prot_H-paniculata_contig2605.7110.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2605.7110.1
Unique Nameprot_H-paniculata_contig2605.7110.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length344
Homology
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BLAST of mRNA_H-paniculata_contig2605.7110.1 vs. uniprot
Match: D8LAV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV4_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.690e-22
Identity = 92/218 (42.20%), Postives = 111/218 (50.92%), Query Frame = 0 
Query:   87 DPFARSNRVAHTPTGLLSSNPSSCAVPESIAIAPPTAEAEAAAAVASGGEDNGHSGTCTNVSATEAMTMLDDSPGVEESPEITACKETVTVDGGQSAVAVVAQDPFASRSKLPRTPVEASSEVVEGPSTTDDERQDSDPTALGACERVDVGATGEGLAGAGPRTLLEAQLEIGELHLEVACMADRLAKQSDERNRLAEVAFKAQDEAASLRQKLEQHQ 304
            DPF RS ++A TPT      P+  AVP  +A A   AE  AA   A+ G    H          +A  +    PG E  PE       V V+G +S  A    DPFASRS +PRTP +  +   E       ER           ER D G  GEG          EA+L IGELH E+ACM DRL KQ++ERNRLA+VAF+AQDEA  LRQ+LEQ Q
Sbjct:  633 DPFVRSQKIARTPTR----GPAVGAVPRGVAPATDVAETAAADETAAAGVTTTHGAVAHGTQDGDADAV----PGTEIRPE--EATPEVGVEGERSPEAP-GGDPFASRSNIPRTPTDQVAPPRESFVQEGGER----------VERGDAGPMGEG----------EARLRIGELHQELACMTDRLTKQAEERNRLADVAFEAQDEAIKLRQQLEQFQ 819
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BLAST of mRNA_H-paniculata_contig2605.7110.1 vs. uniprot
Match: A0A6H5JU15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU15_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.080e-19
Identity = 85/218 (38.99%), Postives = 106/218 (48.62%), Query Frame = 0 
Query:   87 DPFARSNRVAHTPTGLLSSNPSSCAVPESIAIAPPTAEAEAAAAVASGGEDNGHSGTCTNVSATEAMTMLDDSPGVEESPEITACKETVTVDGGQSAVAVVAQDPFASRSKLPRTPVEASSEVVEGPSTTDDERQDSDPTALGACERVDVGATGEGLAGAGPRTLLEAQLEIGELHLEVACMADRLAKQSDERNRLAEVAFKAQDEAASLRQKLEQHQ 304
            DPF RS ++A TPT      P+  AVP  +A A   AE       A+ G    H     +    ++  +    PG E   E    +  V  +G   A A    DPFASRS +PRTP             TD      +  A    ER D G  GE           EA+L IGELH E+ACMADRL KQ++ERNRLA+VAF+AQDE   LRQ+LE+ Q
Sbjct:  617 DPFVRSQKIARTPTR----GPAVGAVPRGVAPATDVAEKAVVDETAASGVTATHGVVVGDTQDGDSDAV----PGTERRTEEATPEVGVEGEGSPEAPA---GDPFASRSNIPRTP-------------TDQVAPPRESLAQERGERGDAGPMGEE----------EARLRIGELHQELACMADRLTKQAEERNRLADVAFEAQDEVIKLRQQLEEFQ 800
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2605.7110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAV4_ECTSI1.690e-2242.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU15_9PHAE6.080e-1938.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2605contigH-paniculata_contig2605:1710..3379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2605.7110.1mRNA_H-paniculata_contig2605.7110.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2605 1710..3379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2605.7110.1 ID=prot_H-paniculata_contig2605.7110.1|Name=mRNA_H-paniculata_contig2605.7110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
ERVSVGVAATASDGDDGDARAGEEGDEDNESDMHVGVAETQPLSARVADI
GQDTGGTCVTTSASAASSSSSDSPAEGEEGKELGPEDPFARSNRVAHTPT
GLLSSNPSSCAVPESIAIAPPTAEAEAAAAVASGGEDNGHSGTCTNVSAT
EAMTMLDDSPGVEESPEITACKETVTVDGGQSAVAVVAQDPFASRSKLPR
TPVEASSEVVEGPSTTDDERQDSDPTALGACERVDVGATGEGLAGAGPRT
LLEAQLEIGELHLEVACMADRLAKQSDERNRLAEVAFKAQDEAASLRQKL
EQHQRQSNVDTSTSGRDEQQIENIDGHGTPMARGDGGGEGDGAA
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