mRNA_H-paniculata_contig25916.7067.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE) HSP 1 Score: 265 bits (676), Expect = 7.100e-85 Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q WSL+VIES E GGFRTVIAEVSG+KVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVA+MPEVDEV V IRPED++I TARSGGSGGQNVNKVESAVDL HKPTGIRIFCTQERSQLKNR+VAMKLLR+++YDIELEKQQ+E SGNRKAQ
Sbjct: 220 QGWSLKVIESAMVEAGGFRTVIAEVSGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAETSGNRKAQ 374
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.870e-75 Identity = 116/153 (75.82%), Postives = 139/153 (90.85%), Query Frame = 1
Query: 7 WSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
W+LRV+E A + GGF++++AEV G+ VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVAVMPEVDEVTV I P D+D+ TAR+GGSGGQNVNKVE+AVDL HKPTGIRIFC QERSQLKN+++AM +LR++LY+IELEKQQ+ +SGNR+AQ
Sbjct: 150 WTLRVVEEAAADMGGFKSIVAEVRGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEVDEVTVRIDPGDIDMHTARAGGSGGQNVNKVETAVDLFHKPTGIRIFCQQERSQLKNKELAMSILRSRLYEIELEKQQAAVSGNRRAQ 302
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A140ECJ7_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140ECJ7_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.240e-72 Identity = 110/155 (70.97%), Postives = 141/155 (90.97%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q W +R+I+ + + GG++T + E+ G+KVYSK+K+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTV+I P+++++ TARSGGSGGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKN+++AM LLR+KLY++ELEKQQ +++G R++Q
Sbjct: 207 QGWKVRMIDESRNDEGGYKTAVLEIQGDKVYSKMKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVKIDPKEIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMTLLRSKLYEMELEKQQEQITGQRRSQ 361
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK) HSP 1 Score: 231 bits (590), Expect = 2.610e-72 Identity = 114/155 (73.55%), Postives = 138/155 (89.03%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q W+ +IE +A + GG ++ EV GE VYSKLKYEAGVHRVQRVPATETQGRVHTSTATVA+MPEVDEVTV+I P+D++++TARSGG+GGQNVNKVE+A DL HKPTGIRIFCTQERSQLKN+++AM LLRA+LY++ELEKQ+SE+SG R+AQ
Sbjct: 196 QGWACTLIEESAADMGGVKSCTLEVRGEAVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHKPTGIRIFCTQERSQLKNKEMAMNLLRARLYEMELEKQRSEVSGARRAQ 350
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A7S2W3G7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3G7_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.770e-72 Identity = 114/155 (73.55%), Postives = 136/155 (87.74%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q W +V+E +AG+ GG + E+SGE VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVDEV V I P+D+ I+TARSGG+GGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKNR++AMK LR++LY +ELE Q +E+SGNRK+Q
Sbjct: 185 QGWRFKVLEDSAGDDGGVKNAAYEISGESVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVAVHIDPKDVTITTARSGGAGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNRELAMKSLRSRLYAMELEAQMAEISGNRKSQ 339
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A7S2KLX4_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KLX4_BIGNA) HSP 1 Score: 224 bits (570), Expect = 3.040e-71 Identity = 107/155 (69.03%), Postives = 138/155 (89.03%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q WS +V+ES+ E+GG++T I EV+G++VYSK+K EAGVHRVQRVPATE+QGRVHTSTATVA+MP+VD+VTV+I P+++ + TARS G+GGQNVNKVE+A+DL+H PTGIRIFC QERSQLKN+++A ++LR KLY+IELEKQ SE++GNR AQ
Sbjct: 46 QGWSTKVVESSEAEHGGYKTAIVEVTGDRVYSKMKTEAGVHRVQRVPATESQGRVHTSTATVAIMPQVDDVTVKIDPKEIKLQTARSSGAGGQNVNKVETAIDLIHIPTGIRIFCQQERSQLKNKELAFQILRNKLYEIELEKQMSEVAGNRAAQ 200
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A6U9R153_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9R153_9CHLO) HSP 1 Score: 226 bits (576), Expect = 1.470e-70 Identity = 111/155 (71.61%), Postives = 135/155 (87.10%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q W + + ++ E GG++ + ++SG+KVYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVDEV V+I P D++ISTARSGG+GGQNVNKVE+AVDL HKPTGIRIFCT+ERSQLKN++ A+ LLRAKLY+IELEKQ SE+S R+AQ
Sbjct: 171 QGWKVEYVSNSIAESGGYKECVLQISGDKVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVMVKIDPGDIEISTARSGGAGGQNVNKVETAVDLTHKPTGIRIFCTEERSQLKNKERALSLLRAKLYEIELEKQLSEVSSRRRAQ 325
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A4D9DHG8_9STRA (RF_PROK_I domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHG8_9STRA) HSP 1 Score: 224 bits (571), Expect = 4.640e-70 Identity = 106/153 (69.28%), Postives = 136/153 (88.89%), Query Frame = 1
Query: 7 WSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
W +RV+E + + GG++ + E+ G+KVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEV V+I P+D+ ++TARSGGSGGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKN+++AM +LR++L+D+E EKQ+ ++G R++Q
Sbjct: 150 WRVRVVEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVKIDPKDITLTTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMSMLRSRLFDLEQEKQRDAVAGQRRSQ 302
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A140ECJ9_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECJ9_9STRA) HSP 1 Score: 225 bits (573), Expect = 6.450e-70 Identity = 108/155 (69.68%), Postives = 136/155 (87.74%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q W R++ + GG++ + EV G+KVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEV V I P+D+++ TARSGGSGGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKN+++AM++LR+KLY++E+EKQ +E++G R++Q
Sbjct: 185 QGWRSRMVSEARSDDGGYKMAVLEVHGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVRIDPKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQILRSKLYEMEVEKQMNEVTGQRRSQ 339
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: RF1_SYNP2 (Peptide chain release factor 1 n=6 Tax=unclassified Synechococcus TaxID=2626047 RepID=RF1_SYNP2) HSP 1 Score: 223 bits (568), Expect = 1.240e-69 Identity = 106/155 (68.39%), Postives = 137/155 (88.39%), Query Frame = 1
Query: 1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 465
Q+W ++++ +A + GGF+ VI E+ GE+VYSKLKYEAGVHRVQRVP TE GRVHTSTAT+AVMPEVD+V VEI P+D++++TARSGG+GGQNVNKVE+AVDL HKPTGIR+FCT+ERSQL+NR+ AM++LRAKLY++EL++QQ E+S RK+Q
Sbjct: 147 QNWRVKLLSESAADMGGFKAVILEIQGEQVYSKLKYEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDDVEVEIDPKDIEMTTARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEEVSSMRKSQ 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25916.7067.1 >prot_H-paniculata_contig25916.7067.1 ID=prot_H-paniculata_contig25916.7067.1|Name=mRNA_H-paniculata_contig25916.7067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATEback to top mRNA from alignment at H-paniculata_contig25916:1383..3444+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25916.7067.1 ID=mRNA_H-paniculata_contig25916.7067.1|Name=mRNA_H-paniculata_contig25916.7067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2062bp|location=Sequence derived from alignment at H-paniculata_contig25916:1383..3444+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25916:1383..3444+ >mRNA_H-paniculata_contig25916.7067.1 ID=mRNA_H-paniculata_contig25916.7067.1|Name=mRNA_H-paniculata_contig25916.7067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at H-paniculata_contig25916:1383..3444+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |