prot_H-paniculata_contig25916.7067.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25916.7067.1
Unique Nameprot_H-paniculata_contig25916.7067.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length155
Homology
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 7.100e-85
Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q WSL+VIES   E GGFRTVIAEVSG+KVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVA+MPEVDEV V IRPED++I TARSGGSGGQNVNKVESAVDL HKPTGIRIFCTQERSQLKNR+VAMKLLR+++YDIELEKQQ+E SGNRKAQ
Sbjct:  220 QGWSLKVIESAMVEAGGFRTVIAEVSGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAETSGNRKAQ 374          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.870e-75
Identity = 116/153 (75.82%), Postives = 139/153 (90.85%), Query Frame = 0
Query:    3 WSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            W+LRV+E  A + GGF++++AEV G+ VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVAVMPEVDEVTV I P D+D+ TAR+GGSGGQNVNKVE+AVDL HKPTGIRIFC QERSQLKN+++AM +LR++LY+IELEKQQ+ +SGNR+AQ
Sbjct:  150 WTLRVVEEAAADMGGFKSIVAEVRGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEVDEVTVRIDPGDIDMHTARAGGSGGQNVNKVETAVDLFHKPTGIRIFCQQERSQLKNKELAMSILRSRLYEIELEKQQAAVSGNRRAQ 302          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A140ECJ7_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140ECJ7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.240e-72
Identity = 110/155 (70.97%), Postives = 141/155 (90.97%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q W +R+I+ +  + GG++T + E+ G+KVYSK+K+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTV+I P+++++ TARSGGSGGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKN+++AM LLR+KLY++ELEKQQ +++G R++Q
Sbjct:  207 QGWKVRMIDESRNDEGGYKTAVLEIQGDKVYSKMKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVKIDPKEIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMTLLRSKLYEMELEKQQEQITGQRRSQ 361          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK)

HSP 1 Score: 231 bits (590), Expect = 2.610e-72
Identity = 114/155 (73.55%), Postives = 138/155 (89.03%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q W+  +IE +A + GG ++   EV GE VYSKLKYEAGVHRVQRVPATETQGRVHTSTATVA+MPEVDEVTV+I P+D++++TARSGG+GGQNVNKVE+A DL HKPTGIRIFCTQERSQLKN+++AM LLRA+LY++ELEKQ+SE+SG R+AQ
Sbjct:  196 QGWACTLIEESAADMGGVKSCTLEVRGEAVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHKPTGIRIFCTQERSQLKNKEMAMNLLRARLYEMELEKQRSEVSGARRAQ 350          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A7S2W3G7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3G7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.770e-72
Identity = 114/155 (73.55%), Postives = 136/155 (87.74%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q W  +V+E +AG+ GG +    E+SGE VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVDEV V I P+D+ I+TARSGG+GGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKNR++AMK LR++LY +ELE Q +E+SGNRK+Q
Sbjct:  185 QGWRFKVLEDSAGDDGGVKNAAYEISGESVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVAVHIDPKDVTITTARSGGAGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNRELAMKSLRSRLYAMELEAQMAEISGNRKSQ 339          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A7S2KLX4_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KLX4_BIGNA)

HSP 1 Score: 224 bits (570), Expect = 3.040e-71
Identity = 107/155 (69.03%), Postives = 138/155 (89.03%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q WS +V+ES+  E+GG++T I EV+G++VYSK+K EAGVHRVQRVPATE+QGRVHTSTATVA+MP+VD+VTV+I P+++ + TARS G+GGQNVNKVE+A+DL+H PTGIRIFC QERSQLKN+++A ++LR KLY+IELEKQ SE++GNR AQ
Sbjct:   46 QGWSTKVVESSEAEHGGYKTAIVEVTGDRVYSKMKTEAGVHRVQRVPATESQGRVHTSTATVAIMPQVDDVTVKIDPKEIKLQTARSSGAGGQNVNKVETAIDLIHIPTGIRIFCQQERSQLKNKELAFQILRNKLYEIELEKQMSEVAGNRAAQ 200          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A6U9R153_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9R153_9CHLO)

