prot_H-paniculata_contig26383.7204.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26383.7204.1
Unique Nameprot_H-paniculata_contig26383.7204.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A0R6M0J1_UNDPI (50S ribosomal protein L16, chloroplastic n=49 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M0J1_UNDPI)

HSP 1 Score: 238 bits (607), Expect = 3.320e-79
Identity = 118/126 (93.65%), Postives = 122/126 (96.83%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPKKTKFRKQHRGRLKGKASRGN I+FGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKP+TARAAESRMGSGKGSV+YWVAVVKPGTILFELSGVP  LAK+AM IASYKLP
Sbjct:    1 MLSPKKTKFRKQHRGRLKGKASRGNKISFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPVTARAAESRMGSGKGSVDYWVAVVKPGTILFELSGVPLKLAKEAMIIASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: D1J745_ECTSI (50S ribosomal protein L16, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=D1J745_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 9.520e-79
Identity = 117/126 (92.86%), Postives = 122/126 (96.83%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPKKTKFRKQHRGRLKGKASRGN+INFGDYA+QALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPG ILFEL GVP  LAK+A++IASYKLP
Sbjct:    1 MLSPKKTKFRKQHRGRLKGKASRGNSINFGDYALQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGHILFELGGVPAKLAKEALEIASYKLP 126
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BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A1I9LVW6_9PHAE (50S ribosomal protein L16, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVW6_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 2.050e-78
Identity = 116/126 (92.06%), Postives = 122/126 (96.83%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPKKTKF+KQHRGRLKGKASRGN INFG+YA+QALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPG ILFELSGVP  LAK+A++IASYKLP
Sbjct:    1 MLSPKKTKFKKQHRGRLKGKASRGNNINFGEYALQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGHILFELSGVPLKLAKEALQIASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A2I4Q2I6_9PHAE (50S ribosomal protein L16, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2I6_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 1.040e-76
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPKKTKF+KQ RGRLKGKAS GNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKG+++YWVA VKPGTILFELSGV  TLAK+AMKIASYKLP
Sbjct:    1 MLSPKKTKFKKQQRGRLKGKASSGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGALDYWVAKVKPGTILFELSGVNPTLAKEAMKIASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A8E5BFH8_9PHAE (Ribosomal protein L16 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BFH8_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 1.070e-75
Identity = 110/126 (87.30%), Postives = 118/126 (93.65%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPKKT F+KQHRGRLKGKASR NTI+FGDYAIQALEP WLTSRQIEATRRTITRYTKRGGKLWI VFPDKPITAR  ESRMGSGKGSV+YWVA++KPGT+LFELSGVP  +AK+AMKIASYKLP
Sbjct:    1 MLSPKKTNFKKQHRGRLKGKASRNNTIHFGDYAIQALEPVWLTSRQIEATRRTITRYTKRGGKLWIKVFPDKPITARVPESRMGSGKGSVDYWVAIIKPGTVLFELSGVPINIAKEAMKIASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A8E5XRJ0_9PHAE (50S ribosomal protein L16, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ0_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 2.540e-75
Identity = 112/126 (88.89%), Postives = 120/126 (95.24%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPK+TKFRKQHRGRLKGKA RGN INFG+YAIQALEP W+TSRQIEATRRTITRYTKRGGKLWIT+FPDKPITARAAESRMGSGKGSV+YWVAVVKPG+ILFELSGV   +AK+AMKIASYKLP
Sbjct:    1 MLSPKRTKFRKQHRGRLKGKACRGNKINFGNYAIQALEPAWITSRQIEATRRTITRYTKRGGKLWITIFPDKPITARAAESRMGSGKGSVDYWVAVVKPGSILFELSGVSPKIAKEAMKIASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: B2XTE8_HETAK (50S ribosomal protein L16, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTE8_HETAK)

HSP 1 Score: 225 bits (573), Expect = 5.610e-74
Identity = 110/126 (87.30%), Postives = 117/126 (92.86%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            ML PK+TKFRKQHRGRLKGKA RGN I++GDYA+QALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKP+T RAAESRMGSGKG+VEYWVAVVKPG ILFE+SGVP  LAK AMK ASYKLP
Sbjct:    1 MLLPKRTKFRKQHRGRLKGKACRGNKISYGDYALQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPVTFRAAESRMGSGKGAVEYWVAVVKPGKILFEMSGVPLELAKAAMKTASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A7S6UA10_9STRA (50S ribosomal protein L16, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA10_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.820e-72
Identity = 107/126 (84.92%), Postives = 118/126 (93.65%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPK+TK+RK HRGRL+GKA RGNT+NFG+YA+QALEPTWLTSRQIEATRRTITRYT+RGGKLWIT+FPDK ITARA ESRMGSGKG+V+YWVAVVKPGTILFELSGV   LAKDA+K ASYKLP
Sbjct:    1 MLSPKRTKYRKYHRGRLRGKACRGNTVNFGNYALQALEPTWLTSRQIEATRRTITRYTRRGGKLWITIFPDKSITARALESRMGSGKGAVDYWVAVVKPGTILFELSGVSERLAKDAIKTASYKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: B7T1X7_VAULI (50S ribosomal protein L16, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1X7_VAULI)

HSP 1 Score: 221 bits (563), Expect = 2.070e-72
Identity = 106/126 (84.13%), Postives = 119/126 (94.44%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPK+TK+RK+HRGRLKGKASRGN +NFGDY +QALEP W+TSRQIEATRRTITRYTKRGGKLWIT+FP+KP+TARAAESRMGSGKGSV+YWVAVVKPGTILFELSGV   +AK+A+KIAS KLP
Sbjct:    1 MLSPKRTKYRKEHRGRLKGKASRGNKLNFGDYGLQALEPIWITSRQIEATRRTITRYTKRGGKLWITIFPNKPVTARAAESRMGSGKGSVDYWVAVVKPGTILFELSGVSPLIAKEALKIASSKLP 126
[Close]
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Match: A0A1G4NTX4_9FLOR (50S ribosomal protein L16, chloroplastic n=2 Tax=Liagoraceae TaxID=31484 RepID=A0A1G4NTX4_9FLOR)

HSP 1 Score: 219 bits (558), Expect = 1.090e-71
Identity = 105/126 (83.33%), Postives = 116/126 (92.06%), Query Frame = 0 
Query:    1 MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGTILFELSGVPFTLAKDAMKIASYKLP 126
            MLSPK+TKFRKQHRGRLKGKAS+GNTI+FGDYA+QALEP WLTSRQIEATRRTITRY KRGGKLWI VFPDKP+TAR AE+RMGSGKG+ EYWVAV+KPG ILFE++GVP   AK AMK+ASYKLP
Sbjct:    1 MLSPKRTKFRKQHRGRLKGKASKGNTISFGDYALQALEPVWLTSRQIEATRRTITRYVKRGGKLWIRVFPDKPVTARPAETRMGSGKGAPEYWVAVIKPGHILFEMNGVPEKAAKQAMKLASYKLP 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26383.7204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6M0J1_UNDPI3.320e-7993.6550S ribosomal protein L16, chloroplastic n=49 Tax=... [more]
D1J745_ECTSI9.520e-7992.8650S ribosomal protein L16, chloroplastic n=6 Tax=P... [more]
A0A1I9LVW6_9PHAE2.050e-7892.0650S ribosomal protein L16, chloroplastic n=1 Tax=P... [more]
A0A2I4Q2I6_9PHAE1.040e-7692.0650S ribosomal protein L16, chloroplastic n=1 Tax=D... [more]
A0A8E5BFH8_9PHAE1.070e-7587.30Ribosomal protein L16 n=1 Tax=Phaeophyceae sp. Tax... [more]
A0A8E5XRJ0_9PHAE2.540e-7588.8950S ribosomal protein L16, chloroplastic n=1 Tax=I... [more]
B2XTE8_HETAK5.610e-7487.3050S ribosomal protein L16, chloroplastic n=2 Tax=H... [more]
A0A7S6UA10_9STRA1.820e-7284.9250S ribosomal protein L16, chloroplastic n=1 Tax=S... [more]
B7T1X7_VAULI2.070e-7284.1350S ribosomal protein L16, chloroplastic n=1 Tax=V... [more]
A0A1G4NTX4_9FLOR1.090e-7183.3350S ribosomal protein L16, chloroplastic n=2 Tax=L... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000114Ribosomal protein L16PRINTSPR00060RIBOSOMALL16coord: 58..87
score: 60.93
coord: 24..36
score: 48.92
coord: 88..117
score: 53.8
coord: 42..53
score: 61.67
IPR000114Ribosomal protein L16TIGRFAMTIGR01164TIGR01164coord: 2..126
e-value: 2.4E-59
score: 197.0
IPR000114Ribosomal protein L16PANTHERPTHR1222050S/60S RIBOSOMAL PROTEIN L16coord: 1..126
IPR000114Ribosomal protein L16HAMAPMF_01342Ribosomal_L16coord: 1..126
score: 34.71
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 4..126
e-value: 4.2E-45
score: 153.0
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10coord: 1..126
e-value: 2.3E-50
score: 173.0
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 1..126
IPR020798Ribosomal protein L16, conserved sitePROSITEPS00701RIBOSOMAL_L16_2coord: 82..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26383contigH-paniculata_contig26383:3017..3394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26383.7204.1mRNA_H-paniculata_contig26383.7204.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26383 3017..3394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26383.7204.1 ID=prot_H-paniculata_contig26383.7204.1|Name=mRNA_H-paniculata_contig26383.7204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEAT
RRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPG
TILFELSGVPFTLAKDAMKIASYKLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000114Ribosomal_L16
IPR016180Ribosomal_L10e/L16
IPR036920Ribosomal_L10e/L16_sf
IPR020798Ribosomal_L16_CS