mRNA_H-paniculata_contig26323.7190.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A836CIQ1_9STRA (4-aminobutyrate aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIQ1_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.060e-38 Identity = 84/152 (55.26%), Postives = 102/152 (67.11%), Query Frame = 1
Query: 28 APLPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEVCG 483
A L QPA SMGGTY N +SCA+A ATL V++EEGL+ NA+ RG QL GL ++ K G+ +D+RG GLMVGLE A GSG AT ++KACL+RGMILLT ST+ETVRFIP LN+S EM EGL IF +A+ EV G
Sbjct: 316 AELSATQPAGSMGGTYAGNIISCAAACATLDVIQEEGLVANAKARGDQLSSGLKDIA------AKLQSLNGGKAI-VRDVRGPGLMVGLELTAAPGSGAATRLSKACLKRGMILLTTSTFETVRFIPALNISAKEMDEGLGIFSDAMHEVFG 460
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A484E2I7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2I7_BRELC) HSP 1 Score: 131 bits (329), Expect = 2.490e-33 Identity = 75/149 (50.34%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGS-GVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEV 477
L + QP SMGGTY N VSCA+AIATL V+ EE LL N + RGKQL GL K+ G ++P D+RG GLM+GLEF+ + S G AT ++ ACL GM+LLT S YET+RFIPPL VSE E L F++A+ +V
Sbjct: 282 LTDTQPPGSMGGTYAGNTVSCAAAIATLEVIAEENLLENTRARGKQLQAGLHKLKASG-------------KYPILDVRGLGLMIGLEFDPAKASKGTATKISAACLNHGMMLLTTSIYETLRFIPPLTVSEDECSLALATFEKALNDV 417
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A1W0A2U5_9STRA (4-aminobutyrate aminotransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2U5_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.040e-32 Identity = 72/147 (48.98%), Postives = 91/147 (61.90%), Query Frame = 1
Query: 46 QPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEVCGE 486
QPA SMGGTY NAV+ A+A A L V +EE +L N + RG+QLM GL L ++P D+RG GLMV LEF++ G + V C+ +GM+LL+ S YET+RFIPPLNVS EMQEGL I A+A+V GE
Sbjct: 286 QPAGSMGGTYAGNAVAMAAASAVLDVFQEESILANTRARGEQLMTGL---------------NNLKNKYPILDVRGAGLMVALEFDSTVAPGTSGKVCATCVDKGMLLLSTSVYETLRFIPPLNVSAEEMQEGLDILDAALADVFGE 417
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A0P1AB24_PLAHL (4-aminobutyrate transaminase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB24_PLAHL) HSP 1 Score: 128 bits (322), Expect = 2.660e-32 Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFE-APQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEV 477
L +LQP SMGGTY NAV+CA+AIAT +V+ +E LL N RG QL GL ++ G ++P D+RG GLM+GLEF+ + + G A+ V+ ACL RGM+LLT S YET+RF+PPLNVSE E L+IF++A+ +V
Sbjct: 282 LTDLQPPGSMGGTYAGNAVACAAAIATQQVIADEKLLENTHVRGAQLQTGLKQLKASG-------------KYPILDVRGLGLMIGLEFDPSSRIKGAASKVSAACLNRGMMLLTTSVYETLRFMPPLNVSEDECNLALEIFEKALNDV 417
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A7S3WLW3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WLW3_EMIHU) HSP 1 Score: 122 bits (307), Expect = 8.800e-32 Identity = 71/148 (47.97%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEV 477
L + QP SMGGTY NAVSCA+A+AT RV++EEGL+ NA +G +L L GE R G +D+RG G M+GLE A Q +G A V +AC RG++LL CS YET+RFIPPL V+ E+ E +F A+AEV
Sbjct: 89 LTDAQPPGSMGGTYAGNAVSCAAAVATQRVIREEGLVENAAAQGARLRAAL---------GEVAARRGEG---VVRDVRGHGCMLGLELAASQPAGTAKRVAQACAARGLLLLNCSVYETLRFIPPLTVAPAEVDEACDVFDAALAEV 224
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: W4H0V2_9STRA (4-aminobutyrate transaminase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0V2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.050e-31 Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEV 477
L +LQP SMGGTY NAVSCA+A+ATL +EE L+NA RG QL+ GL K+ ++L FP D+RG GLMV +EF+ G + + +AC+ GM+LL S +ETVRFIPPLNVSE E+ G+ IF +A+++V
Sbjct: 284 LTDLQPPGSMGGTYAGNAVSCAAALATLDAFEEENTLINASVRGAQLVAGLTKL------------QDL---FPILDVRGVGLMVAVEFDKSVPPGTVSRICQACVEYGMLLLPTSVFETVRFIPPLNVSEGEIDLGIAIFAKAMSQV 416
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A6G0X0A5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0A5_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.410e-31 Identity = 67/150 (44.67%), Postives = 93/150 (62.00%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEVCG 483
L + QP SMGGTY NAV+CA+A+ATL V +EE +L N + RG QL+ GL K+ ++P D+RG GL+V +EF+ A+ + +AC+ RGM+LLT S +ET+RFIPPLN S E+ G+ IF +AV +V G
Sbjct: 282 LTDKQPPGSMGGTYAGNAVACAAAMATLEVFEEEKILENTRLRGAQLVSGLAKLK---------------EKYPILDVRGTGLLVAVEFDKTVPKDTASRIAQACVNRGMLLLTTSVFETLRFIPPLNSSADEIDLGVSIFSQAVEDVLG 416
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A662WC34_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662WC34_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.820e-31 Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFE-APQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAVAEV 477
L +LQPA SMGGTY NAV+CA+AIAT V+ EE +L N + RG QL GL K+ G ++P D+RG GLM+GLEF+ A G A V ACL GM+LLT S YET+RF+P L VSE E L+IF++A+ ++
Sbjct: 282 LTDLQPAGSMGGTYAGNAVACAAAIATQEVIAEENVLENTRARGAQLQAGLAKLKASG-------------KYPIMDVRGLGLMIGLEFDPAHTPKGTANKVATACLDHGMMLLTTSIYETLRFMPALTVSEDECSLALEIFEKALDDI 417
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: F0WIK1_9STRA (Uncharacterized protein ALNC14_072280 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WIK1_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.750e-31 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFEAPQGS-GVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAV 468
L ++Q SMGGTY NAVSCA+AIAT VMK + +L NA+ RG QLM GL K+ + G ++P KD+RG GLMV +EF+ + G A+ V++ACL+ G++LLT S YET+RF+PPL +S E Q GL+ F++A+
Sbjct: 341 LTDMQHPGSMGGTYAGNAVSCAAAIATQSVMKRDNVLANARERGLQLMTGLRKLQYCG-------------KYPIKDVRGLGLMVAVEFDDTIAAPGTASRVSQACLKNGLLLLTTSIYETLRFMPPLTLSADECQLGLKKFEDAL 473
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Match: A0A8K1FHT3_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHT3_PYTOL) HSP 1 Score: 122 bits (305), Expect = 7.590e-30 Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 34 LPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNAQRRGKQLMDGLVKMSWGGAGGEKGNDRELGRRFPFKDLRGQGLMVGLEFE---APQGSGVATAVTKACLRRGMILLTCSTYETVRFIPPLNVSETEMQEGLQIFKEAV 468
L + QP S+GGTY NAVSCA+A+ATL V++EE +L N +RG + M GL K+ G R+P +D+RG GLMV LEF+ AP G+ A V++ACL+ GM++LT ST+ET+RF+PPL +S E + GL++ + A+
Sbjct: 282 LSDSQPPGSVGGTYAGNAVSCAAALATLDVIEEENVLANVNKRGAEFMAGLQKLKASG-------------RYPIQDVRGLGLMVALEFDLKLAPVGT--AARVSEACLKHGMMVLTTSTFETLRFMPPLTISADETRLGLELLERAL 414 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26323.7190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26323.7190.1 >prot_H-paniculata_contig26323.7190.1 ID=prot_H-paniculata_contig26323.7190.1|Name=mRNA_H-paniculata_contig26323.7190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=167bp MPPFCGPSFAPLPNLQPAASMGGTYVANAVSCASAIATLRVMKEEGLLLNback to top mRNA from alignment at H-paniculata_contig26323:650..1150+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26323.7190.1 ID=mRNA_H-paniculata_contig26323.7190.1|Name=mRNA_H-paniculata_contig26323.7190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=501bp|location=Sequence derived from alignment at H-paniculata_contig26323:650..1150+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26323:650..1150+ >mRNA_H-paniculata_contig26323.7190.1 ID=mRNA_H-paniculata_contig26323.7190.1|Name=mRNA_H-paniculata_contig26323.7190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at H-paniculata_contig26323:650..1150+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |