mRNA_H-paniculata_contig2597.7084.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: D7FX24_ECTSI (Rab8C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI) HSP 1 Score: 405 bits (1040), Expect = 1.820e-137 Identity = 231/314 (73.57%), Postives = 259/314 (82.48%), Query Frame = 1
Query: 16 RRKRTS--GINREM--------GLGTAAGRFGRGARRRAGPGNGRGGLSRKTLNIVTNLESHTVGVRSKQELEEVEEEKRLAXXXXXXXXSLRQKGDDFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQKRVDDERRGTRVF--GSGRLRS-LANRKTSFNLSRRTLGV 918
RRKRTS GINRE G G GRFG G RRR+GPGNGRGGLS+KTLNIVTNL+SHT VRS++E+E++E XXXXXXX +LRQKGDDFD TIRILLLGDSGVGKTSLM RFSEDKFAPT+ISTAGVD+KVQTLDI GKR+RCQIWDTAGQE+FHVITR YYRGAHGIALAYDVTD+DSFKNVNYWMANIQTH++P R+QKMILGNKVDI+ RAIS+KDG DVAKEFGV FFEVSAK+G+GVSDAFYSLAVDIV A+ KR D+RRG R+F G+ RLRS A++KTSF R+ GV
Sbjct: 37 RRKRTSTSGINRERQFDGTVTGGTGGTGGRFG-GGRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEXXXXXXXXXXXXXENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIE--DRAISTKDGQDVAKEFGVRFFEVSAKNGYGVSDAFYSLAVDIV----AANKRGADDRRGARLFSGGAARLRSSFASKKTSFLTGRKLGGV 343
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A6H5JLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE) HSP 1 Score: 317 bits (811), Expect = 1.760e-102 Identity = 175/227 (77.09%), Postives = 194/227 (85.46%), Query Frame = 1
Query: 16 RRKRTS--GINREMGL-GTAAG----------RFGRGARRRAGPGNGRGGLSRKTLNIVTNLESHTVGVRSKQELEEVEEEKRLAXXXXXXXXSLRQKGDDFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVR 657
RRKRTS GINRE GT G RFGRG RRR+GPGNGRGGLS+KTLNIVTNL+SHT VRS++E+E++EEE XXXXXX +LRQKGDDFD+TIRILLLGDSGVGKTSLM RFSEDKFAPT+ISTAGVD+KVQTLDI GKR+RCQIWDTAGQE+FHVITR YYRGAHGIALAYDVTD+DSFKNVNYWMANIQTH++P R+QKMILGNKVDI+ R
Sbjct: 190 RRKRTSTSGINRERQFDGTVTGGTXXXXXXXSRFGRG-RRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEXXXXXXXXXXKENLRQKGDDFDRTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIEDR 415
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A836C8W2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA) HSP 1 Score: 247 bits (631), Expect = 7.150e-78 Identity = 122/172 (70.93%), Postives = 143/172 (83.14%), Query Frame = 1
Query: 289 TIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAER--IQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVE 798
TIRILLLGDSGVGKTSLMLR++ED F+P ++STAGVDFKV+ LDI G+R+RCQIWDTAGQEKFHVITRAYYRGAHGIAL YDV D DSFKNVNYW+ANIQTH+ A R I K++LGNKVD+ R +SS G +V +EFGV +FEVSAK G GV DAF +LA +IV+ +E
Sbjct: 2 TIRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVRHLDINGRRVRCQIWDTAGQEKFHVITRAYYRGAHGIALVYDVADADSFKNVNYWVANIQTHAPAAGREGICKVLLGNKVDLPAEHREVSSAAGNEVGEEFGVRYFEVSAKDGTGVQDAFDTLAREIVEGLE 173
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: W7U9Z1_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Z1_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.530e-62 Identity = 129/249 (51.81%), Postives = 173/249 (69.48%), Query Frame = 1
Query: 94 RRAGPGNGRGGLSRKTLNIVTNLESHTVGVRSKQELEEVEEEKRLAXXXXXXXX------SLRQKGDDFDQ--TIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQ--TLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFG-VNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQ 807
R G G GLS+KTLNIV NL+ +++ XXXXXXXX SL ++ + +IRILLLGDSGVGKTSLM+R+SE++FAP ++STAGVDFKV+ TL+ ++++ QIWDTAGQE+ HVITR YY+G+HGIAL Y++TD DSF+NVNYWMANIQ H+ +++ K ++GNK D+ RAIS + G +AKE+G ++FFE SAKSG V AF +LA+DIV+ +E +Q
Sbjct: 32 RNRGSGKRTAGLSQKTLNIVNNLQPAPATFSKERDXXXXXXXXXXXXXXXXXXXGSDPSSSLPSSVVEYTEFMSIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVRHLTLEESKRKVKVQIWDTAGQERMHVITRTYYKGSHGIALVYNLTDPDSFRNVNYWMANIQQHA--GDKVVKTLIGNKADL--TDRAISYEQGAAMAKEYGFMHFFETSAKSGANVHGAFNALALDIVRRIEEAQ 276
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM) HSP 1 Score: 200 bits (508), Expect = 7.060e-60 Identity = 93/181 (51.38%), Postives = 135/181 (74.59%), Query Frame = 1
Query: 280 FDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAV-EASQKRVD 819
+D I++LL+GDSGVGK+ ++LR+S+D F + I+T G+DFKV+T+D+ GKRI+ QIWDTAGQE+F IT AYYRGA GI L YDVTD+ SF+N+ WM I+ ++ + + K+++GNK D+D +RA+++K G D+A EFG+ FFE SAKS + +AF S+AVDI + + E+ R+D
Sbjct: 7 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNA--SSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLD 185
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A7R9U6W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W6_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.170e-59 Identity = 99/163 (60.74%), Postives = 129/163 (79.14%), Query Frame = 1
Query: 295 RILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDI 783
R+LLLGDSGVGKTSLMLR+SEDKFAP ++STAGVDFK++ + +R KR+R QIWDTAGQEKFHVITR++Y+GAHGI L Y VTD DSF NV YWMANI H+ + ++++I+GNK D+ + QR ++ + G ++A EFG FFE SA +G V++A +LA DI
Sbjct: 126 RLLLLGDSGVGKTSLMLRYSEDKFAPVLLSTAGVDFKMRRVVLRNKRVRLQIWDTAGQEKFHVITRSFYKGAHGICLVYSVTDLDSFNNVRYWMANIHEHA--SAHVRRIIVGNKSDLTL-QRVVTEQMGRELADEFGDPFFETSALTGSNVAEAMQTLAEDI 285
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A7S0RQX4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RQX4_9CHLO) HSP 1 Score: 198 bits (503), Expect = 1.790e-59 Identity = 91/180 (50.56%), Postives = 134/180 (74.44%), Query Frame = 1
Query: 259 LRQKGDDFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVE 798
+ ++ D+D I++LL+GDSGVGK+ L+LRFS+D F + I+T G+DFK++T+++ GKR++ QIWDTAGQE+F IT AYYRGA GI L YDVTDE SF N+ W+ NI+ H+ +E + K+++GNK D+D +RA+ + G ++A EFG+ FFE SAK+ V DAF++LA DI+ ++
Sbjct: 1 MSRQRQDYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHA--SESVHKILIGNKSDMDESKRAVPREKGQELAAEFGIPFFETSAKANVQVEDAFFALARDIMHKLQ 178
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A067DQV1_CITSI (Uncharacterized protein n=4 Tax=Sapindales TaxID=41937 RepID=A0A067DQV1_CITSI) HSP 1 Score: 199 bits (506), Expect = 1.880e-59 Identity = 91/183 (49.73%), Postives = 131/183 (71.58%), Query Frame = 1
Query: 277 DFDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQKRVDDE 825
D+D I++LL+GDSGVGK+ L+LRFS+D F + I+T G+DFK++T+++ GKRI+ QIWDTAGQE+F IT AYYRGA GI L YDVTDE SF N+ WM NI H+ A+ + K+++GNK D+D +RA+ + G ++A E+G+ FFE SAK+ V F+S+A +I Q + S + + +
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHA--ADNVNKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEPQ 191
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC) HSP 1 Score: 199 bits (505), Expect = 1.930e-59 Identity = 92/181 (50.83%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 280 FDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAV-EASQKRVD 819
+D +++LL+GDSGVGK+ L++R+S+D F + I+T G+DFKV+T+D+ GKR++ QIWDTAGQE+F IT AYYRGA GI L YDVTD+ SF+NV WM IQ H+ P + K+++GNK D+D +R ++++ G ++A E+GV FFE SAKS V +AF S+AVD+ + + E R+D
Sbjct: 7 YDLLVKLLLIGDSGVGKSCLLMRYSDDTFTSSFITTIGIDFKVKTIDVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASP--NVNKILIGNKCDVDPSERVVTTQQGEELAAEYGVQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLD 185
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Match: A0A0G4G3R3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G3R3_VITBC) HSP 1 Score: 198 bits (504), Expect = 2.820e-59 Identity = 99/200 (49.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 280 FDQTIRILLLGDSGVGKTSLMLRFSEDKFAPTMISTAGVDFKVQTLDIRGKRIRCQIWDTAGQEKFHVITRAYYRGAHGIALAYDVTDEDSFKNVNYWMANIQTHSDPAERIQKMILGNKVDIDVRQRAISSKDGTDVAKEFGVNFFEVSAKSGHGVSDAFYSLAVDIVQAVEASQKRVDDERRGTRVFGSGRLRSLANR 879
+D I++LL+GDSGVGK+ L+ RFS+D+F P+ I+T G+DFK++T+DI GKR++ QIWDTAGQE+F IT+AYYR A GI L YDVT +SF+N+ WM I H+ AE + K+++GNK D+ + +SS+ D+A E+GV F E SAKSG GV++AF +LA DI+Q + A+Q++ + V G R +ANR
Sbjct: 7 YDYLIKLLLIGDSGVGKSCLLFRFSDDQFTPSHITTIGIDFKIKTIDIDGKRVKLQIWDTAGQERFRTITQAYYRSAMGILLVYDVTSPESFQNIRNWMRQIDAHA--AENVNKILVGNKADL---ENIVSSERARDLADEYGVPFIETSAKSGQGVAEAFVTLARDIIQRLVATQQQHQKAQENI-VLGRDSGRPMANR 200 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2597.7084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2597.7084.1 >prot_H-paniculata_contig2597.7084.1 ID=prot_H-paniculata_contig2597.7084.1|Name=mRNA_H-paniculata_contig2597.7084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp TILSARRKRTSGINREMGLGTAAGRFGRGARRRAGPGNGRGGLSRKTLNIback to top mRNA from alignment at H-paniculata_contig2597:2439..12069- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2597.7084.1 ID=mRNA_H-paniculata_contig2597.7084.1|Name=mRNA_H-paniculata_contig2597.7084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9631bp|location=Sequence derived from alignment at H-paniculata_contig2597:2439..12069- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2597:2439..12069- >mRNA_H-paniculata_contig2597.7084.1 ID=mRNA_H-paniculata_contig2597.7084.1|Name=mRNA_H-paniculata_contig2597.7084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2004bp|location=Sequence derived from alignment at H-paniculata_contig2597:2439..12069- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |