prot_H-paniculata_contig2693.7368.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2693.7368.1
Unique Nameprot_H-paniculata_contig2693.7368.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: D8LFS3_ECTSI (Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS3_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 5.350e-28
Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   63 IPETHATGAEAREMDDVVFNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKLV 143
            IP+TH TG +  E + V FNR+P+HPPKG+GTK  P EVPSE  +R VG+E PE+HA+YWF L  G L YV EID YFKLV
Sbjct:   50 IPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLV 130          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A835ZBD2_9STRA (Cytochrome c oxidase subunit VB n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.540e-25
Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 0
Query:   46 QKATFFGRLWNSNMKAEIPETH--ATGAEAREMDDVVFNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKL 142
            ++ ++F +L++     +I E    ATG    E+    FN + + PP G+GT+EKPIEVPS    R VGYEDPETHAIYWFNLK G + +VT IDMYFKL
Sbjct:   27 KEESWFSKLFSFKSDRDIVEEDVAATGQRGEEVRGTFFNDQALMPPAGSGTREKPIEVPSRLDMRTVGYEDPETHAIYWFNLKAGKVHHVTPIDMYFKL 125          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A6U3QRH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QRH7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.710e-19
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0
Query:   67 HATGAEAREMDD-----VVFNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKLV 143
            H  G   +E++D     V FNR+P+ PP GAGTKE PI+VPS + +R VG+EDP  H + WF +  G L YV+ ID YF LV
Sbjct:   45 HQGGRRLQEIEDEKLGLVTFNRDPIMPPVGAGTKENPIQVPSGYDERVVGFEDPTVHQLQWFTMTAGKLHYVSSIDKYFTLV 126          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A7S1XX62_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX62_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.350e-19
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0
Query:   72 EAREMDDVVFNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKL--VDSP 146
            +A +  D++FNR+P+ PP GAGTKE PI VPSEF +R VG+EDP+TH I WF L+     Y+  +D YFKL  +++P
Sbjct:   53 DAEKSGDLLFNRDPIVPPVGAGTKENPILVPSEFKERVVGFEDPDTHQIAWFCLQADATYYIESVDKYFKLHTIENP 129          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A6U1NDJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDJ1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.520e-14
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   78 DVVFNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKLVDS 145
            +V + R+PV P  G GT   PI VPS   +RAVG+EDP +H + WF L+ G++ +V EIDMYFKL+ S
Sbjct:   58 EVAYVRDPVIPEPGQGTLANPILVPSAMKERAVGFEDPLSHQMQWFVLQEGDIHWVEEIDMYFKLIKS 125          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A7S1VA55_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VA55_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.960e-11
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   72 EAREMDDVVFNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAY-VTEIDMYFKLVDSPEFE 149
            E  E ++  +N   + PP+G GT + PI +PS F  R VGY+DP THA++WF++   N AY + ++ ++FK++  P+ E
Sbjct:  107 ELEEKNNEGYNDLGLVPPEGTGTFKSPILIPSRFHSRVVGYQDPTTHAMFWFSIHNDNNAYYIKDLGLFFKMLHIPDPE 185          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A7S2UEP8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEP8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.430e-11
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   59 MKAEIPETHATGAEAREMDDVV------FNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKR-GNLAYVTEIDMYFKLVDSPE 147
            MK ++ E    G E  E+D++       +N   + PP+GAG+   PI +PS    R VGY DPETHA+YWFN+    N  Y+ ++ ++FK++  PE
Sbjct:   70 MKKDLEELGLDGIE--ELDELEEANMEGYNDLGLVPPEGAGSFASPILIPSRLDCRQVGYCDPETHAMYWFNIYNDNNTYYIKDLGLFFKMLPIPE 163          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A7S2PUP9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PUP9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.460e-10
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   81 FNREPVHPPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKR-GNLAYVTEIDMYFKLVDSPEFE 149
            +N   + PP+GAGT   PI +PS    R VGY DP THA++WF ++   N  Y+ ++ ++FK++  P+ E
Sbjct:   96 YNNLGLVPPEGAGTYASPILIPSRMDSRVVGYNDPTTHALFWFTIQNDNNTYYIKDLGLFFKMLHIPDEE 165          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A7S0GFG8_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFG8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.570e-10
Identity = 26/63 (41.27%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   88 PPKGAGTKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKR-GNLAYVTEIDMYFKLVDSPEFE 149
            PP+ AGT + PI +PS   +R VGY DP +HA++WFN++  GNL ++ ++ ++FK++   + E
Sbjct:  102 PPEDAGTFQNPILIPSRLEERQVGYTDPVSHAVFWFNIQNDGNLYFIKDLGLFFKVLPVADIE 164          
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Match: A0A024FVF4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVF4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 5.700e-10
Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = 0
Query:   67 HATGAEAREMDD-----VVFNREPVHPPKGAG-TKEKPIEVPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKLVDSPEFEE 150
            HA G +  E++D     + FNR+P+   +  G +KE PI VPS    R +G    ++  ++WFNL++G + YV +I+ YFKL    E  E
Sbjct:   33 HAVGRQREELEDEKAGIITFNRDPIETDETQGNSKEDPILVPSFNDVRPIGVSHNDSSYVFWFNLQKGKIFYVPQIEKYFKLYHPQELAE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2693.7368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LFS3_ECTSI5.350e-2861.73Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus... [more]
A0A835ZBD2_9STRA3.540e-2551.52Cytochrome c oxidase subunit VB n=1 Tax=Tribonema ... [more]
A0A6U3QRH7_9STRA2.710e-1950.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XX62_9STRA3.350e-1951.95Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U1NDJ1_9STRA1.520e-1451.47Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S1VA55_9STRA3.960e-1139.24Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2UEP8_9STRA7.430e-1138.54Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2PUP9_9STRA1.460e-1040.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0GFG8_9STRA3.570e-1041.27Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A024FVF4_9STRA5.700e-1036.67Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3D2.60.11.10coord: 60..147
e-value: 2.0E-11
score: 45.7
IPR002124Cytochrome c oxidase, subunit VbPANTHERPTHR10122CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIALcoord: 16..143
NoneNo IPR availablePRODOMPD007270coord: 67..143
e-value: 8.0E-5
score: 106.0
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 65..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2693contigH-paniculata_contig2693:16469..16924 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2693.7368.1mRNA_H-paniculata_contig2693.7368.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2693 16357..18242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2693.7368.1 ID=prot_H-paniculata_contig2693.7368.1|Name=mRNA_H-paniculata_contig2693.7368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MLSAVVRRAGAARATSAAASAKLVHLRPNTQTSSALPKALITCSQQKATF
FGRLWNSNMKAEIPETHATGAEAREMDDVVFNREPVHPPKGAGTKEKPIE
VPSEFSQRAVGYEDPETHAIYWFNLKRGNLAYVTEIDMYFKLVDSPEFEE
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036972Cyt_c_oxidase_su5b_sf
IPR002124Cyt_c_oxidase_su5b