prot_H-paniculata_contig2635.7197.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2635.7197.1
Unique Nameprot_H-paniculata_contig2635.7197.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length138
Homology
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.400e-66
Identity = 110/137 (80.29%), Postives = 120/137 (87.59%), Query Frame = 0
Query:    1 MPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 137
            MPASEFFKQEART G + V E PP GKLT EQ  RIQQIRDRKKEMEDKYLTVVEEHV+RLGEMAKNI EEL +QDRMVDDLGNR+DTA EHV NVN RMKEVLK+VR+ADKFCMDIMCILLL+GM+AVLYA++   
Sbjct:  157 MPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.230e-37
Identity = 70/117 (59.83%), Postives = 95/117 (81.20%), Query Frame = 0
Query:   21 ETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 137
            E  PA  L+ EQ +RIQQIR+R KEME+ YL+ +EEHV+RLG++A+ + EEL +Q+RM+DDLGNR+++  E + NVN RMK+ LK VRAADKFC+DIMC+LL++G+ AVLYA+I N 
Sbjct:  180 EVRPAN-LSNEQHYRIQQIRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2UZ99_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ99_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.400e-26
Identity = 51/110 (46.36%), Postives = 83/110 (75.45%), Query Frame = 0
Query:   28 LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 137
            +T +Q+ R++Q++ R K+M+D++LT + E V+ + E+A   NEE+ +Q  M+D+LGNR+D AN H  +VNT++KE LK VR ADK CMDI+CI+++V M+ ++Y+L  N+
Sbjct:    7 MTADQRRRLEQLQIRDKQMDDEHLTKIGEAVDDIKEIALAANEEVKLQSVMIDNLGNRIDIANTHAESVNTKLKETLKKVRGADKLCMDIICIVIMVAMVGIIYSLYKNS 116          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S3XQY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQY8_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 4.880e-19
Identity = 45/110 (40.91%), Postives = 73/110 (66.36%), Query Frame = 0
Query:   28 LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 137
            +T EQQ R++ ++ R +E + ++LT +E+ VE   E+A   NEE+  Q  ++D L ++++   EH    N R+K+V+K VR ADKFCMDI C++L++GML +LY+L    
Sbjct:   17 VTAEQQRRLELLQQRDREQDAEHLTRIEQGVEDALEIALVANEEVKRQGVLLDQLDDKLEAVTEHADTTNRRLKDVIKQVRGADKFCMDIFCVVLMLGMLGILYSLAREQ 126          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.630e-19
Identity = 50/129 (38.76%), Postives = 81/129 (62.79%), Query Frame = 0
Query:    8 KQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINN 136
            +Q A + G           +++ +Q  R+ QI+   +EM DK + ++ E VE LG +AK +NEEL VQ +M+D+L   V+ A EHV N+N ++ + LK VR +DK C+DI+C+LLL+G++ V+  L  +
Sbjct:  185 QQSASSGGQGAASVVVEQERISSQQNQRLAQIQATDREM-DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVMIQLARS 312          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S3PYZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.110e-18
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 0
Query:   28 LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 137
            LTQ+Q  ++QQI DR KE  D+ L  + E ++ L E+A         Q+ M  ++G ++D A EH+  VNT+MK+ L  VRAADK C+D+MCI+L+VGM AVLY +I + 
Sbjct:  227 LTQQQHLQLQQINDRDKEF-DQELDQIGEGIQDLSELAXXXXXXXXRQNVMXXNVGQKIDDAQEHLSTVNTKMKDTLNEVRAADKICVDVMCIVLMVGMAAVLYKMIASG 335          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2Q5H6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5H6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.580e-18
Identity = 46/111 (41.44%), Postives = 77/111 (69.37%), Query Frame = 0
Query:   28 LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALINNN 137
            +T  QQ ++QQIRDR  E  D+ L  + E ++ L E+A    EE+  Q++M+ ++G+++D A+EH++NVN +MK+ L  V R++DK C+DIMCI+L +G++AV+Y +    
Sbjct:   37 MTGSQQVQLQQIRDRDAEF-DQDLDEIGEGIQDLHELALRQGEEVKRQNQMLQEVGSKIDNAHEHMINVNAKMKDTLNEVGRSSDKLCVDIMCIVLGIGLIAVIYKMATGG 146          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: B8LD27_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD27_THAPS)

HSP 1 Score: 87.8 bits (216), Expect = 7.740e-18
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0
Query:   15 GTSTVQETPPAGK-LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLY 131
            G S   ++ P+G  LT  QQ ++QQIRDR  E  D+ L  + E ++ L E+A+   EE+  Q+ M++ +GN++D A+EH+VNVN +MK+ L  V R++DK C+DIMCILL VG  AV Y
Sbjct:  243 GNSKAWQSGPSGTALTGSQQVQLQQIRDRDAEF-DQDLDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFY 360          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S1TVQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVQ5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.960e-14
Identity = 49/142 (34.51%), Postives = 78/142 (54.93%), Query Frame = 0
Query:    1 MPASEFFKQEARTSGTSTVQETPPAG------KLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINN 136
            M  SE FK  A   G  TV  +  A        +T EQ+ ++Q +  R+ E+++KY+  + E ++ L E A+N  E L  QDR + ++  + D   + +  VN  MKE L   R +DK CMDIMCI+ ++G++ VLY +  +
Sbjct:  156 MEDSELFK--ATGDGDGTVNPSGYAAGQSANNNMTAEQKQQLQALEARENEIDEKYVAQIGEGLDYLLEKAENFGERLREQDRKITEIQEKADEVTDRLETVNGSMKETLNKARGSDKICMDIMCIMAMLGLIGVLYQMTTS 295          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S0BZ32_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ32_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.040e-14
Identity = 46/113 (40.71%), Postives = 73/113 (64.60%), Query Frame = 0
Query:   24 PAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALIN 135
            P  +LT +Q+ +++QI  R  E  D+ L ++ + ++ L E+A    EE+  Q+ M++ +G ++D  N+H+ NVN+RMKE L  V R+ADK C+DIMCI L +G  AV Y +I 
Sbjct:  186 PEAELTDQQRLQMEQIDKRDAEF-DQDLDIIGQGIQDLSEIAALQGEEVKRQNVMLESVGKKIDNVNDHLGNVNSRMKETLDEVGRSADKLCVDIMCIALALGFAAVFYRIIK 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE1.400e-6680.29t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YY22_9STRA1.230e-3759.83Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2UZ99_9STRA1.400e-2646.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQY8_HETAK4.880e-1940.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RAR9_9STRA8.630e-1938.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PYZ1_9STRA3.110e-1845.45Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2Q5H6_9STRA4.580e-1841.44Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8LD27_THAPS7.740e-1846.22Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S1TVQ5_9STRA1.960e-1434.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0BZ32_9STRA2.040e-1440.71Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..56
NoneNo IPR availableGENE3D1.20.5.110coord: 48..109
e-value: 2.9E-14
score: 54.8
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 25..129
NoneNo IPR availablePANTHERPTHR19957:SF258coord: 25..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 34..103
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 77..127
e-value: 2.7E-7
score: 30.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 41..103
score: 11.21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2635contigH-paniculata_contig2635:7324..9757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2635.7197.1mRNA_H-paniculata_contig2635.7197.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2635 6054..11277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2635.7197.1 ID=prot_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKY
LTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRM
KEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom