mRNA_H-paniculata_contig26804.7332.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 253 bits (647), Expect = 2.280e-73 Identity = 132/344 (38.37%), Postives = 214/344 (62.21%), Query Frame = 3
Query: 360 GFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSS-EVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTFG 1373
G+ + SDPCVY S + ++L+++VDDIL+TG +L+ +L ++F TD+GE ILG++V R+ + GTL +SQ YV ++L+RF M ANP PG + +T +D Q+L P K YQ+M GS+++L QCTRFD+ ++ +Q ++ S P Q ++ A K + RYL+G+P +PI Y R + +L ++D+S+ RSTTG +FF A GL+ + ++ +TA ST EAE+ AL+ A++ +Y+ EL + S + SD+ G L +A N+ +S R+KH+A+R+ +++ + R Q+ + H PS QLADI TK+ + FA + ++I F
Sbjct: 358 GWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 700
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE) HSP 1 Score: 246 bits (629), Expect = 9.560e-73 Identity = 130/344 (37.79%), Postives = 212/344 (61.63%), Query Frame = 3
Query: 360 GFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSS-EVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTFG 1373
G+ + SDPCVY S + ++L+++VDDIL+TG +L+ +L ++F TD+GE ILG++V R+ + GTL +SQ YV + L+RF M ANP G + +T +D Q+L P K YQ+M GS+++L QCT+FD+ ++ +Q ++ S P Q ++ A K + RYL+G+P +PI Y R + +L ++D+S+ RSTTG +FF A GL+ + ++ +TA ST EAE+ AL+ A++ +Y+ EL + S + SD+ G L +A N+ +S R+KH+A+R+ +++ + R Q+ + H PS QLADI TK+ + FA + ++I F
Sbjct: 150 GWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 492
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE) HSP 1 Score: 242 bits (617), Expect = 2.190e-72 Identity = 129/344 (37.50%), Postives = 211/344 (61.34%), Query Frame = 3
Query: 360 GFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSS-EVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTFG 1373
G+ + SDPCVY + + ++L+++VDDIL+TG +L+ +L ++F TD+GE ILG+ V R+ + GTL +SQ YV ++L+RF M ANP PG + +T +D Q+L P K YQ+M GS+++L QCTRFD+ ++ +Q ++ S P Q ++ A K + RYL+G+P +PI Y R + +L ++D+S+ RSTTG +FF A GL+ + ++ +TA ST EAE+ AL+ A++ +Y+ EL + S + SD+ G L +A N+ +S R+ ++A+R +++ + R Q+ + H PS QLADI TK+ + FA + ++I F
Sbjct: 31 GWKRTQSDPCVYVYTTGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRT-NVALRCFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 372
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.130e-71 Identity = 131/344 (38.08%), Postives = 213/344 (61.92%), Query Frame = 3
Query: 360 GFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSS-EVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTFG 1373
G+ + SDPCVY S + ++L+++VDDIL+TG +L+ +L ++F TD+GE ILG++V R+ + GTL +SQ YV ++L+RF M ANP PG + +T +D Q+L P K YQ+M GS+++L QCTRFD+ ++ +Q ++ S P Q ++ A K + RYL+G+P +PI Y R + +L ++D+S+ RSTTG +FF A GL+ + ++ +TA ST EAE+ AL+ A++ +Y+ EL + S + SD+ G L +A N+ +S R+KH+ +R+ +++ + R Q+ + H PS QLADI TK+ + FA + ++I F
Sbjct: 514 GWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 856
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.180e-71 Identity = 131/340 (38.53%), Postives = 206/340 (60.59%), Query Frame = 3
Query: 360 GFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSSEVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKI 1361
G+ + SDPCVY S D +L+++VDDIL+TG ++ +LM+ F TD+GE ++G+EV R+ + GTL +SQ Y +L R+ M ANP PG + +T +D QLL P + +QA+ GSL++L QCTR+D+ ++V Q R + P Q H+ A K + RYL+G PD+PI Y + + +L ++D+S+ RSTTG +FF GL+ + ++ + A +T EAEL AL+ A++ +Y+ E+G + S + SD+ G L +A+N+ +SSR+KHIA+RF L++ + H++ + H PS LADI TKH + FA + + I
Sbjct: 391 GWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 729
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 235 bits (600), Expect = 5.760e-69 Identity = 136/346 (39.31%), Postives = 197/346 (56.94%), Query Frame = 3
Query: 354 EHGFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGL--QLTSSEVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTF 1370
E GF SDPCVY N I L+L+VDD+L+ G + V KL +F TDLGEASL+LGME+ R+++ TL +SQ Y S+L+RF MS + PT PG ++ + ED LLD T++YQ +VGSL+++ Q R+D+ ++ Q AR M+ P++ H+VA K RYL G D ITY + KL +SD+++ +ST+ + AN + F S L +TA ST EAEL+A A K+ ++ + ELG + V DN LH N ++SSR+KHIA+RF +++ + ++ I + P+ D LADI TKH + F L I F
Sbjct: 91 EIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE) HSP 1 Score: 241 bits (616), Expect = 6.550e-67 Identity = 132/352 (37.50%), Postives = 215/352 (61.08%), Query Frame = 3
Query: 360 GFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLG-------YSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQG-IYLLGICRELGLQLTSS-EVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTFG 1373
G+ + SDPCVY S ++ ++ S++VDDIL+TG +L+ +L ++F TD+GE ILG++V R+ + GTL +SQ YV ++L+RF M ANP PG + +T +D Q+L P K YQ+M GS+++L QCTRFD+ ++ +Q ++ S P Q ++ A K + RYL+G+P +PI Y R +++L ++D+S+ RSTTG +FF A GL+ + ++ +TA ST EAE+ AL+ A++ +Y+ EL + S + SD+ G L +A N+ +S R+KH+A+R+ +++ + R Q+ + H PS QLADI TK+ + FA + ++I F
Sbjct: 737 GWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 1087
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 234 bits (596), Expect = 7.780e-64 Identity = 135/346 (39.02%), Postives = 197/346 (56.94%), Query Frame = 3
Query: 354 EHGFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGL--QLTSSEVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTF 1370
E GF SDPCVY N I L+L+VDD+L+ G + V KL +F TDLGEASL+LGME+ R+++ TL +SQ Y S+L+RF +S + PT PG ++ + ED LLD T++YQ +VGSL+++ Q R+D+ ++ Q AR M+ P++ H+VA K RYL G D ITY + KL +SD+++ +ST+ + AN + F S L +TA ST EAEL+A A + ++ + ELG + V DN LH N ++SSR+KHIA+RF +++ + ++ I +VP+ D LADI TKH + F L I F
Sbjct: 1320 EIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE) HSP 1 Score: 222 bits (566), Expect = 3.900e-63 Identity = 130/370 (35.14%), Postives = 206/370 (55.68%), Query Frame = 3
Query: 246 GRGLDRICTR------CSSCFSKRQAEGEPQ*VESYNRQRAEEHGFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSS-EVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTK 1319
G L+ +C R +K A GEP V R + + SDPCVY S + ++L+++VDDIL+TG +L+ +L ++F TD+GE ILG++V R+ + GTL +SQ YV ++L+RF M ANP Q+L P K YQ+M GS++ L QCTRFD+ ++ +Q ++ S P Q ++ A K RYL+G+P +PI Y R + +L ++D+S+ RSTTG +FF A GL+ + ++ +TA ST EAE+ AL+ A++ +Y+ EL + S + SD+ G L +A N+ +S R+K +A+R+ +++ + Q+ + H PS QLAD T+
Sbjct: 90 GAFLNALCDRDVYVRPAPGTSAKNSATGEPM-VYKLERSLYGLSQWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPD-----------------QILGPTDKKIYQSMTGSILNLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHDVRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNATHSQRTKLVALRYFFIRELVLLGQITLHHRPSEHQLADXMTE 441
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 230 bits (586), Expect = 5.200e-63 Identity = 135/346 (39.02%), Postives = 195/346 (56.36%), Query Frame = 3
Query: 354 EHGFYTSISDPCVYSKGSNDTYIMLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNMSSANPTKPPGVKTDSTTTTSEDRQLLDPAATKEYQAMVGSLIFLTQCTRFDVCFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCELKLLGYSDASYYT-----RSTTGTMFFFANGLVHFSSRLHKITATSTTEAELIALATCAKQGIYLLGICRELGL--QLTSSEVRSDNRGPLHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVPSTDQLADIPTKHCERVVFAQLRRKILTF 1370
E GF SDPCVY N I L+L+VDD+L+ G + V KL +F TDLGEASL+L ME+ R+++ TL +SQ Y S+L+RF MS + PT PG ++ + ED LLD T++YQ +VGSL+++ Q R+D+ ++ Q AR M+ P++ H+VA K RYL G D ITY + KL +SD+++ +ST+ + AN + F S L +TA ST EAEL+A A K+ ++ + ELG + V DN LH N ++SSR+KHIA+RF +++ + ++ I +V + D LADI TKH F L I F
Sbjct: 651 EIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26804.7332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26804.7332.1 >prot_H-paniculata_contig26804.7332.1 ID=prot_H-paniculata_contig26804.7332.1|Name=mRNA_H-paniculata_contig26804.7332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp MLSLFVDDILVTGPTDRLLMDVHNKLMNKFTTTDLGEASLILGMEVLRNKback to top mRNA from alignment at H-paniculata_contig26804:312..1791+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26804.7332.1 ID=mRNA_H-paniculata_contig26804.7332.1|Name=mRNA_H-paniculata_contig26804.7332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1480bp|location=Sequence derived from alignment at H-paniculata_contig26804:312..1791+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26804:312..1791+ >mRNA_H-paniculata_contig26804.7332.1 ID=mRNA_H-paniculata_contig26804.7332.1|Name=mRNA_H-paniculata_contig26804.7332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at H-paniculata_contig26804:312..1791+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |