prot_H-paniculata_contig25881.7054.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25881.7054.1
Unique Nameprot_H-paniculata_contig25881.7054.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: D7FPY1_ECTSI (FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY1_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.240e-26
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 MSWLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLREED 55
            M WLEECEITYTQTAKPWNWKAMM DIR DNRFYLDT EDGE+KPAGWARLREED
Sbjct:  894 MQWLEECEITYTQTAKPWNWKAMMADIRGDNRFYLDTYEDGERKPAGWARLREED 948          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: A0A835Z130_9STRA (FACT complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z130_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.980e-13
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 MSWLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDT-----DEDGEKKPAGWARLREED 55
            M WL +  ITYTQT K WNWKA++  +R D RFYLDT      EDG KKPAGW  LR +D
Sbjct:  701 MGWLVDSSITYTQTDKTWNWKAVLNLVREDERFYLDTGKSTEQEDGTKKPAGWTFLRMQD 760          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: A0A484E5A2_BRELC (FACT complex subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5A2_BRELC)

HSP 1 Score: 65.1 bits (157), Expect = 3.730e-10
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLR 52
            WL++ +I +T      NWK++M  I+SDNRFYLDTDEDG  KPAGW  L+
Sbjct:  659 WLDDIDICFTTGTANLNWKSIMSTIKSDNRFYLDTDEDGVPKPAGWEFLK 708          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: A0A024G600_9STRA (FACT complex subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G600_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.210e-10
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLREE 54
            WL++ +I +T      NWK++M  I++DNRFYLDTDEDG  KPAGW  L+ E
Sbjct:  951 WLDDIDICFTSGTANLNWKSIMATIKADNRFYLDTDEDGVPKPAGWEFLKME 1002          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: A0A0N7L4C5_PLAHL (FACT complex subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4C5_PLAHL)

HSP 1 Score: 64.7 bits (156), Expect = 5.330e-10
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLREE 54
            WL++ +I +T      NWK++M  I+SDNRFYLDTD+DG  KPAGW  L+ E
Sbjct:  930 WLDDIDICFTTGTANLNWKSIMSTIKSDNRFYLDTDDDGVPKPAGWEFLKME 981          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: F0WM38_9STRA (FACT complex subunit n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM38_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.330e-10
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLREE 54
            WL++ +I +T      NWK++M  I++DNRFYLDTDEDG  KPAGW  L+ E
Sbjct: 1953 WLDDIDICFTSGTANLNWKSIMATIKADNRFYLDTDEDGVPKPAGWEFLKME 2004          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: F0YPC0_AURAN (FACT complex subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPC0_AURAN)

HSP 1 Score: 64.3 bits (155), Expect = 6.100e-10
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLREED 55
            WL +C +TYT      +WK++M  +RSD+RFY +TDE+GE KPAGW  L+ +D
Sbjct:  236 WLTDCSLTYTAGQASMSWKSVMNLVRSDDRFYEETDENGEPKPAGWQFLQADD 288          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: D8LVG5_BLAHO (FACT complex subunit n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVG5_BLAHO)

HSP 1 Score: 64.3 bits (155), Expect = 7.010e-10
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLREE 54
            WL+   IT+T++A  +NWK  M  +R  +RF++DTDEDG+KKP GW  L E+
Sbjct:  700 WLDSINITFTESATCYNWKEFMNAVRDYDRFWMDTDEDGQKKPIGWETLTED 751          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: A0A067CG51_SAPPC (FACT complex subunit n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CG51_SAPPC)

HSP 1 Score: 63.2 bits (152), Expect = 1.810e-9
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLR 52
            WL++ +I +T+     NWK +M  I+SD+RFYLDTDEDG  KPAGW  L+
Sbjct:  898 WLDDIDICFTEGTANLNWKQIMATIKSDDRFYLDTDEDGVPKPAGWEFLK 947          
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Match: T0QTN4_SAPDV (FACT complex subunit n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QTN4_SAPDV)

HSP 1 Score: 63.2 bits (152), Expect = 1.810e-9
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    3 WLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWARLR 52
            WL++ +I +T+     NWK +M  I+SD+RFYLDTDEDG  KPAGW  L+
Sbjct:  911 WLDDIDICFTEGTANLNWKQIMATIKSDDRFYLDTDEDGVPKPAGWEFLK 960          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25881.7054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY1_ECTSI1.240e-2690.91FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z130_9STRA3.980e-1358.33FACT complex subunit n=1 Tax=Tribonema minus TaxID... [more]
A0A484E5A2_BRELC3.730e-1056.00FACT complex subunit n=1 Tax=Bremia lactucae TaxID... [more]
A0A024G600_9STRA5.210e-1053.85FACT complex subunit n=1 Tax=Albugo candida TaxID=... [more]
A0A0N7L4C5_PLAHL5.330e-1053.85FACT complex subunit n=1 Tax=Plasmopara halstedii ... [more]
F0WM38_9STRA5.330e-1053.85FACT complex subunit n=1 Tax=Albugo laibachii Nc14... [more]
F0YPC0_AURAN6.100e-1050.94FACT complex subunit n=1 Tax=Aureococcus anophagef... [more]
D8LVG5_BLAHO7.010e-1050.00FACT complex subunit n=1 Tax=Blastocystis hominis ... [more]
A0A067CG51_SAPPC1.810e-954.00FACT complex subunit n=1 Tax=Saprolegnia parasitic... [more]
T0QTN4_SAPDV1.810e-954.00FACT complex subunit n=2 Tax=Saprolegniaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..56
e-value: 2.3E-7
score: 32.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25881contigH-paniculata_contig25881:651..1480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25881.7054.1mRNA_H-paniculata_contig25881.7054.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25881 651..1492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25881.7054.1 ID=prot_H-paniculata_contig25881.7054.1|Name=mRNA_H-paniculata_contig25881.7054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MSWLEECEITYTQTAKPWNWKAMMQDIRSDNRFYLDTDEDGEKKPAGWAR
LREEDSDDEEDDGDGESDFEAESESESEDDDDSEEDSDDDDDDDDDSEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf