prot_H-paniculata_contig26783.7324.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26783.7324.1
Unique Nameprot_H-paniculata_contig26783.7324.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length197
Homology
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5L4A4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 9.080e-38
Identity = 72/215 (33.49%), Postives = 118/215 (54.88%), Query Frame = 0
Query:    1 MTTQYKGLVQTGTPNR-ENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIE-----------------DMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            M  +  G  +TGT  + +  P+  + I S W++ WKT+  G++   K R++ARG  Q+ G+D+  +F+   S A+IK   AVA  +G    HW++ Q+ I  KL+E+ C+                   +YGL Q+ R W    A  L E  +EQC  DPC+FR+++D  V +LI+I+VDD++++  +   ++L+  +N+ F    LGE  WY G
Sbjct:    1 MKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKSRMIARGFSQIPGIDFHHSFSACPSAASIKTVIAVATEMGKKLAHWDVKQAYIHAKLKEETCLRFPEGYGNMSGKVVKVERALYGLKQSGREWGFEAAGALIENGYEQCRVDPCVFRKVVDGEVVSLIVIYVDDILVVADEGEREELFASLNKKFPVESLGEYTWYDG 215          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5JJW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW4_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.680e-37
Identity = 76/198 (38.38%), Postives = 114/198 (57.58%), Query Frame = 0
Query:    1 MTTQYKGLVQTGTPNR-ENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIEDMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            M  +++G + TGT +  +  P+  RP+ S W + WKT+ +G +   K RLVARG  Q+  +D   + +P  S A+IK   AVAN  G++  HW++ Q+              +YGL Q+ R W    A+TL E  FEQC  DPC FR I+D+ V  +I+I+VDD+++ GS E C+KL   +N+ F   +LGE  W+ G
Sbjct:  204 MREEFEGHLGTGTFSFVDGAPEGRRPVSSQWCFSWKTNKEGKMDKFKARLVARGFLQIPNVDSFHSASPCPSSASIKLMFAVANEKGMNLNHWDVKQAE-----------RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCCFREIVDEVVVMIIVIYVDDILVAGSDEDCEKLLASLNKQFPTKNLGECQWFDG 390          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5KEU9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.940e-34
Identity = 69/189 (36.51%), Postives = 105/189 (55.56%), Query Frame = 0
Query:   26 IYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICI-----------------EDMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            I S  I+ WK D  G  T AK RLVARG+ Q + +D+ D +AP  + ++++  AA+A  L L   H++I Q+ +    +ED  +                 + +YGL QASR W+ LL   L    FEQC+ D C+FR +    V  L+++HVDD++ +G+KE CD+  +D+ ++     LGEL WY G
Sbjct:  147 IKSKLIFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPNVASSSVRMLAALACELDLELCHFDIDQAFVRAPFKEDTFMRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRSVEGGEVVLLLVVHVDDIVAVGTKERCDQFGKDLGEYVPVKSLGELKWYSG 335          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 6.230e-34
Identity = 72/212 (33.96%), Postives = 118/212 (55.66%), Query Frame = 0
Query:    4 QYKGLVQTGTPNR-ENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIE-----------------DMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            +  G  +TGT ++ E  P+  + + + W++ +KTD  G++T  K RLVARG  QV G DY  + +   ++++IK   A A   GL T H++I Q+    K++E++ +                   +YGL Q+ R W    AN L +  +EQC  DPC+FR+I+D +V ++I+I+VDD+M +GS+E  ++L   + +      LGE  WY G
Sbjct:  758 EMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDG 969          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 6.450e-34
Identity = 72/212 (33.96%), Postives = 118/212 (55.66%), Query Frame = 0
Query:    4 QYKGLVQTGTPNR-ENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIE-----------------DMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            +  G  +TGT ++ E  P+  + + + W++ +KTD  G++T  K RLVARG  QV G DY  + +   ++++IK   A A   GL T H++I Q+    K++E++ +                   +YGL Q+ R W    AN L +  +EQC  DPC+FR+I+D +V ++I+I+VDD+M +GS+E  ++L   + +      LGE  WY G
Sbjct: 1311 EMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDG 1522          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.510e-33
Identity = 71/189 (37.57%), Postives = 106/189 (56.08%), Query Frame = 0
Query:   26 IYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICI-----------------EDMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            I S  ++ WK D  G  T AK RLVARG+ Q + +D+ D +APT + ++++  AA+A  L L   H++I Q+ +   L E+I +                 + +YGL QASR W+ LL   L    FEQC+ D CLFR +    V  L+++HVDD+  +G+KE CD+  +D+ ++     LGEL WY G
Sbjct:  151 IKSKLLFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVGTKERCDQFGKDLGEYVPVKSLGELKWYSG 339          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 4.130e-33
