prot_H-paniculata_contig2649.7229.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2649.7229.1
Unique Nameprot_H-paniculata_contig2649.7229.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length985
Homology
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 3.400e-132
Identity = 329/545 (60.37%), Postives = 374/545 (68.62%), Query Frame = 0
Query:  393 GEKTGAGDSG--------ASWKIDPKLENDLLKLFGQADQIDEAFKMLEDMIQRRDSPDSETWLVLLNAVTTAEALDKAVALIERSRVEGRGSEINELTYSALLGACGRAKKLARAFRVVEGMKETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISDDNTRRTRELQRSRQQEDWLLTPI------PAAANTAAIAAIETAAPHSSPRTYSATSGVVPVEERATVPGDTASAGAATVADAATFGLDE--PKVVVAAAASGDTVESPTFEADKQGGRIVPTAAATAASATGEITGRSSRPRISKFHDSIDLVALGASTIPPLSQSDPSFSPERPASMSSGSRVE---RGPLGEGSGSPHG-SKKKTENENPAVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACADVGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAARATPPRVEEAEEIFAVMQQRTNHFSTFARPTEVTYAHLMRASVEAGNYDRALELWWQQQAAGVRPGSRSTRAALTACSG 917
            G  TG G SG         +W+++ KLE+DLL+LFGQADQ+D AFK+LE M++RRDSPD ETWL+LLNAV TA ALDKAV L+ERSR EG GSEINELTYSALLGACGRAKKLARAFR+V+ M+ETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AIS++NT RTR LQR+R  E     P       PA  ++ A AA    AP        A S  +P    +T PG T S GA+T+      G+D+    + V A A G T           GG   P AAAT A A  E +                ++A  +S+      + P+         +S  R E   RGP  + + S    S   ++N NPA+DNLFRVFLVFQEMRSRGVRPDLRAYNALVN CAD+GE DRAL VVR MVD+ EGGGLQPDAVTYTSLIKAAARA PPRVEEAEEIFA MQQRTNHFSTFARPTEVTYAHLMRASV A +Y RALE+W QQ +AGV PG RSTRAAL AC G
Sbjct:  518 GATTGEGGSGETATARGRGAWRMNRKLESDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAISEENTLRTRALQRTRMLETRRSPPSSSAVRRPAEGSSVAAAASAPGAP--------AQSSPLP----STAPGTT-SGGASTLPR---DGVDDRGKSLDVRADAVGTTKVV-------AGGGKGPAAAATRAHAKEEPS----------------VIAAWSSSSSGRGTAGPATKAGGVGGYASSGRSEASLRGPTADPTESSRAPSSTSSDNANPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLSAGVAPGPRSTRAALAACGG 1023          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A836CEM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.760e-38
Identity = 85/155 (54.84%), Postives = 111/155 (71.61%), Query Frame = 0
Query:  761 NENPAVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACADVGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAARATPPRVEEAEEIFAVMQQRTNHFSTFARPTEVTYAHLMRASVEAGNYDRALELWWQQQAAGVRPGSRSTRAALTAC 915
            + +PA DNLFRVFLVF EM+S+GV+PD  AYNAL+N+CA VG+L+RA+ V+RQM +++    L PDA+T+TSLIK AA A     + AEEIFA MQQRTNHFSTF RP+E T+ H++ A++    + R  ELW Q  A G+ P SR+    L AC
Sbjct:  652 HSDPAADNLFRVFLVFGEMKSQGVQPDRPAYNALINSCAAVGDLERAMAVLRQMYEDEHC--LPPDAITFTSLIKTAAAAH--NADAAEEIFAAMQQRTNHFSTFHRPSERTFRHMITANMNIKRFSRVQELWAQMLAEGLAPSSRTCSLVLGAC 802          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A7S0XEC2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEC2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.590e-22
Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0
Query:  755 SKKKTENENPAVDNLFRVFLVFQEMR-SRGVRPDLRAYNALVNACADVGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAA-RATPPRVEEAEEIFAVMQQRTNHFSTFARPTEVTYAHLMR 878
            + ++T+ E    D+LFR++LVFQEM+ +  ++ D   YN L+NACA VG++DRALE +  M +     G++P+ +TYTSLIKA A  +    +E AE IF  MQQR+NHFS + +P E+TY  LM+
Sbjct:  161 NSRQTKVEQMKRDDLFRLYLVFQEMKYNPAIQLDTAVYNTLINACAGVGDIDRALETMTAMQEN----GIEPNVITYTSLIKACAFNSRNEMIELAENIFNEMQQRSNHFSNYIQPNEMTYEKLMQ 282          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A0G4F8K7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8K7_VITBC)

HSP 1 Score: 103 bits (257), Expect = 8.240e-19
Identity = 164/515 (31.84%), Postives = 224/515 (43.50%), Query Frame = 0
Query:  407 IDPKLENDLLKLFGQADQIDEAFKMLEDMIQRRDSPDSETWLVLLNAVTTAEALDKAVALIERSRVEGRGSEINELTYSALLGACGRAKKLARAFRVVEGMKETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISDDNTRRT-RELQRSRQQEDWLLTPIPAAANTAAIAAIETAAPHSSPRTYSATSGVVPVEERATVPGDTASAGAATVADAATFGLDEPKVVVAAAASGDTVESPTFEADKQGGRIVPT-------AAATAASATGEITGRSSRPRISKFHDSIDLVALGASTIPPLSQSDPSFSPERPASMSSGSRVERGPLGEGSGSPHGSKKKTENENPAVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACADVGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAARATPPRVEEAEEIFAVMQQRTNHFSTFARPTEVTYAHLMRASVEAGNYDRALELW-WQQQAAGVRPGSRSTRAAL 912
            I   L   L+++F QA  ++ AF M E MIQ+R +PD  T   L +A+                R     + I+ +TYSA+LGAC RA+ + +AF + + M   GV P E     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +SD+  RR  R+L R RQ  D   TPI   + T   + ++   P  SP  +   + +  V+ R                                   G  +  P    D++  R  P+       A A  ASA   +    SRPR+      +D +A                                                 E ++   +NLFR+FLVFQEM+S GV+PDL AYN L++AC   GE+++A+EV                                     A      MQQRTNHF++   P+E+T+  LM A+  A    R  EL+   Q+  G+RP  R+   A+
Sbjct:  365 IQSNLTRPLMQMFSQARLLNRAFDMFERMIQQRQAPDQATLQTLFDAIXXXXXXXXXXXXXXXMR---ESTHISRVTYSAVLGACRRARTIVKAFLLFKDMMAAGVTPGESEYLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTVSDEFRRRAARKLNRHRQIAD---TPITEPSQTPDTS-LDRLPPSPSPAQFPWNAAMSSVDLR----------------------------------QGKKLSPPRDVLDRRKKRAEPSPPERRVEAEALPASAPPSVALGLSRPRLRH----LDSMAYSL----------------------------------------------EEQHYYRENLFRIFLVFQEMQSSGVQPDLCAYNTLLDACGRAGEVEKAMEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------MQQRTNHFASCVLPSELTFKQLMLANRNAYRLRRVFELFDMMQRQHGIRPTLRTGAIAI 782          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A0M0JUW1_9EUKA (Methionine--tRNA ligase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUW1_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 6.140e-14
Identity = 56/150 (37.33%), Postives = 70/150 (46.67%), Query Frame = 0
Query:  765 AVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACADVGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAARATPPRVEEAEEIFAVMQQRTNHFSTFARPTEVTYAHLMRASVEAGNYDRALELWWQQQAAGVRPGSRSTRAALTA 914
            A D L  VF VF EMR+ GV PDL A+NAL+NACA VG++ RA                                     V      +  MQQRTNHFSTF  P+  TY HLM   +EA +    L+L+ + +A G+ PG     A L A
Sbjct: 1004 ASDTLQAVFTVFTEMRAAGVAPDLAAFNALINACASVGDVSRAEGAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV------YHEMQQRTNHFSTFTPPSAHTYRHLMAVHLEAAHAHTVLDLFDEMKARGIAPGHAHYAAVLGA 1147          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A7S2D4Z0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D4Z0_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 4.390e-10
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   31 CNKFLRALGDAGAIDDAISAYEAMVASGLRPTIVTFSTLISRAGACRRVRVAERFY 86
            CNK LR LGD G ++  +  +EAMVASG+RPT VT+ TLISRAGA R+ ++A R Y
Sbjct:    2 CNKLLRVLGDGGHLEAMVGVFEAMVASGVRPTQVTYGTLISRAGAHRQPKLASRMY 57          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A7S2E620_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E620_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.970e-9
Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 0
Query:  761 NENPAVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACADVGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAARATPPRVEEAEEIF 852
            N N A   L +VFLVFQEMR  G +PD   YN L+ ACA  G+  RA +V+ +++D D+   L+P  V++  +++AA+R+        E+++
Sbjct:  749 NINDAKTLLVKVFLVFQEMRDAGAKPDTACYNVLLGACARAGDFTRARDVLNKLMDSDD---LEPTHVSWREMLRAASRSKTASSHLVEQVW 837          
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Match: A0A1E7FP56_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FP56_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.460e-7
Identity = 31/99 (31.31%), Postives = 62/99 (62.63%), Query Frame = 0
Query:  755 SKKKTENENPAVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACADVGELDRALEVVRQMVD-------------EDEGGGLQPDAVTYTSLIKAAARA 840
            S +  E  N A + L++V +VF+EM++ G   D+R+YN L+ +CA  G+++RA+E++++++D             + + G LQP+  T+ ++++AA +A
Sbjct:  772 STRGQEISNNASNELYQVSMVFREMKASGCGVDIRSYNMLLRSCAKSGDINRAMEILKEIMDGKQQQQQHYRPQQQQDHGTLQPNDRTWRAVLRAAGKA 870          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2649.7229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LSJ6_ECTSI3.400e-13260.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEM1_9STRA1.760e-3854.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0XEC2_9STRA1.590e-2246.03Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A0G4F8K7_VITBC8.240e-1931.84Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0M0JUW1_9EUKA6.140e-1437.33Methionine--tRNA ligase n=1 Tax=Chrysochromulina t... [more]
A0A7S2D4Z0_9EUKA4.390e-1058.93Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2E620_9STRA3.970e-938.04Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7FP56_9STRA5.460e-731.31Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 414..438
e-value: 0.11
score: 12.8
coord: 64..94
e-value: 0.15
score: 12.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 775..814
e-value: 5.3E-7
score: 29.6
coord: 474..526
e-value: 1.4E-9
score: 37.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 274..308
e-value: 3.4E-5
score: 21.7
coord: 239..272
e-value: 1.4E-7
score: 29.2
coord: 170..202
e-value: 3.0E-7
score: 28.2
coord: 483..516
e-value: 6.9E-6
score: 23.9
coord: 912..939
e-value: 5.0E-4
score: 18.1
coord: 64..98
e-value: 2.1E-5
score: 22.4
coord: 790..818
e-value: 7.4E-5
score: 20.7
coord: 134..167
e-value: 1.6E-7
score: 29.1
coord: 204..238
e-value: 1.1E-7
score: 29.6
coord: 102..132
e-value: 4.1E-8
score: 30.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 96..145
e-value: 3.1E-13
score: 49.7
coord: 174..213
e-value: 5.9E-10
score: 39.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 27..61
score: 9.306
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 408..442
score: 8.67
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 443..477
score: 6.445
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 97..131
score: 13.044
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 202..236
score: 11.762
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 787..817
score: 10.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 515..549
score: 9.756
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 11.312
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 904..938
score: 8.879
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..341
score: 6.917
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 480..514
score: 11.575
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 826..858
score: 8.605
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 62..96
score: 10.216
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 869..903
score: 9.69
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 272..306
score: 10.413
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 132..166
score: 12.397
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 167..201
score: 11.674
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 22..161
e-value: 1.8E-36
score: 128.3
coord: 755..863
e-value: 1.3E-21
score: 79.5
coord: 864..979
e-value: 4.5E-17
score: 64.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 174..403
e-value: 1.0E-48
score: 168.3
coord: 404..584
e-value: 1.8E-31
score: 111.7
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 833..953
e-value: 5.5E-8
score: 32.4
coord: 215..330
e-value: 1.1E-13
score: 51.1
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 32..177
coord: 413..563
coord: 128..335
coord: 775..965

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2649contigH-paniculata_contig2649:1673..10552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2649.7229.1mRNA_H-paniculata_contig2649.7229.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2649 535..11265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2649.7229.1 ID=prot_H-paniculata_contig2649.7229.1|Name=mRNA_H-paniculata_contig2649.7229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=985bp
MARRRLRLTRAKNSVNSGAVAAQGQGGVPACNKFLRALGDAGAIDDAISA
YEAMVASGLRPTIVTFSTLISRAGACRRVRVAERFYREMLETGITPDVQA
MNSLINAFSKAGSPDEALKVFDQMSDFGLTPSLITFNSLIDACARKGDIE
RARSVFDRLGRAGLTPNDRTFSSLIHSHAVRGQVDEAFSLLKDMRARGLA
PNRVTYSALINTCGRAGQLARAFQTLGEMCNAGIEPNVITWTTLIDACGK
GKELEWSFRLFNEMRALGTVPNGVTLSALMDACLKADELDLAFAVLEHML
DVGIEPTEVTYTSLLTQCARLGKADKAGIVLAGLDSRRRVAATNGPSSLS
PYSSASSVVNSAAQTATVVSQTVAAQEAGRIGNTAAVVDEGDGEKTGAGD
SGASWKIDPKLENDLLKLFGQADQIDEAFKMLEDMIQRRDSPDSETWLVL
LNAVTTAEALDKAVALIERSRVEGRGSEINELTYSALLGACGRAKKLARA
FRVVEGMKETGVKPTEGTYVALLEACRHTRDSKAAVEVFEAMETDGVRPG
VQSYTSLLQAISDDNTRRTRELQRSRQQEDWLLTPIPAAANTAAIAAIET
AAPHSSPRTYSATSGVVPVEERATVPGDTASAGAATVADAATFGLDEPKV
VVAAAASGDTVESPTFEADKQGGRIVPTAAATAASATGEITGRSSRPRIS
KFHDSIDLVALGASTIPPLSQSDPSFSPERPASMSSGSRVERGPLGEGSG
SPHGSKKKTENENPAVDNLFRVFLVFQEMRSRGVRPDLRAYNALVNACAD
VGELDRALEVVRQMVDEDEGGGLQPDAVTYTSLIKAAARATPPRVEEAEE
IFAVMQQRTNHFSTFARPTEVTYAHLMRASVEAGNYDRALELWWQQQAAG
VRPGSRSTRAALTACSGAGNVETALKVYRVMREVGIRPDNRSTLELVKLC
RASNMPDMASRIMRERSNFISHGDNRRYHYYKHN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long