HSP 1 Score: 226 bits (576), Expect = 1.470e-70
Identity = 111/155 (71.61%), Postives = 135/155 (87.10%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q W +  + ++  E GG++  + ++SG+KVYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVDEV V+I P D++ISTARSGG+GGQNVNKVE+AVDL HKPTGIRIFCT+ERSQLKN++ A+ LLRAKLY+IELEKQ SE+S  R+AQ
Sbjct:  171 QGWKVEYVSNSIAESGGYKECVLQISGDKVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVMVKIDPGDIEISTARSGGAGGQNVNKVETAVDLTHKPTGIRIFCTEERSQLKNKERALSLLRAKLYEIELEKQLSEVSSRRRAQ 325          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A4D9DHG8_9STRA (RF_PROK_I domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHG8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 4.640e-70
Identity = 106/153 (69.28%), Postives = 136/153 (88.89%), Query Frame = 0
Query:    3 WSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            W +RV+E +  + GG++  + E+ G+KVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEV V+I P+D+ ++TARSGGSGGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKN+++AM +LR++L+D+E EKQ+  ++G R++Q
Sbjct:  150 WRVRVVEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVKIDPKDITLTTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMSMLRSRLFDLEQEKQRDAVAGQRRSQ 302          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: A0A140ECJ9_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECJ9_9STRA)

HSP 1 Score: 225 bits (573), Expect = 6.450e-70
Identity = 108/155 (69.68%), Postives = 136/155 (87.74%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q W  R++     + GG++  + EV G+KVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEV V I P+D+++ TARSGGSGGQNVNKVE+AVDL+HKPTGIRIFCTQERSQLKN+++AM++LR+KLY++E+EKQ +E++G R++Q
Sbjct:  185 QGWRSRMVSEARSDDGGYKMAVLEVHGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVRIDPKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQILRSKLYEMEVEKQMNEVTGQRRSQ 339          
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Match: RF1_SYNP2 (Peptide chain release factor 1 n=6 Tax=unclassified Synechococcus TaxID=2626047 RepID=RF1_SYNP2)

HSP 1 Score: 223 bits (568), Expect = 1.240e-69
Identity = 106/155 (68.39%), Postives = 137/155 (88.39%), Query Frame = 0
Query:    1 QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVESAVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSGNRKAQ 155
            Q+W ++++  +A + GGF+ VI E+ GE+VYSKLKYEAGVHRVQRVP TE  GRVHTSTAT+AVMPEVD+V VEI P+D++++TARSGG+GGQNVNKVE+AVDL HKPTGIR+FCT+ERSQL+NR+ AM++LRAKLY++EL++QQ E+S  RK+Q
Sbjct:  147 QNWRVKLLSESAADMGGFKAVILEIQGEQVYSKLKYEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDDVEVEIDPKDIEMTTARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEEVSSMRKSQ 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25916.7067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZD5_9PHAE7.100e-8587.10RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CKN4_9STRA1.870e-7575.82Peptide chain release factor 1 n=1 Tax=Tribonema m... [more]
A0A140ECJ7_9STRA1.240e-7270.97Plastid peptide chain release factor 1 n=1 Tax=Tra... [more]
A0A6S9M8F3_HETAK2.610e-7273.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2W3G7_9STRA3.770e-7273.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KLX4_BIGNA3.040e-7169.03Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
A0A6U9R153_9CHLO1.470e-7071.61Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A4D9DHG8_9STRA4.640e-7069.28RF_PROK_I domain-containing protein n=3 Tax=Monodo... [more]
A0A140ECJ9_9STRA6.450e-7069.68Plastid peptide chain release factor 1 n=1 Tax=Vis... [more]
RF1_SYNP21.240e-6968.39Peptide chain release factor 1 n=6 Tax=unclassifie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 79..149
e-value: 1.6E-30
score: 106.4
NoneNo IPR availableGENE3D3.30.70.1660coord: 1..78
e-value: 3.2E-25
score: 90.6
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 1..155
NoneNo IPR availablePANTHERPTHR43804:SF4PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTICcoord: 1..155
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 2..154
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 1..62
e-value: 1.7E-24
score: 86.8
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 70..152
e-value: 9.4E-30
score: 102.9
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 86..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25916contigH-paniculata_contig25916:1383..3444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25916.7067.1mRNA_H-paniculata_contig25916.7067.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25916 1383..3444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25916.7067.1 ID=prot_H-paniculata_contig25916.7067.1|Name=mRNA_H-paniculata_contig25916.7067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
QSWSLRVIESTAGEYGGFRTVIAEVSGEKVYSKLKYEAGVHRVQRVPATE
TQGRVHTSTATVAVMPEVDEVTVEIRPEDLDISTARSGGSGGQNVNKVES
AVDLMHKPTGIRIFCTQERSQLKNRDVAMKLLRAKLYDIELEKQQSEMSG
NRKAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF
IPR000352Pep_chain_release_fac_I