prot_H-paniculata_contig265.7234.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig265.7234.1
Unique Nameprot_H-paniculata_contig265.7234.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length691
Homology
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BLAST of mRNA_H-paniculata_contig265.7234.1 vs. uniprot
Match: A0A7S2MHM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHM4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.550e-10
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0 
Query:  463 PLFKTLRAGELVQARYTADDKWYSAVICQVIHSGFQIARYKVRYTEYENEETISWTRI 520
            PL+K LR G+ VQAR++ D  +Y AV+ QVIH GF IA+Y V YT Y N E +SW  I
Sbjct:   40 PLWKRLRVGDQVQARFSEDRTYYEAVVKQVIHGGFAIAKYTVLYTAYGNSEVVSWKDI 97
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BLAST of mRNA_H-paniculata_contig265.7234.1 vs. uniprot
Match: A0A836CA01_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA01_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.610e-10
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0 
Query:  463 PLFKTLRAGELVQARYTADDKWYSAVICQVIHSGFQIARYKVRYTEYENEETISWTRIK 521
            PL+  L+ G+ V+A+YT DD WY+A + QVIHSG+ I + KV YT+Y N+ETI W R++
Sbjct:  568 PLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYTQYGNQETILWKRVR 626
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig265.7234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2MHM4_9STRA1.550e-1055.17Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A836CA01_9STRA1.610e-1052.54Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..187
NoneNo IPR availableGENE3D2.30.30.140coord: 453..526
e-value: 6.7E-11
score: 43.6
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 468..521
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 466..528
e-value: 2.3E-6
score: 37.2
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 467..530
score: 11.329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig265contigH-paniculata_contig265:30321..33002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig265.7234.1mRNA_H-paniculata_contig265.7234.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig265 30299..33122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig265.7234.1 ID=prot_H-paniculata_contig265.7234.1|Name=mRNA_H-paniculata_contig265.7234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=691bp
MDVSGFTEDDQARIADEVHARARSKRVGLGFGVSATSNVDNPPPSEEPSS
SRSSAWFHEARNATHFEDAEDENTDTTKGVFPWDGGRRDKPEAARWGVHF
GGERSAPRATEEAATTGRPQERDFPMVRDRDIEYSKVGSDTHSRRRGEKR
EADSGRRRRRSRSTSRDRQIERRRDKWERERERERDRRRERGGGRDRDRD
RFSGGRRSRSRDRDSLNRSRDHRHDRARDVDPSNNPTDSALANAAPANSG
KRGSTLPSAKQAKASLKRRLKEAVAGDATLKMGFKASLGGGGGWERAEMA
EAADFFTNDEVAAKGEVASVAPEYEARMAEIRAIEDEDIMCLGDEVRKPS
AATVHGLGGPTSIDSVVQKHHDAIFSPTGSSPNHNEFLADPAQTLALQQT
GPDANRENTRVFSAGVVGAAARARLALTGKSGEMPKVTKQTRVSTRTRSE
ERSFVEKDEKEEPLFKTLRAGELVQARYTADDKWYSAVICQVIHSGFQIA
RYKVRYTEYENEETISWTRIKRSELEQAPPPLPTPKVAIALVSIPSPKPG
PSGTDVEPRERSSVEFAGLRPRSLGVEHSTLQSRLPGDKSELATPDEDIA
DVVINPSLLSSSNPGKKLSWKEKLQARKAAPGSGVDVAPTTSAKKEISLV
PDYAAVAQRREQQVDQSLDKSPWRSKVVFGMGGSKAGDRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor