prot_H-paniculata_contig26200.7158.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26200.7158.1
Unique Nameprot_H-paniculata_contig26200.7158.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length420
Homology
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.500e-26
Identity = 73/169 (43.20%), Postives = 92/169 (54.44%), Query Frame = 0
Query:   19 NPTIELGLRR--CLEAFAVVLNELCDAQGCHMSTVNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRGVSICKTRGSEQYCVMRVPPLRARSVTWEVPSELWARDSVLL-VHVQKLVFGCTFDSRMLDYVVWPRGIKKVSFGDADGSGFNGSLDEVEWPASLLEVNLGH 184
            +P+  LG  R  CL+   V LNE CD +  + ST  LQLASL LC+ CR   TLH+ V   TPR L   +   +   ++ C  RVP LRAR  TW VP+    R S+   + V  L FG  F    LD +VWPR +K + F  +  S  N  LD V WPASL +V LGH
Sbjct:  124 SPSCTLGPTRSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGS-LDAIVWPRRLKTIEFRQS--SPLNRLLDGVSWPASLRKVCLGH 289          
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 8.840e-20
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   29 CLEAFAVVLNELCDAQGCHMSTVNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRGVSICKTRGSEQYCVMRVPPLRARSVTWEVPSELWARDSVL-LVHVQKLVFGCTFDSRMLDYVVWPRGIKKVSFGDADGSGFNGSLDEVEWPASLLEVNLG 183
            CLEA  V LNE CD +  + ST  LQLASL  C+ CR+  T+H+ V E  PR L   +       ++ C  RVP LR+R VTW +P+    R  +  +  ++ L FG  F    L+ V WP  ++ + F     S F+ +++ V+WP  L  V  G
Sbjct:   51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDS-LEAVPWPEHLRTMEFHH--DSPFDQTIELVQWPPFLQNVTFG 203          
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 8.340e-19
Identity = 59/153 (38.56%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   12 NVGESAANPTIELGLRRCLEAFAVVLNELCDAQGCHMSTVNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRG----VSICKTRG---SEQYCVMRVPPLRARSVTWEVPSELWARDSVLLVHVQKLVFGCTFDSRMLDYVVWPRGIKKVSFG 157
            N   SA       G  RCL+AF V LN+ CD  G ++ST  LQL+SLP CV CRS+ T+H++V   TP  L       +  + +G   S++    RVP LRAR VTW++  E      V L  V+  V G   +  M D  VW  G++ +S G
Sbjct:   13 NPANSARTVFSIAGPSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSM-DEAVWSDGMRSLSLG 164          
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.530e-17
Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 0
Query:   29 CLEAFAVVLNELCDAQGCHMSTVNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRGVSICKTRGSEQYCVMRVPPLRARSVTWEVPSELWARDSVL-LVHVQKLVFGCTFDSRMLDYVVWPRGIKKVSFGDADGSGFNGSLDEVEWPASLLEV 180
            CL A  V L E  D +  + ST  LQLASL  C+ CR+  TLH+ V    PR L   +    +  ++    RVP LRAR VTW +P+    R  +  L+ +  L FG  F+   L+ V WPR ++ ++F +   S FN  +D V+WPASL  +
Sbjct:   36 CLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGS-LEAVTWPRRLESIAFHNF--SPFNTPIDLVKWPASLKRL 185          
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.350e-17
Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = 0
Query:   29 CLEAFAVVLNELCDAQGCHMSTVNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRGVSICKTRGSEQYCVMRVPPLRARSVTWEVPSELWARDSVL-LVHVQKLVFGCTFDSRMLDYVVWPRGIKKVSFGDA-------DGSGFNGSLDEVEWPASLLEVNLG 183
            CL A  V LNE  D +  + ST   QLASL  C+ CR+  TL ++V   TPR L   +       ++ C  RVP LRAR VTW++P+    R+S+  ++    L F   F+   L+ V WPR +K V            D S F+  +  V WP +L ++  G
Sbjct:   12 CLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDS-LEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTFG 173          
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.960e-10
Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = 0
Query:   31 EAFAVVLNELCDAQGCHMSTVNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRGVSICKTRGSEQYCV--MRVPPLRARSVTWEVPSELWARDSVLLVHVQKLVFGCTFDSRMLDYVVWPRGIKKV 154
            +A  + LN++    G + S + LQLASL LC+ CR + T H+ V  D    L   S  +   S    +   RVP LR R VTW + +            V  LVFG +FD R+ D V WP G+KK+
Sbjct:   17 DALDIALNQVSGVNGWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRV-DRVTWPPGLKKL 141          
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Match: D8LRD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD1_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 6.000e-8
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 0
Query:   51 VNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRG-VSICKTRGSEQYCVMRVPPLRARSVTWEVPSELWARDSVLLVHVQKLVFGCTFDSRMLDYVV---WPRGIKKVSFGDADGSGFNGSLD 169
            + LQLASL LC+ CRS+  LHVRV   TP  L       +TR ++Q  V RVP ++AR VTW++ S+        L  V   +FG    ++ +D V    WP  I+ + F D    GFN  L+
Sbjct:    1 MQLQLASLQLCISCRSVPRLHVRVDRSTPTPLWARPPERETRRAKQRRVGRVPVVQARVVTWKLSSQRLGLSGESLASVPCFIFG----NQGIDQVGGMRWPPAIQTLMFAD----GFNSPLE 115          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26200.7158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE2.500e-2643.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF9_9PHAE8.840e-2036.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFC0_9PHAE8.340e-1938.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZZ4_9PHAE2.530e-1737.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE3.350e-1734.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMU8_9PHAE2.960e-1036.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRD1_ECTSI6.000e-838.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 166..398
e-value: 6.1E-9
score: 36.7
IPR008615FNIPPFAMPF05725FNIPcoord: 252..294
e-value: 8.7E-8
score: 32.2
coord: 318..354
e-value: 5.3E-6
score: 26.5
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 147..356
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 147..356
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 122..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26200contigH-paniculata_contig26200:1382..3297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26200.7158.1mRNA_H-paniculata_contig26200.7158.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26200 1333..3502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26200.7158.1 ID=prot_H-paniculata_contig26200.7158.1|Name=mRNA_H-paniculata_contig26200.7158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
MSIDAKLTNDSNVGESAANPTIELGLRRCLEAFAVVLNELCDAQGCHMST
VNLQLASLPLCVLCRSLATLHVRVAEDTPRNLRGVSICKTRGSEQYCVMR
VPPLRARSVTWEVPSELWARDSVLLVHVQKLVFGCTFDSRMLDYVVWPRG
IKKVSFGDADGSGFNGSLDEVEWPASLLEVNLGHSFNRPIDSILWPALLR
HLSFGHKFNQSIDNTRWPVGLLELTLGINFNQSIVGVCWPPCLQHLTFGH
HFDQPVNGVAWPSSLQKLEFGYNFNQSILSVIWPASLQNLSFGTKFNRPV
KGVLWPSSLRRLEFGTAFNQSLGQVVWPNCLQALTLGEQFNQPLQNIALP
DSLQDFRVLADSRRYSYGLFGVDWPSQLKKLTVPDVYGSECATQLQDAGV
ETNLFRTSLGRRVAVSHPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP