mRNA_H-paniculata_contig2635.7197.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2635.7197.1
Unique NamemRNA_H-paniculata_contig2635.7197.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 1.750e-143
Identity = 229/275 (83.27%), Postives = 249/275 (90.55%), Query Frame = 1
Query:    1 QTAVGGSDEERALRKKNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 825
            Q AVGGSDEERALR+K K+K+KED RF AVKSAIIKRLGDTCDLLAKEP +KDP AVI+K NAV+SNLRALEENWK+LD AYQAEK+KRRSKITREELE +RQLLVDLRHEIGELKSIHQAGVVG+KGGGTRGGYGTAMPASEFFKQEART G + V E PP GKLT EQ  RIQQIRDRKKEMEDKYLTVVEEHV+RLGEMAKNI EEL +QDRMVDDLGNR+DTA EHV NVN RMKEVLK+VR+ADKFCMDIMCILLL+GM+AVLYA++   
Sbjct:   20 QAAVGGSDEERALRRK-KRKSKEDDRFNAVKSAIIKRLGDTCDLLAKEPASKDPTAVIQKKNAVQSNLRALEENWKQLDSAYQAEKSKRRSKITREELENQRQLLVDLRHEIGELKSIHQAGVVGAKGGGTRGGYGTAMPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.380e-71
Identity = 140/282 (49.65%), Postives = 190/282 (67.38%), Query Frame = 1
Query:    7 AVGGSDEERALRKKNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTK---------DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 825
            +VGG D    L    KKK+ +D RF  VK+++++RL +TC+L+ K   T          DPKAVI++N  +RSNLR LE  W E+D  +QAE+ KRRSK+T+EE+E RRQLLVDL+ EI ELK+++Q   VG+  G     Y    P        A   G     E  PA  L+ EQ +RIQQIR+R KEME+ YL+ +EEHV+RLG++A+ + EEL +Q+RM+DDLGNR+++  E + NVN RMK+ LK VRAADKFC+DIMC+LL++G+ AVLYA+I N 
Sbjct:   22 SVGGDD----LESGGKKKSSKDDRFNLVKASVMRRLTETCELMEKAAATSGGGLASSTADPKAVIKRNQDIRSNLRTLEAEWGEMDVMFQAERTKRRSKMTKEEMEARRQLLVDLQREIAELKALNQQAAVGASVGVASSAYAAFKPQDSAA---ALAGGAKGGAEVRPAN-LSNEQHYRIQQIRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: B8LD27_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD27_THAPS)

HSP 1 Score: 134 bits (338), Expect = 8.230e-31
Identity = 97/261 (37.16%), Postives = 146/261 (55.94%), Query Frame = 1
Query:   46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTK--DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGT---AMPASEFFKQEARTSGTSTVQETPPAGK-LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLY 807
            K KK  K+  RF  +KS I+ RL     L+ ++  +K  +PK  I     +R  +R   + W EL+  Y+ E  K++SK T EELE ++ L++ L  EI ++K     G     G G   G      A+ A +     +   G S   ++ P+G  LT  QQ ++QQIRDR  E  D+ L  + E ++ L E+A+   EE+  Q+ M++ +GN++D A+EH+VNVN +MK+ L  V R++DK C+DIMCILL VG  AV Y
Sbjct:  101 KGKKGQKKGSRFLELKSNIVDRLKSVHSLIEEQSNSKRNNPKEAIAAQAEIRELIRQASDEWSELNELYKKEARKKKSKFTSEELELQQALVMQLNVEIEKVKEAQLQGYANRSGNGMDEGVRLNLGALAALDAVDISSGGEGNSKAWQSGPSGTALTGSQQVQLQQIRDRDAEF-DQDLDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFY 360          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: W7UCC1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCC1_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.000e-28
Identity = 97/279 (34.77%), Postives = 157/279 (56.27%), Query Frame = 1
Query:   22 DEERALRKKNKKKNKEDGR---FAAVKSAIIKRLGDTCDLLA--KEPTT---KDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPA--SEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALINNN 825
            D +RA+  K KK  KE G+   F  +K  +I R+ D  +L+A  K  T+     PK VI  N  +R ++R L+E+ KELD  +Q E+NKR+SK + EELE R +++  +  EI ELK +  AG +  K   T G  G   P   S+ F+          +   P    +T+  Q ++QQI+ R K+++ +YL  +E+ VE L ++A   NE +   + M+++L  ++    +H+  VN +MK  L  V R +DK C+D++CI++L+GM+ V+Y L  N+
Sbjct:   65 DIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN-TPGAVGLFAPVEESDAFR--------GPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNS 334          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S1BK55_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BK55_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.840e-27
Identity = 99/275 (36.00%), Postives = 147/275 (53.45%), Query Frame = 1
Query:   76 RFAAVKSAIIKRLGDTCDLLAKEPTTK-----DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPP-----AGK--------------LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRA-ADKFCMDIMCILLLVGMLAVLYALINNN 825
            +F A+KS II  + D   L  KE   +     +PKAVI+  + VR +L+ L++ WK+LDG Y+ E NKRRSK T EELE ++Q++  L+ EI +L+   +     +          +A PA      E+   G S V    P     AG+              +T  QQ ++ QI+ R  E  DK +  + E ++ L E+A   NEE++ Q+ M+D LGNR+D   E V++VN RMKE L+SV     K C+DIMC++L V +  VL ++I N 
Sbjct:   54 KFLALKSDIIDHVQDIRALQEKEGLMEAASGVNPKAVIQIQHEVRQHLKDLDDEWKQLDGMYRTEVNKRRSKFTTEELEMQQQMIFQLQREIYQLREAERGAFAAASS--------SAAPAINAKSIESVIGGGSNVGGKSPLWQAAAGQERNRIEGGGGGQVEMTSYQQQQLDQIQMRDNEF-DKDIEQIGEGIKDLQEIALAANEEVNRQNVMIDSLGNRIDGVQERVISVNQRMKETLRSVGGRGSKLCVDIMCVMLSVVIGLVLLSMILNK 319          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S3PYZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.870e-27
Identity = 98/296 (33.11%), Postives = 149/296 (50.34%), Query Frame = 1
Query:   46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPTTK--------------DPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIH-------------QAGVVGSK---------GGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN 825
            K +K  K   RF  +KS+I++RL     LL +E                  +PK VI +  A+R  +R   E W+ELD  Y+ E  KR+SK T+EEL+ ++ L+  L  E+ + KS+               A V+ ++         G G  GG G +   +       + +G           +LTQ+Q  ++QQI DR KE  D+ L  + E ++ L E+A         Q+ M  ++G ++D A EH+  VNT+MK+ L  VRAADK C+D+MCI+L+VGM AVLY +I + 
Sbjct:   50 KGRKAKKAGSRFLELKSSIVERLRTLQKLLEEEDERNRGGTGLNFAVAHGNNPKEVIARQAAMREEIRMATEEWEELDSLYRNEARKRKSKFTQEELDFQQTLVQRLGAELEKAKSLQGKGYARIGTGRDSDAAVLNTQALNIIDMDDGDGFLGGGGGSALGNXXXXXXXQDNG---------GVELTQQQHLQLQQINDRDKEF-DQELDQIGEGIQDLSELAXXXXXXXXRQNVMXXNVGQKIDDAQEHLSTVNTKMKDTLNEVRAADKICVDVMCIVLMVGMAAVLYKMIASG 335          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S0BZ32_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ32_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.900e-27
Identity = 89/275 (32.36%), Postives = 152/275 (55.27%), Query Frame = 1
Query:   46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEP----------TTKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGT----AMPASEFFKQEARTSGTSTVQETP--PAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALIN 819
            + KK  K+  RF  +KS++I +L    +LL ++           +  +PK VI     +R ++R++ E W E+D  Y+ E  K+RSK +  ELE ++ L++ L+ EI +++ + Q G + S G        T    A+ A++F    ++ +  S        P  +LT +Q+ +++QI  R  E  D+ L ++ + ++ L E+A    EE+  Q+ M++ +G ++D  N+H+ NVN+RMKE L  V R+ADK C+DIMCI L +G  AV Y +I 
Sbjct:   24 RGKKAEKKGMRFLELKSSVIDQLKTVHELLGEQEKRNTGKISVASGNNPKDVIAAQATIREHIRSMHEEWSEMDTLYKNEARKKRSKFSESELEIQQTLVLRLQDEIEKVREVQQRGFMKSPGETVAVALNTKALAALQATDFSSTTSKANDWSGAGGGVGGPEAELTDQQRLQMEQIDKRDAEF-DQDLDIIGQGIQDLSEIAALQGEEVKRQNVMLESVGKKIDNVNDHLGNVNSRMKETLDEVGRSADKLCVDIMCIALALGFAAVFYRIIK 297          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.250e-26
Identity = 82/253 (32.41%), Postives = 135/253 (53.36%), Query Frame = 1
Query:   79 FAAVKSAIIKRLGDTCDLLAKEPTTKDPKAV-----IEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINN 822
            F   K  I+ RL DT + +     T+   AV     I K   VR+  + L ++W+EL      E +K++SK T EE+  R  ++ D++  +  LK+   A   G +   ++     A       +Q A + G           +++ +Q  R+ QI+   +EM DK + ++ E VE LG +AK +NEEL VQ +M+D+L   V+ A EHV N+N ++ + LK VR +DK C+DI+C+LLL+G++ V+  L  +
Sbjct:   61 FMLTKHRIMVRLADTEERVEDCIRTRTENAVAQDVKIRKQQEVRARFKDLTKDWEELSALLSKETSKKKSKFTAEEIRSRTAIVRDIKDHLDTLKAQFTASYSGVQMDASQTLPSFASLKRSIDQQSASSGGQGAASVVVEQERISSQQNQRLAQIQATDREM-DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVMIQLARS 312          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: K0SY08_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SY08_THAOC)

HSP 1 Score: 114 bits (285), Expect = 3.190e-24
Identity = 88/265 (33.21%), Postives = 141/265 (53.21%), Query Frame = 1
Query:   46 KNKKKNKEDGRFAAVKSAIIKRLGDTCDLLAKEPT--TKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRG------GYGTAMPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYAL 813
            K +K  K+  RF  +KS I+  L +   L+ ++    + +PK  I     +R  +R   + W EL+  Y+ E  K++SK T EELE ++ L++ L+ EI ++K   Q G   ++GG T        G   A+ A++    +    G +    T     LT  QQ ++Q I+DR  E  DK L  + + ++ L E+A    EE+  Q+ M+     R+D A EH+ NVN +MK+ L  V R++DK C+DIMCI++++G  AV Y L
Sbjct:   48 KGRKGQKKGSRFLELKSNIVAGLKNVHSLIEQQSNAVSLNPKDSITAQAEIREVIRQASDEWNELNEIYKKEARKKKSKFTEEELEVQQALVMQLKQEIDKVKDAQQGGY--ARGGATLQNSQLNLGALAALDAADLSSNDPSGGGRAWQSGTGGTA-LTGNQQVQLQAIQDRDAEF-DKDLDEIGDGIQDLHELALRQGEEVRRQNEMLKGTEQRMDQAQEHMTNVNAKMKDTLNEVGRSSDKLCVDIMCIVMMMGFAAVFYQL 308          
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Match: A0A7S2XIT6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIT6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.610e-23
Identity = 93/266 (34.96%), Postives = 145/266 (54.51%), Query Frame = 1
Query:   52 KKKNKEDGRFAAVKSAIIKRLGDTCDLLA----KEPT-----TKDPKAVIEKNNAVRSNLRALEENWKELDGAYQAEKNKRRSKITREELEERRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTSGTSTVQETPPAGK-LTQEQQFRIQQIRDRKKEMEDKYLTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRMKEVLKSV-RAADKFCMDIMCILLLVGMLAVLYALI 816
            KK  K   RF  +KS+I+ RL D   ++A    KE +       + K  I     VR  +R   + WKEL+  Y+ E  K+RSK T +ELE ++ L++ L+ EI + K   Q         G       A  A+E     A TSG     +    G  LT  QQ +IQ +++R  E  D  L  + E ++ L E+A+  +EE+  Q++M+DD+G ++D+ +EHV NVN ++K+ LK V R++DK C+DIMCI+L++G   VL+ ++
Sbjct:   49 KKSQKTGSRFLELKSSIVGRLQDIHGMIADSKQKEKSRVGFQVNEQKETIAAQAKVREEIRQATDEWKELENIYRNEARKKRSKFTPDELEVQQVLVMKLQDEIEKCKEASQGTGRRMDPQGQLNSDNLAFLAAEDIY--APTSGGKGGWKGGTKGAALTGGQQSQIQALQERDAEF-DTQLDDIGEGIQDLAEIAELQSEEVKRQNQMLDDMGIKMDSVHEHVQNVNLKLKDTLKEVGRSSDKLCVDIMCIVLMLGFAGVLFKML 311          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2635.7197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE1.750e-14383.27t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YY22_9STRA2.380e-7149.65Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
B8LD27_THAPS8.230e-3137.16Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
W7UCC1_9STRA3.000e-2834.77Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1BK55_9STRA1.840e-2736.00Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3PYZ1_9STRA1.870e-2733.11Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0BZ32_9STRA2.900e-2732.36Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2RAR9_9STRA3.250e-2632.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0SY08_THAOC3.190e-2433.21t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XIT6_9STRA2.610e-2334.96Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2635contigH-paniculata_contig2635:6054..11277 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score217.6
Seed ortholog evalue3.6e-54
Seed eggNOG ortholog2880.D8LE18
Preferred nameSYP71
KEGG koko:K08506
KEGG Pathwayko04130,map04130
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0003674,GO:0005215,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005911,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006906,GO:0006996,GO:0008104,GO:0008150,GO:0008565,GO:0009506,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0022406,GO:0030054,GO:0031201,GO:0031224,GO:0032991,GO:0033036,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048278,GO:0048284,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055044,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0090174,GO:0098796,GO:0140056
EggNOG free text desc.SNAP receptor activity
EggNOG OGs28JTR@1,2QS7N@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-05_004390.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons7
Model size2098
Cds size414
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929788.5300577-UTR-H-paniculata_contig2635:6053..73231622929788.5300577-UTR-H-paniculata_contig2635:6053..7323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 6054..7323 -
1691481011.0126112-UTR-H-paniculata_contig2635:6053..73231691481011.0126112-UTR-H-paniculata_contig2635:6053..7323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 6054..7323 -
1622929788.6314306-UTR-H-paniculata_contig2635:9757..99011622929788.6314306-UTR-H-paniculata_contig2635:9757..9901Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 9758..9901 -
1691481011.07784-UTR-H-paniculata_contig2635:9757..99011691481011.07784-UTR-H-paniculata_contig2635:9757..9901Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 9758..9901 -
1622929788.6452553-UTR-H-paniculata_contig2635:10546..106871622929788.6452553-UTR-H-paniculata_contig2635:10546..10687Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 10547..10687 -
1691481011.0922015-UTR-H-paniculata_contig2635:10546..106871691481011.0922015-UTR-H-paniculata_contig2635:10546..10687Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 10547..10687 -
1622929788.660616-UTR-H-paniculata_contig2635:11148..112771622929788.660616-UTR-H-paniculata_contig2635:11148..11277Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 11149..11277 -
1691481011.1035042-UTR-H-paniculata_contig2635:11148..112771691481011.1035042-UTR-H-paniculata_contig2635:11148..11277Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2635 11149..11277 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929788.5509112-CDS-H-paniculata_contig2635:7323..74341622929788.5509112-CDS-H-paniculata_contig2635:7323..7434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 7324..7434 -
1691481011.023711-CDS-H-paniculata_contig2635:7323..74341691481011.023711-CDS-H-paniculata_contig2635:7323..7434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 7324..7434 -
1622929788.5637863-CDS-H-paniculata_contig2635:7985..80781622929788.5637863-CDS-H-paniculata_contig2635:7985..8078Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 7986..8078 -
1691481011.0344074-CDS-H-paniculata_contig2635:7985..80781691481011.0344074-CDS-H-paniculata_contig2635:7985..8078Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 7986..8078 -
1622929788.575811-CDS-H-paniculata_contig2635:8458..85541622929788.575811-CDS-H-paniculata_contig2635:8458..8554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 8459..8554 -
1691481011.0430834-CDS-H-paniculata_contig2635:8458..85541691481011.0430834-CDS-H-paniculata_contig2635:8458..8554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 8459..8554 -
1622929788.5881474-CDS-H-paniculata_contig2635:9047..91331622929788.5881474-CDS-H-paniculata_contig2635:9047..9133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 9048..9133 -
1691481011.0530064-CDS-H-paniculata_contig2635:9047..91331691481011.0530064-CDS-H-paniculata_contig2635:9047..9133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 9048..9133 -
1622929788.6029315-CDS-H-paniculata_contig2635:9729..97571622929788.6029315-CDS-H-paniculata_contig2635:9729..9757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 9730..9757 -
1691481011.0619702-CDS-H-paniculata_contig2635:9729..97571691481011.0619702-CDS-H-paniculata_contig2635:9729..9757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2635 9730..9757 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2635.7197.1prot_H-paniculata_contig2635.7197.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2635 7324..9757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2635.7197.1

>prot_H-paniculata_contig2635.7197.1 ID=prot_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MPASEFFKQEARTSGTSTVQETPPAGKLTQEQQFRIQQIRDRKKEMEDKY
LTVVEEHVERLGEMAKNINEELHVQDRMVDDLGNRVDTANEHVVNVNTRM
KEVLKSVRAADKFCMDIMCILLLVGMLAVLYALINNN*
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mRNA from alignment at H-paniculata_contig2635:6054..11277-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2635.7197.1 ID=mRNA_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5224bp|location=Sequence derived from alignment at H-paniculata_contig2635:6054..11277- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGACTGCAGTGGGAGGATCTGATGAGGAGAGGGCACTCCGAAAGAAGAA CAAAAAAAAGAACAAGGAGGATGGACGTTTTGCAGCCGTCAAGTCCGCAA TCATCAAGCGGTTGGGAGACACTTGTGACGTGAGTGTTGTGGAGCATGGA GGGAAGGGAGGGGAAGGAGGCAGAGGGCACTATCATTATACTGTTATAAC ATGATATGACATTGCGTTCTTACATGCTTGCCATGCGAAGCAATTCTGTG TCCTGTTGGCTGTTCGGAGGGATGAGGGATCAACTCAACGACTTTCACCT TGATTGTTGTAAGGCACCCCTGCTGGGATTTTATGTACGCCACATTGGCC CGCAAGATGCACCGTTGAATTGTTTTTTACTTTAGACGGGGCAGTCGGCG CAGCCCTTGTAATTCTGTATCAGACGTAAAAATGCTAACAGACCACGCGT TCGGCACACGGTACTTGCATACCTGTTGCATATAGAAATCCCCGCTTACG TGCGGTTTGCAATCCATCAGCTCGACAAAGCAGTATTGAGGTTAGTGTGG ACTGTCAACCCTCAACCATTGCCGTAATCGTATACTGCAGCTCTTGGCGA AGGAACCCACAACTAAAGACCCGAAGGCCGTGATCGAGAAGAACAACGCA GTGAGGTCCAACCTAAGGGCGTTGGAAGAGAACTGGAAGGAGTTGGACGG GGCCTATCAGGCGGAGAAGAACAAGCGCAGGGTGAGGTGCCGTAGGCAAC CTAGCTTTTTTACCGTTTAACTGTTATTTACAACCATTTGCCGCTTGTTA TGGACAGTACATTGAGCAAATTGGCAAATTGGCACGTGTGCAAGTACATG TTTTCGACATACGTAGGAATTGTAGTTGTATATGACATGATCTCATTGCG GGTTGGTTGGAAGCACCAATGGAGTCAGTGTTTTTGCCAGAGCGCGGCGA TTGATGTCGGTGAATTGCAAACATGCGGAAATACCACGCATGAGGCAGTC CCTTGTCCCTTCCTGTGCCCCCTCAATTATCTATCTTGGGAACGGATGTC CAGTAGTGCTATGGGGATGTGGATTACGACTTTTGTACCCATTATTTTTT TTATGCATGTACTATGCAGTAGTCGATTAAGAATTTTTCGATACGACATG GTCGTGATTGGATGTGACACGTGGTCTTAATAGGCCAAAGCATCGACATA CATGTGAAGGGTCCATTCTCGTAATGGTTCACAAATTATGTTTCGTTGAA TCGGTGGCCCCACGACTTCCACTCGTTTTGTCGCATTGTCTAAAGGGAAT TTGCCGGCCGCATGTATGCTCTGGTGAAATTAATGATGAATGTCGCTCGC GTAATCCGCTCGCACCGTGCCCACAGAGCAAAATCACCCGAGAAGAGCTG GAAGAACGACGGCAGTTGTTGGTGGACCTTAGACACGAGATCGGAGAGCT GAAGAGTATTCACCAAGCAGGGGTTGTGGGATCGAAGGGCGGGGGTACGC GTGGCGGGTACGGGACGGCAATGCCGGCGTCGGAGTTCTTTAAGCAAGGT CAGAGATGGAGATGACGTCTGCATTTGGAAGTGGGTTGTTGTGTACTGCT AGTCATACTAGATGGTCTGTCTCGCAGGGCTTGTACAAAGTATGTAGTCG ATCATCACAAGCAGAAGGTCAAGGTCCGAACAATGAAGTTTGTATTTCTC GAGTCAACATCTTGCCGCATCTTCTGTCTCTCCCCCTTTGTCCACATGCG GCACCAACTTGGTGTCCAATGACGAAGTATGCGTCGCTGTATGGTATCAT GCACAGTAATTGGCATTCATCGTGGTGTTTTATCTTCATATTACAACTAC TATTGATGTGAGACACGATGTTTTATGTCAAGAGGTGAGGCTGCCTCCGT ACCTCGCGCCCGGTAGGCGGTTGATCGAGGGAGTGAACTGCTTCACTTTG TTATTTCGTTGAAAATATTTTTTATACCTGCTGAGCGTGTTGAGCTGGTT CGTTCTGTTCACCACTCACCACACGGTGCTCAGTGAACAACTGTGTGCTT ACCATGACTGGGTTGTAATTCTTCGATAGTCGTCGAAGGGTTTCAGTATT GGGTATGTACTGGTTCTTTGTCCCTGACGTCACGTCTCGTGCAGAGGCAC GAACGAGTGGAACGTCGACGGTGCAAGAGACTCCTCCAGCTGGGAAACTT ACGCAGGAACAGCAGTTCCGCATACAACAGGTACATACATCATTGTCTCC CGTCAGAGCTTTTATTTATTTCTGGAGTGGGGCAAATAGGAGTGAAGACT GGAGTGACGTCAATTCTATGGACACTGCAGAAGACTACCTTTCAATATCA TTTTTCAGCTTAGGCCCGGTGATGAGGAATGACCCCGAAATATTCTGACG CTCACCTTTTGTTATTTCACAAGACACCCACCTTGAGAAATGGGGCTCAA ATTGTGGCTCCATATTAATTCCTATTTCAAACTAAGAAACACTAATATTG CTCATGATTCTTGCCAAGATGAGCCCGTGCTGTATAAGAATCCGATTTTG CCTTTTTGGTATTTGTATTTGTGATTTTGAGCGTGATCATGTAGGGAACT GAAGAGTTGAGTGGGGCACAAGCCCTCGAGGCGTTTCAGCAGAATGCTTT GTTCATATCTACTGGCTGCTCTGTGAACACGACGGCCCCTCCGTGTGTGT TGTGTGTGTTGGGGTCCATCTAGATTCGCGATCGTAAAAAGGAGATGGAG GACAAATATCTCACCGTTGTTGAGGAACACGTGGAGAGGCTAGGGGAAAT GGCGAAGAATATAAACGAGGTGAGTCTAGAGGGGTGTAGACCTGATGTAG TGAACATGTTGGCAATGAACAAAGTTTTGCGCGGAGAATAGCTGTCGTCC CGCTGCTCGAGGTTTGGCAGTCTTTATCAGGAGAGTGGATGTCTGTGTGT GCCTCTAATCTTGCGGTCGGTCAACCTTTAACCTTGCCAATCATGCTGAG CATGCAACGTGAACTACAATGAACCATGGACGAGCACATTGGCAGTGGAA TTCCATATGTGGCCATATGACAGCGCGGTACCGCGTGTAGGCTAACGAGC GCTTGGCTGTTGAGGATATTTGAAAGCTCGCGTTATCGCAACGTGGCGCT ACCGTTTTCCCTGTGGTGAACCTCACGTACTACCCAACTACCCCACTAGG AGCTCCATGTCCAAGACCGTATGGTGGACGACCTCGGCAACCGCGTCGAT ACTGCGAACGAGCACGTTGTAAACGTCAACACACGGATGAAAGTAAGCCA TGAGGAAAAGGCAAATACGGTGTTCTGACACGCGGGAGTATTTTGGTGTC CTAATGTAAATGCAAAAGCCTCAAGTCGTGTGTTGCAAACGCTGCAGTAG GATCTGTTGGAATGAAATGAAGAAAAAATGCAGCCCAGCAGACGATTCAT CGCTGCCATTGTGTGTTTTGATCCACGTTACACCCATCCAATATAGCATA GAGACTGACCCTGCTTTGCAGGTGTCTCGTCCGCTACTCGTATGCCTTTA TTTCTACGCCATTTGTGTGATTATTAGCCGTAGTTGTGGTTACTCCCGTG CAGTCTGGTAATGCAAGATGATTCGTTCACGGGCATCCCGTGGCACGCGG AAAAAATCATGGCACTCGCAAGTGGTTTGTGCGCTAACATGGGATGGGGT CACTTGCACGAATTGGTTAAAACTCGTTCAAATTAAGCGTCGTAATCACA AAGAATCGTGTTCATTCTGTACAGTGATTTGATCGCGGTAAAAAAGAGCA ATGTTTTTTCCCTTGTGATGCTTTTGTTGGGTGGGGTACGCAGGAAGTGC TCAAGAGCGTCCGTGCCGCAGACAAGTTCTGCATGGACATCATGTGCATC CTCCTGCTTGTAGGCATGCTCGCGGTTCTCTATGCGCTTATCAACAACAA CTGATGCAGGTGCTCGCTACTGCATGCCCTGCAGTACGTCTAGCACTGTA GGGTCGGGTGGTGTCGTATCGTACGGGGGAAAAACTCCTTAGCCTGCAGG CACTTTTATCATCAGCTGTAGCTGGGATCATCAAATTACTTTTCAGGGTG TGCCGGTCAGCACGGGGAGATGCGCGTTTTTGTCTTGTAGGGCAGTTAAC GGAGTCAGACTTGTTGGTATCCGTCGACAATGCACAGCTTTAGAGGTATA TCTGTCGATAACGTCTACTGCTTCGTAGCCGCTCACAAATTGTTGGGCTT CTCCTGCGTTTTTCTCCTTTTCTGCGTTACTCGTACGTGTTATGCGAATT GTTTTAATGGATCTTCCTGTTTGTTTTACTTTTTGTGTGTCATGTGCAAA AAGACGACTGTACCAATATGTATGACGCGTGGGTTCGCCAAAAGGAGGTG TACGATATATCCGATATCGGGCGTGTGTCATTGAAGGTTGCATTGTGGTG TGGACCCCACGAGGGTTGAAGGAATAACTGTGCGACTAAATAGCGCCGAT GGATTTGGCGAATAGGGCCGTCGCATGTGGCAGGAATGAAGGCGGTATCT TCATCCTTCTCTTGTGAGAAATCCCTTGCTGAATTATTCGAGTGTCCATA ATTTTATTCTTTTCCACCCTTTTGGGGGTGGGGATGTGGACCGTGAGAGG AAGAAGGTTATGTACAAGTGCTCGCTGTCGCCGCAGGCACCGTTGATATT TTTGGTATCTTGATATAGTATCTGTGTTGGGTCGATCTGTATTTAGCTCC TGTGATCACCATCGTTTTCCTCGCGGGGTGTTGAATGTGTTGTGTTGTGC CGTTTTTTCCCCTTTTTTTTCGCTCTTCCGTTCCTCGTAGACCGCCCACA AGTTTTGCATGCTGTTTTGCTGTGTTGCTGGTGAGAGCTGCAGTAGGCGA GAAGATTTTTTGTTTGGTTGGCTGTCGTTTTTTGGGTCCCGCCGTGAATT CATAATTATGACAGCTTTACATTAATTGCACCATATGCCGGAGAATATGT ACTGTACGAGGCCATCTCCTCTCGGCCTGCAGAGACCGTGCGTAGGCTCG TTCGTGTTGTTGACCCGATGGGACGCACACCTCGAAAATCTGTTTTCTGG GATCTGCTTTTTCGCCATCTTTTCCATGCAAATAGGCGTAAACGTGCTGA AAAATAGCGGTAGAGGCGATTGTACGTTCGAGGCGGTCATATGCTGCCCT GTCTAAGAAGAGCACTGTTTGACG
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Coding sequence (CDS) from alignment at H-paniculata_contig2635:6054..11277-

>mRNA_H-paniculata_contig2635.7197.1 ID=mRNA_H-paniculata_contig2635.7197.1|Name=mRNA_H-paniculata_contig2635.7197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig2635:6054..11277- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGGCGTCGGAGTTCTTTAAGCAAGATGCCGGCGTCGGAGTTCTTTA
AGCAAGAGGCACGAACGAGTGGAACGTCGACGGTGCAAGAGACTCCTCCA
GCTGGGAAACTTACGCAGGAACAGCAGTTCCGCATACAACAGAGGCACGA
ACGAGTGGAACGTCGACGGTGCAAGAGACTCCTCCAGCTGGGAAACTTAC
GCAGGAACAGCAGTTCCGCATACAACAGATTCGCGATCGTAAAAAGGAGA
TGGAGGACAAATATCTCACCGTTGTTGAGGAACACGTGGAGAGGCTAGGG
GAAATGGCGAAGAATATAAACGAGATTCGCGATCGTAAAAAGGAGATGGA
GGACAAATATCTCACCGTTGTTGAGGAACACGTGGAGAGGCTAGGGGAAA
TGGCGAAGAATATAAACGAGGAGCTCCATGTCCAAGACCGTATGGTGGAC
GACCTCGGCAACCGCGTCGATACTGCGAACGAGCACGTTGTAAACGTCAA
CACACGGATGAAAGAGCTCCATGTCCAAGACCGTATGGTGGACGACCTCG
GCAACCGCGTCGATACTGCGAACGAGCACGTTGTAAACGTCAACACACGG
ATGAAAGAAGTGCTCAAGAGCGTCCGTGCCGCAGACAAGTTCTGCATGGA
CATCATGTGCATCCTCCTGCTTGTAGGCATGCTCGCGGTTCTCTATGCGC
TTATCAACAACAACTGAGAAGTGCTCAAGAGCGTCCGTGCCGCAGACAAG
TTCTGCATGGACATCATGTGCATCCTCCTGCTTGTAGGCATGCTCGCGGT
TCTCTATGCGCTTATCAACAACAACTGA
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