mRNA_H-paniculata_contig2635.7197.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 1.750e-143 Identity = 229/275 (83.27%), Postives = 249/275 (90.55%), Query Frame = 1
Query: 1 QTAVGGSDEERALRKKNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 825
Q AVGGSDEERALR+K K+K+KED RF AVKSAIIKRLGDTCDLLAKEP +KDP AVI+K NAV+SNLRALEENWK+LD AYQAEK+KRRSKITREELE +RQLLVDLRHEIGELKSIHQAGVVG+KGGGTRGGYGTAMPASEFFKQEART G + V E PP GKLT EQ RIQQIRDRKKEMEDKYLTVVEEHV+RLGEMAKNI EEL +QDRMVDDLGNR+DTA EHV NVN RMKEVLK+VR+ADKFCMDIMCILLL+GM+AVLYA++
Sbjct: 20 QAAVGGSDEERALRRK-KRKSKEDDRFNAVKSAIIKRLGDTCDLLAKEPASKDPTAVIQKKNAVQSNLRALEENWKQLDSAYQAEKSKRRSKITREELENQRQLLVDLRHEIGELKSIHQAGVVGAKGGGTRGGYGTAMPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.380e-71 Identity = 140/282 (49.65%), Postives = 190/282 (67.38%), Query Frame = 1
Query: 7 AVGGSDEERALRKKNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTK---------DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 825
+VGG D L KKK+ +D RF VK+++++RL +TC+L+ K T DPKAVI++N +RSNLR LE W E+D +QAE+ KRRSK+T+EE+E RRQLLVDL+ EI ELK+++Q VG+ G Y P A G E PA L+ EQ +RIQQIR+R KEME+ YL+ +EEHV+RLG++A+ + EEL +Q+RM+DDLGNR+++ E + NVN RMK+ LK VRAADKFC+DIMC+LL++G+ AVLYA+I N
Sbjct: 22 SVGGDD----LESGGKKKSSKDDRFNLVKASVMRRLTETCELMEKAAATSGGGLASSTADPKAVIKRNQDIRSNLRTLEAEWGEMDVMFQAERTKRRSKMTKEEMEARRQLLVDLQREIAELKALNQQAAVGASVGVASSAYAAFKPQDSAA---ALAGGAKGGAEVRPAN-LSNEQHYRIQQIRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: B8LD27_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD27_THAPS) HSP 1 Score: 134 bits (338), Expect = 8.230e-31 Identity = 97/261 (37.16%), Postives = 146/261 (55.94%), Query Frame = 1
Query: 46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTK--DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGT---AMPASEFFKQEARTSGTSTVQETPPAGK-LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLY 807
K KK K+ RF +KS I+ RL L+ ++ +K +PK I +R +R + W EL+ Y+ E K++SK T EELE ++ L++ L EI ++K G G G G A+ A + + G S ++ P+G LT QQ ++QQIRDR E D+ L + E ++ L E+A+ EE+ Q+ M++ +GN++D A+EH+VNVN +MK+ L V R++DK C+DIMCILL VG AV Y
Sbjct: 101 KGKKGQKKGSRFLELKSNIVDRLKSVHSLIEEQSNSKRNNPKEAIAAQAEIRELIRQASDEWSELNELYKKEARKKKSKFTSEELELQQALVMQLNVEIEKVKEAQLQGYANRSGNGMDEGVRLNLGALAALDAVDISSGGEGNSKAWQSGPSGTALTGSQQVQLQQIRDRDAEF-DQDLDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFY 360
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: W7UCC1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCC1_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.000e-28 Identity = 97/279 (34.77%), Postives = 157/279 (56.27%), Query Frame = 1
Query: 22 DEERALRKKNKKKNKEDGR---FAAVKSAIIKRLGDTCDLLA--KEPTT---KDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPA--SEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALINNN 825
D +RA+ K KK KE G+ F +K +I R+ D +L+A K T+ PK VI N +R ++R L+E+ KELD +Q E+NKR+SK + EELE R +++ + EI ELK + AG + K T G G P S+ F+ + P +T+ Q ++QQI+ R K+++ +YL +E+ VE L ++A NE + + M+++L ++ +H+ VN +MK L V R +DK C+D++CI++L+GM+ V+Y L N+
Sbjct: 65 DIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN-TPGAVGLFAPVEESDAFR--------GPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNS 334