Identity = 76/211 (36.02%), Postives = 110/211 (52.13%), Query Frame = 0
Query:    4 QYKGLVQTGTPNRENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIE-----------------DMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            ++ GL   GT   +        I + W+Y WK D  G    AK RLVARG  Q +G+D+ +TF+P  SI +I+  AA+A  L   + H+   Q+ ++ +L+E + I                   +YGL QASRTWH  L   +K   FE C  D C+ R I    V  +++IHVDD+  IG K  CD+   D+N++   ++LGEL WY G
Sbjct: 1391 EFFGLNAVGTFEEQR---GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDSCHFYAEQAFVQSELDEVVFIRLPPACGARSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAG 1598          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 9.820e-33
Identity = 72/189 (38.10%), Postives = 103/189 (54.50%), Query Frame = 0
Query:   26 IYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIE-----------------DMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG 197
            I + W+Y WK D  G    AK RLVARG  Q +G+D+ +TF+P  SI +I+  AA+A  L     H++  Q+ ++ +L+E + I                   +YGL QASRTWH  L   +K   FE C  D C+ R I    V  +++IHVDD+  IG K  CD+   D+N++   ++LGEL WY G
Sbjct:  824 ISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRGLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPVSNLGELRWYAG 1012          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5K7Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y0_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 6.630e-32
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 0
Query:   26 IYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICI-----------------EDMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNW 194
            I S  I+ WK D  G  T AK RLVARG+ Q + +D+ D +APT + ++++  AA+A  L L   H++I Q+ +   L+EDI +                 + +YGL QASR W+ LL   L    FEQC+ D C+F  +    V  L+++HVDD+  +G+KE CD+  +D+ ++     LGEL W
Sbjct: 1461 IKSKLIFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLKEDIFMRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFHLVEGGEVVLLLVVHVDDIFAVGTKERCDQFGKDLGEYVPVKSLGELKW 1646          
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 7.750e-31
Identity = 74/209 (35.41%), Postives = 107/209 (51.20%), Query Frame = 0
Query:    4 QYKGLVQTGTPNRENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLVARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIEGKLEEDICIE-----------------DMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILDKRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWY 195
            ++ GL   GT            I + W+Y WK D  G    AK RLVARG  Q +G+D+ +TF+P  SI +I+  AA+A  L      ++  Q+ ++ +L+E + I                   +YGL QASRTWH  L   +K   FE C  D C+ R I    V  +++IHVDD+  IG K  CD+   D+N++   ++LGEL WY
Sbjct: 1273 EFFGLNAVGTFEERG----TNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCPFDAQQAFVQSELDEIVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWY 1477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26783.7324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4A4_9PHAE9.080e-3833.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJW4_9PHAE1.680e-3738.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KEU9_9PHAE2.940e-3436.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKS3_9PHAE6.230e-3433.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE6.450e-3433.96Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K307_9PHAE1.510e-3337.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE4.130e-3336.02Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JV09_9PHAE9.820e-3338.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Y0_9PHAE6.630e-3237.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBJ6_9PHAE7.750e-3135.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 20..109
e-value: 9.4E-13
score: 48.4
coord: 111..197
e-value: 7.0E-11
score: 42.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 23..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26783contigH-paniculata_contig26783:2099..2769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26783.7324.1mRNA_H-paniculata_contig26783.7324.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26783 2099..2775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26783.7324.1 ID=prot_H-paniculata_contig26783.7324.1|Name=mRNA_H-paniculata_contig26783.7324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MTTQYKGLVQTGTPNRENPPDNNRPIYSMWIYKWKTDLDGVVTGAKVRLV
ARGNKQVQGLDYDDTFAPTSSIATIKAGAAVANGLGLSTFHWNISQSSIE
GKLEEDICIEDMYGLNQASRTWHTLLANTLKEKRFEQCLNDPCLFRRILD
KRVETLIIIHVDDMMIIGSKEVCDKLYEDINQHFLPTHLGELNWYMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2