mRNA_H-paniculata_contig26374.7201.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig26374.7201.1
Unique NamemRNA_H-paniculata_contig26374.7201.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 150 bits (379), Expect = 2.950e-38
Identity = 108/343 (31.49%), Postives = 164/343 (47.81%), Query Frame = 3
Query:  324 RLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLV-IA*RREKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEGKVTILAPESADKPPEPK---------------------------------PLGAVLTC-KRIFRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLV------------SDAG--GAWH----------------LFEDKSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            +++KS++ LKQS R W      F++ +GF++ ++D C++    +  E   +++VYVDDL+ I    E +DE K  +  R++ KDLG LS +LGI + +D+    I + Q  YI  +LK+Y  D+   V T  +  V +   +    P +P                                  P  A LT  KRI R L    +L +K     N D L  F D DWA D++DR STTG +F L+GGA+SW S+KQ  V            S A   G W                 L +++ AI ++K    H RTKHI +R+H IRE +++ ++ L+Y  T
Sbjct:    2 QIKKSIYGLKQSPRCWNKEFTTFMMDLGFKQSSSDPCVFVRLSQELE---IIAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPVDPSTYQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGNKD-LIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTKPTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPT 340          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: H3H839_PHYRM (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H839_PHYRM)

HSP 1 Score: 156 bits (395), Expect = 3.100e-38
Identity = 108/343 (31.49%), Postives = 173/343 (50.44%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*RREK-IDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEG--KVTILAPESADKPPEPK---PLGAVLTC----------------------------------KRIFRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVS----------------DAGG------AWHLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V +L++SL+ LKQS R W   +DDF++ +GF++  +D C+Y  RD  G+  I V++YVDDLV+A   +K + + K  +S RF   D+G L   LG+++ +D     +S+ Q  + +++L+++  D+   V T  +   K+T    E   K  E     P    + C                                  KR+FR +      GI+     N DGL+ + D DWA D+E R+ST+GY F +NGG ISW S+KQ+ V+                +A G      A +++ED + +I L+K    H RTKHI +R+H +RE + + ++ L+YV T
Sbjct:  560 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GQDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIESQASCN-DGLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEALGEMASDEAVNIYEDHQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVST 899          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 151 bits (382), Expect = 3.720e-38
Identity = 107/357 (29.97%), Postives = 176/357 (49.30%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*RREKIDEF-KHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPT-----------------------------SVEGK---------------VTILAPESADKPPEPKPLGAVLTCKRIFRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVSDAG--------------GAW-----------------HLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V +L++SL+ LKQS R W   +DDF++ +GF++  +D C+Y  RD  G+  I V++YVDDLV+A   +++ E  KH +S+RF   DLG L   LG++++  R +  +++ Q  +++ +L ++   + + V T                             SV G                V +L+  SAD  P P    A+   KR+ R L + P  G++   + +  G+  + D DWA D+E R+ST+GY F +NGG ISW S+KQ+ V+ +                 W                  ++ED + +I L+K    H RTKHI +R+H +RE + + ++ L+YV T
Sbjct:   33 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSAD--PCPTHWQAL---KRVLRYLQATPTHGLEFSRE-DSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVST 381          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA)

HSP 1 Score: 155 bits (392), Expect = 8.840e-38
Identity = 109/353 (30.88%), Postives = 177/353 (50.14%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*-RREKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGV---------------PTSVEGKV------------TILAPESADKPPEPKPLGAVL-----------TC-KRIFRSLSSVPDLGIKLGGK---INGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVSDAG--------------GAW---------------HLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V RL KSL+ LKQ+ R W    D F++ +G+ R   D C YF R  G +  +++ +YVDD+++A   ++ IDE K  ++R F  KDLG  +++LG+ + RDR N  I +SQ  Y++++L R+   +C+ +               P++ EG++            +++      +P   + +G V             C KRI R +    D+ +  GG    ING     +VD D+A D++  KSTTGYVFK+ GGA+SW S+ Q +V+ +                 W                LF D +SA++L++  + H RTKHI V++H IRE ++E  + L+ + T
Sbjct:  923 VCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRF-GKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIING-----YVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEGTVDLQKIHT 1269          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY)

HSP 1 Score: 155 bits (392), Expect = 1.010e-37
Identity = 96/315 (30.48%), Postives = 169/315 (53.65%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*-RREKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEGKVTILAPESADKPPEPKPLGAVLTCKRI----FRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVSDAG--------------GAW---------------HLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V +L KSL+ LKQ+ R W    D F++ +G+ R ++D C+Y+ R   G   IL+ +YVDD+++A   +++I + K  ++R F  KDLG  +++LG+ + RDR N  I +SQ  Y++++L+R++  +C+ +PT +     + +  S     E   +  V     +    F  + + PD+   +G   +   +  +VD D+A D++  KST+GYVF L GGA+SW S+ Q +V+ +                 W                LF D +SA++L+K  + H +TKHI V++H +RE + E  + ++ + T
Sbjct:  938 VCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILL-LYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSDFT-VRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHT 1250          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 149 bits (377), Expect = 1.260e-37
Identity = 106/343 (30.90%), Postives = 169/343 (49.27%), Query Frame = 3
Query:  327 LRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*R-REKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEGKVTILAPESAD----KPPEPKPLGAVL---TC---------------------------KRIFRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQ--------------------------QLVSDAG----GAWHLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            L ++L+  KQ+ R W + L+  L G GF R   D C+Y  R +   + I+V  YVDDL+I  R + +I E K  + R F  K+LG L   LGI++ R+R + TI ++Q  YI+ + +++  ++C+ V T  +    ++ P   +    + P  + +GA++   TC                           KRI + L +  DLG+   G   G+ L  + D  WA D++ R+STTGYVF LNG AISW S++Q                          QL+ D G     A  +F+D +  I L+K  + H RTKHI +++H +RE + ++ + L+Y  T
Sbjct:   41 LMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIIIV--YVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPT 380          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: A0A1J3DEI6_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DEI6_NOCCA)

HSP 1 Score: 151 bits (382), Expect = 1.580e-37
Identity = 112/351 (31.91%), Postives = 169/351 (48.15%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFS-RDEGGETDILVSVYVDDLVIA*RR-EKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEGKV---TILAPESAD--KPPEPKPLGAVLTC----------------------------------KRIFRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVS------------------------------DAGGAWHLFEDKSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V RLRKSL+ LKQ+ R W    D +++ IG+QR   D C+Y   RD  G   I++ +YVDD++IA    + I E K  + R F  KDLG+  ++LG+++RR+R +  + +SQ  YI++VL+R+D    + V T +       T  +P++ +  K  E  P  + + C                                  K + R L    + G+  GG+  G  +  FVD D+A D+++R+STTG+VF L GGAI W S  Q +V+                              D GG     + +SAI L+K    H RTKHI VR+H IRE +   ++ L+ V T
Sbjct:  146 VCRLRKSLYGLKQAPRQWYKRFDSYMLKIGYQRCEYDCCVYVQCRD--GHPPIILLLYVDDMLIAGSNMDDIVELKRLLGREFEMKDLGAAKKILGMEIRRERSSKRLWLSQKAYIQKVLERFDMSGAKPVSTPLANHFNLETAQSPKTGEEIKDMEQVPYASAVGCLMYAMVCTRPDLAQAVSQVSKYMSKPGREHWNAVKWVLRYLKGTAEDGLMFGGQECG-SVVGFVDSDYAGDLDNRRSTTGFVFTLAGGAICWRSVLQTIVAMSTTEAEYMAMGEAAKEALWVQGLVTELGIDQGGVQLHCDSQSAIFLAKNQVYHARTKHIHVRFHKIRELVASGEIILEKVHT 493          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: A0A6A3CT26_HIBSY (Putative galacturonosyltransferase 6 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CT26_HIBSY)

HSP 1 Score: 154 bits (388), Expect = 3.130e-37
Identity = 108/354 (30.51%), Postives = 179/354 (50.56%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETD-ILVSVYVDDLVIA*-RREKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGV--PTSVEGKVTI-LAPESAD------KPPEPKPLGAVL------------------------------TCKRIFRSLSSVPDLGIKLGGK---INGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVSDAG--------------GAW---------------HLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V RL KSL+ LKQ+ R W    D F++ +G+ R   D C YF R   G+ D +++ +YVDD+++A   ++ I+E K  ++R F  KDLGS +++LG+ + RDR N  I +SQ  Y++++L R+   +C+ +  P  +  K++  ++P S +      + P    +G+++                              T KRI R +    ++ +  GG    ING     +VD D+A D++  KSTTGYVFK+ GGA+SW S+ Q +V+ +                 W                LF D +SA++L++  + H RTKHI V++H IRE + E  + ++ + T
Sbjct:  857 VCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRS--GDNDFVILLLYVDDMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFSMQDCKPISTPLPINFKLSSSMSPSSEEERMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGKEHWNTVKRILRYIKGTSNVALCYGGSNLLING-----YVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQSVVATSTTEAEYVAATQASKEAIWLKMLLEELGHNQEYVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVEEGTVDMQKIHT 1203          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: A0A2N9H171_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H171_FAGSY)

HSP 1 Score: 153 bits (386), Expect = 6.210e-37
Identity = 98/324 (30.25%), Postives = 169/324 (52.16%), Query Frame = 3
Query:  318 VRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*-RREKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEGKVTILAPESADKPPEPKPLGAVLTCKRI----FRSLSSVPDLGIKLGGKINGDGL---------EAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVSDAG--------------GAW---------------HLFED-KSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            V +L KSL+ LKQ+ R W    D F++ +G+ R ++D C+Y+ R   G   IL+ +YVDD+++A   ++ I + K  ++R F  KDLG  +++LG+ + RDR N  I +SQ  Y++++L+R++  +C+ +PT +   + I +  S     E   +  V     +    F  + + PD+   +G   +   L           +VD D+A D++  KST+GYVF L GGA+SW S+ Q +V+ +                 W                LF D +SA++L+K  + H +TKHI V++H +RE + E  + ++ + T
Sbjct:  877 VCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILL-LYVDDMLVAGPNKDCITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINLKISSSMSPSNEAERMEMSQVPYASAVGSLMFAMVCTRPDIAQAVGVGTSNAALCYGGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELEHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHT 1199          
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 152 bits (385), Expect = 7.730e-37
Identity = 108/362 (29.83%), Postives = 171/362 (47.24%), Query Frame = 3
Query:  288 FSPSSRDTPFVRRLRKSLHSLKQSGRNWINILDDFLVGIGFQRPTTDSCLYFSRDEGGETDILVSVYVDDLVIA*RREKIDEFKHNISRRFRKKDLGSLSRVLGIDLRRDRPNVTISISQGGYIREVLKRYDFDECRGVPTSVEGKVTILAPESADKP---------PEPKPLGAVL------------------------------TCKRIFRSLSSVPDLGIKLGGKINGDGLEAFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVSDAG--------------GAWHLF-------------------EDKSAINLSKGSSAHCRTKHIGVRWHGIREWIRERKLALKYVQT 1157
            F+P  + +  V RL+K+L+ LKQ+GR W   L   +  +GF R   D  +++ R+  GE+ I+V+  VDDL I    + +D F  +I +RF   DLG L  +LGI++RRDR   TI+ISQ  YI  ++ R++ DE   +   ++    +   +S   P         P  + +G+++                                KR+ R L    +L +  G   N +GL  + D DW    E R S +GYVF L+GGAISW S+KQ +V+ +                 W  +                   +++SAI L+K ++ H RTKHI +R+H IRE +  R + L++ +T
Sbjct: 1163 FAPPEQ-SHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVRLHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAVDNRDIVLEHRRT 1519          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26374.7201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S7JP25_9TELE2.950e-3831.49POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
H3H839_PHYRM3.100e-3831.49Integrase catalytic domain-containing protein n=4 ... [more]
H3GB98_PHYRM3.720e-3829.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q6BCY1_IPOBA8.840e-3830.88Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q... [more]
A0A2N9F319_FAGSY1.010e-3730.48Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
H3GB17_PHYRM1.260e-3730.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1J3DEI6_NOCCA1.580e-3731.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3CT26_HIBSY3.130e-3730.51Putative galacturonosyltransferase 6 n=1 Tax=Hibis... [more]
A0A2N9H171_FAGSY6.210e-3730.25Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2G8RWY5_9APHY7.730e-3729.83Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26374contigH-paniculata_contig26374:1186..2655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score69.7
Seed ortholog evalue1.1e-09
Seed eggNOG ortholog3750.XP_008388960.1
KEGG koko:K02350
KEGG Pathwayko01100,ko01524,ko03460,map01100,map01524,map03460
KEGG ModuleM00293
Hectar predicted targeting categoryother localisation
GOsGO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010225,GO:0016035,GO:0018130,GO:0019438,GO:0019985,GO:0032991,GO:0033554,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0042276,GO:0042575,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071214,GO:0071478,GO:0071482,GO:0071494,GO:0071704,GO:0071897,GO:0090304,GO:0104004,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.DNA polymerase
EggNOG OGs37RRF@33090,3GCAV@35493,COG0417@1,COG2801@1,KOG0017@2759,KOG0968@2759
EC2.7.7.7
COG Functional cat.L
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Exons4
Model size1157
Cds size393
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26374.7201.1prot_H-paniculata_contig26374.7201.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig26374 2180..2643 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929789.0131319-UTR-H-paniculata_contig26374:1185..13501622929789.0131319-UTR-H-paniculata_contig26374:1185..1350Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 1186..1350 -
1691481011.2110078-UTR-H-paniculata_contig26374:1185..13501691481011.2110078-UTR-H-paniculata_contig26374:1185..1350Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 1186..1350 -
1622929789.0324814-UTR-H-paniculata_contig26374:1441..16431622929789.0324814-UTR-H-paniculata_contig26374:1441..1643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 1442..1643 -
1691481011.2286396-UTR-H-paniculata_contig26374:1441..16431691481011.2286396-UTR-H-paniculata_contig26374:1441..1643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 1442..1643 -
1622929789.0517755-UTR-H-paniculata_contig26374:1794..21791622929789.0517755-UTR-H-paniculata_contig26374:1794..2179Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 1795..2179 -
1691481011.2423918-UTR-H-paniculata_contig26374:1794..21791691481011.2423918-UTR-H-paniculata_contig26374:1794..2179Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 1795..2179 -
1622929789.120988-UTR-H-paniculata_contig26374:2643..26551622929789.120988-UTR-H-paniculata_contig26374:2643..2655Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 2644..2655 -
1691481011.2778518-UTR-H-paniculata_contig26374:2643..26551691481011.2778518-UTR-H-paniculata_contig26374:2643..2655Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26374 2644..2655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929789.0685797-CDS-H-paniculata_contig26374:2179..23961622929789.0685797-CDS-H-paniculata_contig26374:2179..2396Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26374 2180..2396 -
1691481011.2514923-CDS-H-paniculata_contig26374:2179..23961691481011.2514923-CDS-H-paniculata_contig26374:2179..2396Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26374 2180..2396 -