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S1BK55_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BK55_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.840e-27 Identity = 99/275 (36.00%), Postives = 147/275 (53.45%), Query Frame = 1
Query: 76 RFAAVKSAIIKRLGDTCDLLAKEPTTK-----DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPP-----AGK--------------LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRA-ADKFCMDIMCILLLVGMLAVLYALINNN 825
+F A+KS II + D L KE + +PKAVI+ + VR +L+ L++ WK+LDG Y+ E NKRRSK T EELE ++Q++ L+ EI +L+ + + +A PA E+ G S V P AG+ +T QQ ++ QI+ R E DK + + E ++ L E+A NEE++ Q+ M+D LGNR+D E V++VN RMKE L+SV K C+DIMC++L V + VL ++I N
Sbjct: 54 KFLALKSDIIDHVQDIRALQEKEGLMEAASGVNPKAVIQIQHEVRQHLKDLDDEWKQLDGMYRTEVNKRRSKFTTEELEMQQQMIFQLQREIYQLREAERGAFAAASS--------SAAPAINAKSIESVIGGGSNVGGKSPLWQAAAGQERNRIEGGGGGQVEMTSYQQQQLDQIQMRDNEF-DKDIEQIGEGIKDLQEIALAANEEVNRQNVMIDSLGNRIDGVQERVISVNQRMKETLRSVGGRGSKLCVDIMCVMLSVVIGLVLLSMILNK 319
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S3PYZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ1_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.870e-27 Identity = 98/296 (33.11%), Postives = 149/296 (50.34%), Query Frame = 1
Query: 46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTK--------------DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIH-------------QAGVVGSK---------GGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 825
K +K K RF +KS+I++RL LL +E +PK VI + A+R +R E W+ELD Y+ E KR+SK T+EEL+ ++ L+ L E+ + KS+ A V+ ++ G G GG G + + + +G +LTQ+Q ++QQI DR KE D+ L + E ++ L E+A Q+ M ++G ++D A EH+ VNT+MK+ L VRAADK C+D+MCI+L+VGM AVLY +I +
Sbjct: 50 KGRKAKKAGSRFLELKSSIVERLRTLQKLLEEEDERNRGGTGLNFAVAHGNNPKEVIARQAAMREEIRMATEEWEELDSLYRNEARKRKSKFTQEELDFQQTLVQRLGAELEKAKSLQGKGYARIGTGRDSDAAVLNTQALNIIDMDDGDGFLGGGGGSALGNXXXXXXXQDNG---------GVELTQQQHLQLQQINDRDKEF-DQELDQIGEGIQDLSELAXXXXXXXXRQNVMXXNVGQKIDDAQEHLSTVNTKMKDTLNEVRAADKICVDVMCIVLMVGMAAVLYKMIASG 335
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S0BZ32_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ32_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.900e-27 Identity = 89/275 (32.36%), Postives = 152/275 (55.27%), Query Frame = 1
Query: 46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEP----------TTKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGT----AMPASEFFKQEARTSGTSTVQETP--PAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALIN 819
+ KK K+ RF +KS++I +L +LL ++ + +PK VI +R ++R++ E W E+D Y+ E K+RSK + ELE ++ L++ L+ EI +++ + Q G + S G T A+ A++F ++ + S P +LT +Q+ +++QI R E D+ L ++ + ++ L E+A EE+ Q+ M++ +G ++D N+H+ NVN+RMKE L V R+ADK C+DIMCI L +G AV Y +I
Sbjct: 24 RGKKAEKKGMRFLELKSSVIDQLKTVHELLGEQEKRNTGKISVASGNNPKDVIAAQATIREHIRSMHEEWSEMDTLYKNEARKKRSKFSESELEIQQTLVLRLQDEIEKVREVQQRGFMKSPGETVAVALNTKALAALQATDFSSTTSKANDWSGAGGGVGGPEAELTDQQRLQMEQIDKRDAEF-DQDLDIIGQGIQDLSEIAALQGEEVKRQNVMLESVGKKIDNVNDHLGNVNSRMKETLDEVGRSADKLCVDIMCIALALGFAAVFYRIIK 297
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.250e-26 Identity = 82/253 (32.41%), Postives = 135/253 (53.36%), Query Frame = 1
Query: 79 FAAVKSAIIKRLGDTCDLLAKEPTTKDPKAV-----IEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINN 822
F K I+ RL DT + + T+ AV I K VR+ + L ++W+EL E +K++SK T EE+ R ++ D++ + LK+ A G + ++ A +Q A + G +++ +Q R+ QI+ +EM DK + ++ E VE LG +AK +NEEL VQ +M+D+L V+ A EHV N+N ++ + LK VR +DK C+DI+C+LLL+G++ V+ L +
Sbjct: 61 FMLTKHRIMVRLADTEERVEDCIRTRTENAVAQDVKIRKQQEVRARFKDLTKDWEELSALLSKETSKKKSKFTAEEIRSRTAIVRDIKDHLDTLKAQFTASYSGVQMDASQTLPSFASLKRSIDQQSASSGGQGAASVVVEQERISSQQNQRLAQIQATDREM-DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVMIQLARS 312
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: K0SY08_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SY08_THAOC) HSP 1 Score: 114 bits (285), Expect = 3.190e-24 Identity = 88/265 (33.21%), Postives = 141/265 (53.21%), Query Frame = 1
Query: 46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPT--TKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRG------GYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYAL 813
K +K K+ RF +KS I+ L + L+ ++ + +PK I +R +R + W EL+ Y+ E K++SK T EELE ++ L++ L+ EI ++K Q G ++GG T G A+ A++ + G + T LT QQ ++Q I+DR E DK L + + ++ L E+A EE+ Q+ M+ R+D A EH+ NVN +MK+ L V R++DK C+DIMCI++++G AV Y L
Sbjct: 48 KGRKGQKKGSRFLELKSNIVAGLKNVHSLIEQQSNAVSLNPKDSITAQAEIREVIRQASDEWNELNEIYKKEARKKKSKFTEEELEVQQALVMQLKQEIDKVKDAQQGGY--ARGGATLQNSQLNLGALAALDAADLSSNDPSGGGRAWQSGTGGTA-LTGNQQVQLQAIQDRDAEF-DKDLDEIGDGIQDLHELALRQGEEVRRQNEMLKGTEQRMDQAQEHMTNVNAKMKDTLNEVGRSSDKLCVDIMCIVMMMGFAAVFYQL 308
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2XIT6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIT6_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.610e-23 Identity = 93/266 (34.96%), Postives = 145/266 (54.51%), Query Frame = 1
Query: 52 KKKNKEDGRFAAVKSAIIKRLGDTCDLLA----KEPT-----TKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGK-LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALI 816
KK K RF +KS+I+ RL D ++A KE + + K I VR +R + WKEL+ Y+ E K+RSK T +ELE ++ L++ L+ EI + K Q G A A+E A TSG + G LT QQ +IQ +++R E D L + E ++ L E+A+ +EE+ Q++M+DD+G ++D+ +EHV NVN ++K+ LK V R++DK C+DIMCI+L++G VL+ ++
Sbjct: 49 KKSQKTGSRFLELKSSIVGRLQDIHGMIADSKQKEKSRVGFQVNEQKETIAAQAKVREEIRQATDEWKELENIYRNEARKKRSKFTPDELEVQQVLVMKLQDEIEKCKEASQGTGRRMDPQGQLNSDNLAFLAAEDIY--APTSGGKGGWKGGTKGAALTGGQQSQIQALQERDAEF-DTQLDDIGEGIQDLAEIAELQSEEVKRQNQMLDDMGIKMDSVHEHVQNVNLKLKDTLKEVGRSSDKLCVDIMCIVLMLGFAGVLFKML 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2635.7197.1 >prot_H-paniculata_contig2635.7197.1 ID=prot_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp MPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYback to top mRNA from alignment at H-paniculata_contig2635:6054..11277- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2635.7197.1 ID=mRNA_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5224bp|location=Sequence derived from alignment at H-paniculata_contig2635:6054..11277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2635:6054..11277- >mRNA_H-paniculata_contig2635.7197.1 ID=mRNA_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig2635:6054..11277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |