prot_H-paniculata_contig2597.7084.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2597.7084.1
Unique Name	prot_H-paniculata_contig2597.7084.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	334

Homology

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: D7FX24_ECTSI (Rab8C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 1.820e-137
Identity = 231/314 (73.57%), Postives = 259/314 (82.48%), Query Frame = 0

Query:    6 RRKRTS--GINREM--------GLGTAAGRFGRGARRRAGPGNGRGGLSRKTLNIVTNLESHTVGVRSKQELEEVEEEKRLAXXXXXXXXSLRQKGDDFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQKRVDDERRGTRVF--GSGRLRS-LANRKTSFNLSRRTLGV 306
            RRKRTS  GINRE         G G   GRFG G RRR+GPGNGRGGLS+KTLNIVTNL+SHT  VRS++E+E++E      XXXXXXX +LRQKGDDFD TIRILLLGDSGVGKTSLM RFSEDKFAPT+ISTAGVD+KVQTLDI GKR+RCQIWDTAGQE+FHVITR YYRGAHGIALAYDVTD+DSFKNVNYWMANIQTH++P  R+QKMILGNKVDI+   RAIS+KDG DVAKEFGV FFEVSAK+G+GVSDAFYSLAVDIV    A+ KR  D+RRG R+F  G+ RLRS  A++KTSF   R+  GV
Sbjct:   37 RRKRTSTSGINRERQFDGTVTGGTGGTGGRFG-GGRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEXXXXXXXXXXXXXENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIE--DRAISTKDGQDVAKEFGVRFFEVSAKNGYGVSDAFYSLAVDIV----AANKRGADDRRGARLFSGGAARLRSSFASKKTSFLTGRKLGGV 343

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A6H5JLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 1.760e-102
Identity = 175/227 (77.09%), Postives = 194/227 (85.46%), Query Frame = 0

Query:    6 RRKRTS--GINREMGL-GTAAG----------RFGRGARRRAGPGNGRGGLSRKTLNIVTNLESHTVGVRSKQELEEVEEEKRLAXXXXXXXXSLRQKGDDFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVR 219
            RRKRTS  GINRE    GT  G          RFGRG RRR+GPGNGRGGLS+KTLNIVTNL+SHT  VRS++E+E++EEE    XXXXXX  +LRQKGDDFD+TIRILLLGDSGVGKTSLM RFSEDKFAPT+ISTAGVD+KVQTLDI GKR+RCQIWDTAGQE+FHVITR YYRGAHGIALAYDVTD+DSFKNVNYWMANIQTH++P  R+QKMILGNKVDI+ R
Sbjct:  190 RRKRTSTSGINRERQFDGTVTGGTXXXXXXXSRFGRG-RRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEXXXXXXXXXXKENLRQKGDDFDRTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIEDR 415

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A836C8W2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA)

HSP 1 Score: 247 bits (631), Expect = 7.150e-78
Identity = 122/172 (70.93%), Postives = 143/172 (83.14%), Query Frame = 0

Query:   97 TIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAER--IQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVE 266
            TIRILLLGDSGVGKTSLMLR++ED F+P ++STAGVDFKV+ LDI G+R+RCQIWDTAGQEKFHVITRAYYRGAHGIAL YDV D DSFKNVNYW+ANIQTH+  A R  I K++LGNKVD+    R +SS  G +V +EFGV +FEVSAK G GV DAF +LA +IV+ +E
Sbjct:    2 TIRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVRHLDINGRRVRCQIWDTAGQEKFHVITRAYYRGAHGIALVYDVADADSFKNVNYWVANIQTHAPAAGREGICKVLLGNKVDLPAEHREVSSAAGNEVGEEFGVRYFEVSAKDGTGVQDAFDTLAREIVEGLE 173

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: W7U9Z1_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Z1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.530e-62
Identity = 129/249 (51.81%), Postives = 173/249 (69.48%), Query Frame = 0

Query:   32 RRAGPGNGRGGLSRKTLNIVTNLESHTVGVRSKQELEEVEEEKRLAXXXXXXXX------SLRQKGDDFDQ--TIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQ--TLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFG-VNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQ 269
            R  G G    GLS+KTLNIV NL+        +++           XXXXXXXX      SL     ++ +  +IRILLLGDSGVGKTSLM+R+SE++FAP ++STAGVDFKV+  TL+   ++++ QIWDTAGQE+ HVITR YY+G+HGIAL Y++TD DSF+NVNYWMANIQ H+   +++ K ++GNK D+    RAIS + G  +AKE+G ++FFE SAKSG  V  AF +LA+DIV+ +E +Q
Sbjct:   32 RNRGSGKRTAGLSQKTLNIVNNLQPAPATFSKERDXXXXXXXXXXXXXXXXXXXGSDPSSSLPSSVVEYTEFMSIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVRHLTLEESKRKVKVQIWDTAGQERMHVITRTYYKGSHGIALVYNLTDPDSFRNVNYWMANIQQHA--GDKVVKTLIGNKADL--TDRAISYEQGAAMAKEYGFMHFFETSAKSGANVHGAFNALALDIVRRIEEAQ 276

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)

HSP 1 Score: 200 bits (508), Expect = 7.060e-60
Identity = 93/181 (51.38%), Postives = 135/181 (74.59%), Query Frame = 0

Query:   94 FDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAV-EASQKRVD 273
            +D  I++LL+GDSGVGK+ ++LR+S+D F  + I+T G+DFKV+T+D+ GKRI+ QIWDTAGQE+F  IT AYYRGA GI L YDVTD+ SF+N+  WM  I+ ++  +  + K+++GNK D+D  +RA+++K G D+A EFG+ FFE SAKS   + +AF S+AVDI + + E+   R+D
Sbjct:    7 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNA--SSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLD 185

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A7R9U6W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W6_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.170e-59
Identity = 99/163 (60.74%), Postives = 129/163 (79.14%), Query Frame = 0

Query:   99 RILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDI 261
            R+LLLGDSGVGKTSLMLR+SEDKFAP ++STAGVDFK++ + +R KR+R QIWDTAGQEKFHVITR++Y+GAHGI L Y VTD DSF NV YWMANI  H+  +  ++++I+GNK D+ + QR ++ + G ++A EFG  FFE SA +G  V++A  +LA DI
Sbjct:  126 RLLLLGDSGVGKTSLMLRYSEDKFAPVLLSTAGVDFKMRRVVLRNKRVRLQIWDTAGQEKFHVITRSFYKGAHGICLVYSVTDLDSFNNVRYWMANIHEHA--SAHVRRIIVGNKSDLTL-QRVVTEQMGRELADEFGDPFFETSALTGSNVAEAMQTLAEDI 285

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A7S0RQX4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RQX4_9CHLO)

HSP 1 Score: 198 bits (503), Expect = 1.790e-59
Identity = 91/180 (50.56%), Postives = 134/180 (74.44%), Query Frame = 0

Query:   87 LRQKGDDFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVE 266
            + ++  D+D  I++LL+GDSGVGK+ L+LRFS+D F  + I+T G+DFK++T+++ GKR++ QIWDTAGQE+F  IT AYYRGA GI L YDVTDE SF N+  W+ NI+ H+  +E + K+++GNK D+D  +RA+  + G ++A EFG+ FFE SAK+   V DAF++LA DI+  ++
Sbjct:    1 MSRQRQDYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHA--SESVHKILIGNKSDMDESKRAVPREKGQELAAEFGIPFFETSAKANVQVEDAFFALARDIMHKLQ 178

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A067DQV1_CITSI (Uncharacterized protein n=4 Tax=Sapindales TaxID=41937 RepID=A0A067DQV1_CITSI)

HSP 1 Score: 199 bits (506), Expect = 1.880e-59
Identity = 91/183 (49.73%), Postives = 131/183 (71.58%), Query Frame = 0

Query:   93 DFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQKRVDDE 275
            D+D  I++LL+GDSGVGK+ L+LRFS+D F  + I+T G+DFK++T+++ GKRI+ QIWDTAGQE+F  IT AYYRGA GI L YDVTDE SF N+  WM NI  H+  A+ + K+++GNK D+D  +RA+ +  G ++A E+G+ FFE SAK+   V   F+S+A +I Q +  S  + + +
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHA--ADNVNKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEPQ 191

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 199 bits (505), Expect = 1.930e-59
Identity = 92/181 (50.83%), Postives = 133/181 (73.48%), Query Frame = 0

Query:   94 FDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAV-EASQKRVD 273
            +D  +++LL+GDSGVGK+ L++R+S+D F  + I+T G+DFKV+T+D+ GKR++ QIWDTAGQE+F  IT AYYRGA GI L YDVTD+ SF+NV  WM  IQ H+ P   + K+++GNK D+D  +R ++++ G ++A E+GV FFE SAKS   V +AF S+AVD+ + + E    R+D
Sbjct:    7 YDLLVKLLLIGDSGVGKSCLLMRYSDDTFTSSFITTIGIDFKVKTIDVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASP--NVNKILIGNKCDVDPSERVVTTQQGEELAAEYGVQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLD 185

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BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A0G4G3R3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G3R3_VITBC)

HSP 1 Score: 198 bits (504), Expect = 2.820e-59
Identity = 99/200 (49.50%), Postives = 141/200 (70.50%), Query Frame = 0

Query:   94 FDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQKRVDDERRGTRVFGSGRLRSLANR 293
            +D  I++LL+GDSGVGK+ L+ RFS+D+F P+ I+T G+DFK++T+DI GKR++ QIWDTAGQE+F  IT+AYYR A GI L YDVT  +SF+N+  WM  I  H+  AE + K+++GNK D+   +  +SS+   D+A E+GV F E SAKSG GV++AF +LA DI+Q + A+Q++    +    V G    R +ANR
Sbjct:    7 YDYLIKLLLIGDSGVGKSCLLFRFSDDQFTPSHITTIGIDFKIKTIDIDGKRVKLQIWDTAGQERFRTITQAYYRSAMGILLVYDVTSPESFQNIRNWMRQIDAHA--AENVNKILVGNKADL---ENIVSSERARDLADEYGVPFIETSAKSGQGVAEAFVTLARDIIQRLVATQQQHQKAQENI-VLGRDSGRPMANR 200

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FX24_ECTSI	1.820e-137	73.57	Rab8C, RAB family GTPase n=1 Tax=Ectocarpus silicu...	[more]
A0A6H5JLN2_9PHAE	1.760e-102	77.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C8W2_9STRA	7.150e-78	70.93	Ras family-domain-containing protein n=1 Tax=Tribo...	[more]
W7U9Z1_9STRA	1.530e-62	51.81	Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42...	[more]
H3G925_PHYRM	7.060e-60	51.38	Uncharacterized protein n=19 Tax=Oomycota TaxID=47...	[more]
A0A7R9U6W6_9STRA	1.170e-59	60.74	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A7S0RQX4_9CHLO	1.790e-59	50.56	Hypothetical protein (Fragment) n=1 Tax=Pyramimona...	[more]
A0A067DQV1_CITSI	1.880e-59	49.73	Uncharacterized protein n=4 Tax=Sapindales TaxID=4...	[more]
A0A067CHF2_SAPPC	1.930e-59	50.83	Uncharacterized protein n=5 Tax=Saprolegniaceae Ta...	[more]
A0A0G4G3R3_VITBC	2.820e-59	49.50	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..90
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 121..137 score: 29.8 coord: 203..216 score: 34.9 coord: 139..161 score: 44.96 coord: 239..261 score: 38.25 coord: 98..119 score: 44.13
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 98..264 e-value: 8.4E-74 score: 261.2
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 100..265 e-value: 1.2E-9 score: 4.8
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 81..265 e-value: 0.0026 score: 2.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 103..307 e-value: 1.1E-4 score: 17.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 95..264 e-value: 4.6E-15 score: 66.0
None	No IPR available	GENE3D	3.40.50.300		coord: 86..278 e-value: 1.1E-58 score: 199.6
None	No IPR available	PANTHER	PTHR24073:SF1022		coord: 89..275
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 89..275
None	No IPR available	PROSITE	PS51419	RAB	coord: 93..300 score: 30.095
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 99..261 e-value: 1.0E-52 score: 178.0
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 96..255 e-value: 1.4E-23 score: 81.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 95..271

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2597	contig	H-paniculata_contig2597:2440..12069 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2597.7084.1	mRNA_H-paniculata_contig2597.7084.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2597 2439..12069 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2597.7084.1 ID=prot_H-paniculata_contig2597.7084.1|Name=mRNA_H-paniculata_contig2597.7084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
TILSARRKRTSGINREMGLGTAAGRFGRGARRRAGPGNGRGGLSRKTLNI
VTNLESHTVGVRSKQELEEVEEEKRLAEEERRLKESLRQKGDDFDQTIRI
LLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQI
WDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSD
PAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGV
SDAFYSLAVDIVQAVEASQKRVDDERRGTRVFGSGRLRSLANRKTSFNLS
RRTLGVLKGTGSIGGGGSSGGGGGGGISSISSGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase