mRNA_H-paniculata_contig26249.7169.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A7S3MSA0_9CILI (Hypothetical protein (Fragment) n=1 Tax=Anophryoides haemophila TaxID=46462 RepID=A0A7S3MSA0_9CILI) HSP 1 Score: 64.7 bits (156), Expect = 9.570e-12 Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQ-LPSQFCAK----SSSLRYIFVPHLPNVTGLICRVPSTEFS 210
L +QHRAGVSPYTSSY+ A CVF KQ P CA ++ + P P VTG CRVPS F+
Sbjct: 10 LTFQHRAGVSPYTSSYDFARTCVFGKQSFPPGLCAPHRHHTARVHDSSGPPYPKVTGAFCRVPSPRFT 77
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A1Y1JUJ1_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1JUJ1_PHOPY) HSP 1 Score: 64.3 bits (155), Expect = 1.550e-11 Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 1 LMQKHQSLPYQHRAGVSPYTSSYELAEACVFNKQLP-----SQFCAKSSSLRYIFVPHLPNVTGLICRVPSTEFS 210
L + H L +QHRAG++PYTS++ AE CVFNKQL +F + +L P VT L C VPS EFS
Sbjct: 13 LFRLHHQLTFQHRAGITPYTSTFVFAECCVFNKQLQPAGIFDRFNLQGQALTIYAGAPSPEVTVLFCLVPSPEFS 87
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A0N4VQR9_ENTVE (Uncharacterized protein n=2 Tax=Ecdysozoa TaxID=1206794 RepID=A0A0N4VQR9_ENTVE) HSP 1 Score: 64.7 bits (156), Expect = 1.960e-11 Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQ-LPSQFCAK----SSSLRYIFVPHLPNVTGLICRVPSTEFS 210
L +QHRAGVSPYTSSY+ A CVF KQ P CA ++ + P P VTG CRVPS F+
Sbjct: 24 LTFQHRAGVSPYTSSYDFARTCVFGKQSFPPGLCAPHRHHTARVHDSSGPPYPKVTGAFCRVPSPRFT 91
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A0P6BEK3_9CRUS (Uncharacterized protein n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6BEK3_9CRUS) HSP 1 Score: 59.3 bits (142), Expect = 1.870e-9 Identity = 31/56 (55.36%), Postives = 33/56 (58.93%), Query Frame = 1
Query: 28 YQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSSSLRYIFVPHLPNVTGLICRVP 195
+QHRAGVSPYTS + AE CVF KQ P SS P P VTGL CRVP
Sbjct: 85 FQHRAGVSPYTSPFGFAETCVFGKQSPGPLHCGSSPFIERSTPS-PEVTGLCCRVP 139
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A0J8BG93_BETVV (Uncharacterized protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BG93_BETVV) HSP 1 Score: 58.5 bits (140), Expect = 2.520e-9 Identity = 30/59 (50.85%), Postives = 34/59 (57.63%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSSSLRYIFVPHLPNVTGLICRVPS 198
L ++HRAGV PYTSSY+ AE CVF KQLP P P VT + CRVPS
Sbjct: 61 LTFRHRAGVRPYTSSYDFAEPCVFVKQLPPPGLCPQCLACVSTGPPYPEVTEVNCRVPS 119
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: C9YEE8_CURXX (Uncharacterized protein n=1 Tax=Curvibacter symbiont subsp. Hydra magnipapillata TaxID=667019 RepID=C9YEE8_CURXX) HSP 1 Score: 54.3 bits (129), Expect = 2.180e-7 Identity = 34/68 (50.00%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQL-PSQFCAKSSSLRYIFVPHL----PNVTGLICRVPSTEFS 210
L +QHRAGV+PYTS++ AE CVFNKQ P FC P VT ICRVPS EFS
Sbjct: 86 LIFQHRAGVTPYTSTFVFAECCVFNKQSQPPIFCNLIGLHPRGTSPTKGTPSSEVTVSICRVPSPEFS 153
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A7VSA7_9FIRM (Uncharacterized protein n=1 Tax=[Clostridium] leptum DSM 753 TaxID=428125 RepID=A7VSA7_9FIRM) HSP 1 Score: 52.8 bits (125), Expect = 6.410e-7 Identity = 31/65 (47.69%), Postives = 36/65 (55.38%), Query Frame = 1
Query: 4 MQKHQSLPYQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSSSLRYIFVPHLPNVTGLICRVPS 198
M H L +QHRAGVSPYTSS++LAE CVF KQ P S S +F P L + PS
Sbjct: 40 MLAHLLLTFQHRAGVSPYTSSFDLAETCVFAKQSPGPIHCGSISGASLF-PKLRDQFAEFLNYPS 103
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: E0XY91_9SPIR (Uncharacterized protein n=1 Tax=uncultured Spirochaetales bacterium HF0500_06B09 TaxID=710994 RepID=E0XY91_9SPIR) HSP 1 Score: 52.4 bits (124), Expect = 1.260e-6 Identity = 24/37 (64.86%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSS 132
L +QHRAGVSPYTS Y LAE CVF KQ P F S
Sbjct: 46 LTFQHRAGVSPYTSRYRLAETCVFGKQSPGPFLCNLS 82
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A1V5J5Q1_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium ADurb.BinA012 TaxID=1852815 RepID=A0A1V5J5Q1_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 4.890e-6 Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSSSLRYIFVPHLPNVTG 177
L +QHRAGVSPYTSS++LAE CVF KQ F S+ P LP + G
Sbjct: 80 LTFQHRAGVSPYTSSFDLAETCVFAKQSLGPFLCGHLSV----APLLPKLRG 127
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Match: A0A078KVC2_9FIRM (Uncharacterized protein n=1 Tax=[Clostridium] cellulosi TaxID=29343 RepID=A0A078KVC2_9FIRM) HSP 1 Score: 50.1 bits (118), Expect = 9.340e-6 Identity = 27/60 (45.00%), Postives = 33/60 (55.00%), Query Frame = 1
Query: 22 LPYQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSSSLRYIFVPHLPNVTGLICRVPST 201
L ++HRAGVSPYTSS++LAE CVF KQ P S P P G +PS+
Sbjct: 46 LTFRHRAGVSPYTSSFDLAETCVFAKQSPGPILCGSG------FPEHPFSLGYGVNLPSS 99 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26249.7169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26249.7169.1 >prot_H-paniculata_contig26249.7169.1 ID=prot_H-paniculata_contig26249.7169.1|Name=mRNA_H-paniculata_contig26249.7169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp MQKHQSLPYQHRAGVSPYTSSYELAEACVFNKQLPSQFCAKSSSLRYIFVback to top mRNA from alignment at H-paniculata_contig26249:584..796- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26249.7169.1 ID=mRNA_H-paniculata_contig26249.7169.1|Name=mRNA_H-paniculata_contig26249.7169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=213bp|location=Sequence derived from alignment at H-paniculata_contig26249:584..796- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26249:584..796- >mRNA_H-paniculata_contig26249.7169.1 ID=mRNA_H-paniculata_contig26249.7169.1|Name=mRNA_H-paniculata_contig26249.7169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at H-paniculata_contig26249:584..796- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |