYGAELPTEQPQDQLLGPEDKQRFQAITGSLLCVAQCTRYHLSYAVHQPTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDIG-RSTTGYLFCVGGGLIGYGAKAQTLAAQNTVEVELQALSFSACEAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIRFFFFFLRELTKGHRITLHHQPSATMLADIATKHL 259          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5JN55_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN55_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.280e-41
Identity = 95/247 (38.46%), Postives = 143/247 (57.89%), Query Frame = 1
Query:    7 YVYSILKRFGIEE-ATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 741
            YV  IL   G  E A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   + R +S TG  F     L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  L +  K  R+ ++H  S   L+D+ TK L
Sbjct:  549 YVDDILSTGGNNEIANPVSTPGYGAELSTEQPQDQLLGTEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNR-RSPTGYLFSLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLGELTKRHRITLHHQPSATMLADIATKHL 794          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 3.720e-41
Identity = 88/219 (40.18%), Postives = 134/219 (61.19%), Query Frame = 1
Query:    7 YVYSILKRFGIEEATPAKSPALG-KVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLR 660
            Y   IL+R+G+E+A P  +P  G ++  +   D  L  +  +++QAI GS+ +L QCTR+D+ Y+V Q  R  + P+Q +M A K +LRY R  P+LPI Y+K  F    ++D+S+G   +   +STTG  FF    L+   +  Q + A ++ EAEL AL+  A++ +Y+SN + E+G+     V +  DS GAL +ASNA FSSR+KHI +RF  LR
Sbjct: 1252 YARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLR 1469          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: A0A0J7KMA5_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KMA5_LASNI)

HSP 1 Score: 144 bits (362), Expect = 3.110e-38
Identity = 89/247 (36.03%), Postives = 142/247 (57.49%), Query Frame = 1
Query:    4 KYVYSILKRFGIEEATPAKSPALGKVMQQIGNDTQLDKQGTKQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKN-NFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQL 741
            +Y+  +L++F + E+    +PA+ K   +   + Q  ++ + ++++ VGS+ F    TR DI ++VS  +RFM+ P+      IKRILRY +   ++ I YR N N E + YSDA Y    +TR KST+G     A+  V   S  Q+I A S+TEAE VA A   KQ ++L NLL  +   Q S   +  D++GAL +  N     R+KHI +R+ ++R     K + +++V S+ QL+D+LTK+L
Sbjct:   18 QYIKRVLEKFRMTESKAVTTPAVAKEYLENAQEEQFSEKSSTEFRSAVGSLMFTAVATRPDIMFAVSSVSRFMAKPTAGAWQQIKRILRYLKGTTSMGITYRANGNQELIAYSDADYANCVQTR-KSTSGLVLILANGPVVWTSQQQQIVARSTTEAEYVAAAEATKQVLWLRNLLKSIDIDQ-STTTLYVDNQGALKIVENQEHHRRTKHIDVRYHLIRDHTMKKDITVDYVPSEEQLADILTKRL 262          
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Match: I1Q6H0_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1Q6H0_ORYGL)

HSP 1 Score: 144 bits (363), Expect = 3.540e-38
Identity = 96/254 (37.80%), Postives = 142/254 (55.91%), Query Frame = 1
Query:    4 KYVYSILKRFGIEEATPAKSPALGKVMQQIGNDTQLDKQGT----KQYQAIVGSITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPIKYRKN-NFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRITATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLASNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQLDPR 750
            KYV  ILK+FG+E+A P K+P              LD+ G     K Y++++GS+ +L   +R +I  SV   ARF + P + ++IA+KRILRY    PNL + Y K  +FE +GYSD  Y G +  R KSTTG+  F    LV   S  Q   A S+ EAE VA  +C  Q +++   L + G+   +K+ +L D++ A+ +A+N    SR+KHI IR   LR       + + HV ++ QL+D+ TK LD +
Sbjct:   34 KYVNDILKKFGMEDAKPIKTPM------PTNGHLDLDENGKCVDQKVYRSMIGSLLYLC-ASRPNIMLSVCMCARFQAEPKECHLIAVKRILRYSVHTPNLGLWYPKGCDFELLGYSDPDYAGCKVDR-KSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCAQLLWMKQTLKDFGYN-FTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDICLTHVRTESQLADIFTKPLDEK 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26953.7375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC04_9PHAE3.060e-5039.02Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE1.330e-4739.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J897_9PHAE1.350e-4541.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4S9_9PHAE2.660e-4539.17CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KY35_9PHAE1.450e-4438.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8X2_9PHAE8.120e-4237.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN55_9PHAE1.280e-4138.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE3.720e-4140.18Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A0J7KMA5_LASNI3.110e-3836.03Integrase core domain protein n=1 Tax=Lasius niger... [more]
I1Q6H0_ORYGL3.540e-3837.80Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26953contigH-paniculata_contig26953:2267..3022 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score148.3
Seed ortholog evalue4.9e-33
Seed eggNOG ortholog4538.ORGLA06G0273300.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3INKC@38820,3M2IR@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size756
Cds size756
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929809.960795-CDS-H-paniculata_contig26953:2266..30221622929809.960795-CDS-H-paniculata_contig26953:2266..3022Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26953 2267..3022 -
1691481020.9424381-CDS-H-paniculata_contig26953:2266..30221691481020.9424381-CDS-H-paniculata_contig26953:2266..3022Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26953 2267..3022 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26953.7375.1prot_H-paniculata_contig26953.7375.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig26953 2267..3022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig26953.7375.1

>prot_H-paniculata_contig26953.7375.1 ID=prot_H-paniculata_contig26953.7375.1|Name=mRNA_H-paniculata_contig26953.7375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
HKYVYSILKRFGIEEATPAKSPALGKVMQQIGNDTQLDKQGTKQYQAIVG
SITFLTQCTRFDICYSVSQAARFMSMPSQDNMIAIKRILRYPRLQPNLPI
KYRKNNFEQMGYSDASYGGTEETRTKSTTGSKFFFASELVYLFSSLQRIT
ATSSTEAELVALATCAKQGIYLSNLLMELGWTQLSKVKVLYDSKGALHLA
SNANFSSRSKHIVIRFAVLRQWNKNKRLVINHVSSQHQLSDVLTKQLDPR
VL
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mRNA from alignment at H-paniculata_contig26953:2267..3022-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig26953.7375.1 ID=mRNA_H-paniculata_contig26953.7375.1|Name=mRNA_H-paniculata_contig26953.7375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=756bp|location=Sequence derived from alignment at H-paniculata_contig26953:2267..3022- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACAAGTACGTATATTCTATTCTGAAACGATTTGGAATAGAAGAGGCTAC TCCAGCCAAAAGCCCAGCATTAGGAAAGGTTATGCAGCAAATCGGTAACG ACACCCAGCTGGACAAGCAAGGAACCAAGCAGTATCAAGCTATCGTGGGG AGCATCACCTTCCTCACTCAATGCACACGGTTTGACATCTGCTATAGCGT GAGCCAAGCAGCTCGCTTCATGAGCATGCCTTCTCAGGACAACATGATCG CGATAAAGAGGATTTTACGGTACCCACGGTTGCAACCAAATCTGCCCATC AAATACCGCAAAAACAATTTTGAGCAAATGGGCTACTCAGACGCCTCTTA TGGAGGAACAGAGGAGACACGAACAAAGTCGACTACCGGTTCGAAGTTCT TCTTCGCAAGTGAACTGGTTTACTTATTTTCAAGCCTTCAACGCATCACA GCAACCTCAAGCACTGAGGCAGAGCTAGTGGCATTAGCTACATGTGCAAA GCAGGGTATTTACCTGTCGAACTTGCTGATGGAGCTTGGATGGACGCAGC TCTCCAAGGTTAAAGTGCTCTACGACAGTAAGGGTGCTCTCCACCTAGCC AGCAACGCAAACTTCAGCTCGCGTAGCAAACACATCGTCATCCGCTTTGC AGTTCTCCGGCAATGGAATAAGAACAAGAGGCTTGTTATCAACCACGTCT CCTCACAGCACCAACTGAGCGATGTCCTCACCAAGCAGCTGGATCCGAGG GTACTT
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Coding sequence (CDS) from alignment at H-paniculata_contig26953:2267..3022-

>mRNA_H-paniculata_contig26953.7375.1 ID=mRNA_H-paniculata_contig26953.7375.1|Name=mRNA_H-paniculata_contig26953.7375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig26953:2267..3022- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACAAGTACGTATATTCTATTCTGAAACGATTTGGAATAGAAGAGGCTAC
TCCAGCCAAAAGCCCAGCATTAGGAAAGGTTATGCAGCAAATCGGTAACG
ACACCCAGCTGGACAAGCAAGGAACCAAGCAGTATCAAGCTATCGTGGGG
AGCATCACCTTCCTCACTCAATGCACACGGTTTGACATCTGCTATAGCGT
GAGCCAAGCAGCTCGCTTCATGAGCATGCCTTCTCAGGACAACATGATCG
CGATAAAGAGGATTTTACGGTACCCACGGTTGCAACCAAATCTGCCCATC
AAATACCGCAAAAACAATTTTGAGCAAATGGGCTACTCAGACGCCTCTTA
TGGAGGAACAGAGGAGACACGAACAAAGTCGACTACCGGTTCGAAGTTCT
TCTTCGCAAGTGAACTGGTTTACTTATTTTCAAGCCTTCAACGCATCACA
GCAACCTCAAGCACTGAGGCAGAGCTAGTGGCATTAGCTACATGTGCAAA
GCAGGGTATTTACCTGTCGAACTTGCTGATGGAGCTTGGATGGACGCAGC
TCTCCAAGGTTAAAGTGCTCTACGACAGTAAGGGTGCTCTCCACCTAGCC
AGCAACGCAAACTTCAGCTCGCGTAGCAAACACATCGTCATCCGCTTTGC
AGTTCTCCGGCAATGGAATAAGAACAAGAGGCTTGTTATCAACCACGTCT
CCTCACAGCACCAACTGAGCGATGTCCTCACCAAGCAGCTGGATCCGAGG
GTACTTCACAAGTACGTATATTCTATTCTGAAACGATTTGGAATAGAAGA
GGCTACTCCAGCCAAAAGCCCAGCATTAGGAAAGGTTATGCAGCAAATCG
GTAACGACACCCAGCTGGACAAGCAAGGAACCAAGCAGTATCAAGCTATC
GTGGGGAGCATCACCTTCCTCACTCAATGCACACGGTTTGACATCTGCTA
TAGCGTGAGCCAAGCAGCTCGCTTCATGAGCATGCCTTCTCAGGACAACA
TGATCGCGATAAAGAGGATTTTACGGTACCCACGGTTGCAACCAAATCTG
CCCATCAAATACCGCAAAAACAATTTTGAGCAAATGGGCTACTCAGACGC
CTCTTATGGAGGAACAGAGGAGACACGAACAAAGTCGACTACCGGTTCGA
AGTTCTTCTTCGCAAGTGAACTGGTTTACTTATTTTCAAGCCTTCAACGC
ATCACAGCAACCTCAAGCACTGAGGCAGAGCTAGTGGCATTAGCTACATG
TGCAAAGCAGGGTATTTACCTGTCGAACTTGCTGATGGAGCTTGGATGGA
CGCAGCTCTCCAAGGTTAAAGTGCTCTACGACAGTAAGGGTGCTCTCCAC
CTAGCCAGCAACGCAAACTTCAGCTCGCGTAGCAAACACATCGTCATCCG
CTTTGCAGTTCTCCGGCAATGGAATAAGAACAAGAGGCTTGTTATCAACC
ACGTCTCCTCACAGCACCAACTGAGCGATGTCCTCACCAAGCAGCTGGAT
CCGAGGGTACTT
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