1622929789.105376-CDS-H-paniculata_contig26374:2467..26431622929789.105376-CDS-H-paniculata_contig26374:2467..2643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26374 2468..2643 -
1691481011.2674916-CDS-H-paniculata_contig26374:2467..26431691481011.2674916-CDS-H-paniculata_contig26374:2467..2643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26374 2468..2643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig26374.7201.1

>prot_H-paniculata_contig26374.7201.1 ID=prot_H-paniculata_contig26374.7201.1|Name=mRNA_H-paniculata_contig26374.7201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MEEEWRALVKNGTWESKVPGRLPVGRKAIRTKWIFKQKLKEDSCVARYKA
RLVSQAFHTLAAEHDFELESMDVDAAYVNVPVEELYVKLPSCFLLPPETH
HLCAACVKACIASSRVAETGLTFLTIFLLG*
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mRNA from alignment at H-paniculata_contig26374:1186..2655-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig26374.7201.1 ID=mRNA_H-paniculata_contig26374.7201.1|Name=mRNA_H-paniculata_contig26374.7201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig26374:1186..2655- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGTGCGCGGCAATGGAGGAGGAATGGAGGGCGTTGGTGAAAAATGGGAC ATGGGAAAGCAAAGTTCCGGGAAGGTTACCGGTAGGGCGGAAGGCGATTC GTACGAAATGGATTTTCAAGCAGAAACTGAAGGAGGACAGCTGCGTTGCA CGTTACAAAGCGCGACTAGTGAGTCAGGCTTTTCACACGTGGAGGGTGAA GATTTCTTTAAAATCGGTGCCCCCGTAGCTCGCATGTCGACGTTACGTAC TGTTTTTAGCCTGGCCGCCGAACACGATTTCGAATTAGAAAGCATGGACG TAGATGCGGCGTATGTGAACGTCCCCGTAGAAGAGCTGTATGTTAAGCTA CCCTCTTGTTTTCTCCTTCCTCCCGAGACACACCATTTGTGCGCCGCCTG CGTAAAAGCCTGCATAGCCTCAAGCAGAGTGGCCGAAACTGGATTAACAT TCTTGACGATTTTCTTGTTGGGATAGGATTCCAGCGTCCCACTACCGACT CATGCTTGTACTTCTCTCGCGACGAAGGGGGAGAGACAGACATTCTCGTG AGCGTCTATGTTGATGACCTAGTCATCGCTTGACGTCGTGAGAAAATAGA CGAGTTCAAGCACAACATAAGTCGGCGTTTCAGGAAGAAAGACTTGGGCT CCCTCTCGCGCGTGTTGGGAATAGATCTACGACGTGACCGCCCTAATGTT ACCATATCAATATCCCAAGGTGGCTACATCCGCGAGGTACTGAAAAGATA CGATTTTGACGAGTGTCGAGGAGTGCCCACATCTGTAGAGGGAAAAGTGA CGATTTTGGCACCCGAGTCGGCCGACAAGCCCCCCGAACCGAAACCACTT GGGGCTGTACTGTCGGACATAGGTGCAAGATTACAAGAATCATATAACGC GTACGGTTGAGGTTGCGTCATGACGCGCCAGCAGATGATTGGCCCGTGTG GAAAGTCTGGATGTACACGAAGCAGCACGTCGTATGGAAGACCCATGTCG GGAAGACTTCAGTACATGCAAGCGCATTTTTCGTTCTCTCAGTAGTGTGC CTGACCTCGGCATTAAACTCGGCGGTAAGATTAATGGCGATGGCCTGGAA GCATTCGTTGATGTCGATTGGGCGGAAGATGTGGAGGACCGAAAGTCCAC AACAGGATACGTTTTCAAGCTGAATGGTGGTGCGATAAGTTGGTGCTCTA GGAAGCAACAGTTAGTCGCGTGGTCCAGTACAGAGGCAGAGTACGTTGCT GCAGGAGAAGCGGGAAAGGAGATGGTATATTTTAGGGATTTACTAGGATC GATAGGTTTCGGATGCAGGGGGGGCATGGCATTTATTTGAGGACAAGTCA GCTATCAATCTCAGTAAAGGATCTAGCGCACACTGCAGAACAAAGCACAT CGGAGTGCGCTGGCACGGAATTCGAGAGTGGATTCGGGAAAGAAAATTGG CGTTGAAATACGTGCAGACC
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Coding sequence (CDS) from alignment at H-paniculata_contig26374:1186..2655-

>mRNA_H-paniculata_contig26374.7201.1 ID=mRNA_H-paniculata_contig26374.7201.1|Name=mRNA_H-paniculata_contig26374.7201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig26374:1186..2655- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGAGGAATGGAGGGCGTTGGTGAAAAATGGGACATGGGAAAGCAA
AGTTCCGGGAAGGTTACCGGTAGGGCGGAAGGCGATTCGTACGAAATGGA
TTTTCAAGCAGAAACTGAAGGAGGACAGCTGCGTTGCACGTTACAAAGCG
CGACTAGTGAGTCAGGCTTTTCACACATGGAGGAGGAATGGAGGGCGTTG
GTGAAAAATGGGACATGGGAAAGCAAAGTTCCGGGAAGGTTACCGGTAGG
GCGGAAGGCGATTCGTACGAAATGGATTTTCAAGCAGAAACTGAAGGAGG
ACAGCTGCGTTGCACGTTACAAAGCGCGACTAGTGAGTCAGGCTTTTCAC
ACCCTGGCCGCCGAACACGATTTCGAATTAGAAAGCATGGACGTAGATGC
GGCGTATGTGAACGTCCCCGTAGAAGAGCTGTATGTTAAGCTACCCTCTT
GTTTTCTCCTTCCTCCCGAGACACACCATTTGTGCGCCGCCTGCGTAAAA
GCCTGCATAGCCTCAAGCAGAGTGGCCGAAACTGGATTAACATTCTTGAC
GATTTTCTTGTTGGGATAGCCTGGCCGCCGAACACGATTTCGAATTAGAA
AGCATGGACGTAGATGCGGCGTATGTGAACGTCCCCGTAGAAGAGCTGTA
TGTTAAGCTACCCTCTTGTTTTCTCCTTCCTCCCGAGACACACCATTTGT
GCGCCGCCTGCGTAAAAGCCTGCATAGCCTCAAGCAGAGTGGCCGAAACT
GGATTAACATTCTTGACGATTTTCTTGTTGGGATAG
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