prot_H-paniculata_contig25870.7053.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25870.7053.1
Unique Nameprot_H-paniculata_contig25870.7053.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Match: D7FYB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB6_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.100e-16
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   63 MQACLDRGDTNGAGQAQRRLDVWAKKRETISGAT---VPMVKAAVAARVPGFNVYTR 116
            MQAC+DRGD  GA QAQRRL VWAKKR+ +SG +   VP+VKAAVAARVP   ++TR
Sbjct:    1 MQACVDRGDAGGAAQAQRRLSVWAKKRKGMSGVSPSAVPLVKAAVAARVPSLKIFTR 57          
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Match: A0A2N1ZRH3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-10 TaxID=2013792 RepID=A0A2N1ZRH3_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 2.670e-7
Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 0
Query:   38 FLAMKAGADACVVGASNPLPELAVRMQACLDRGDTNGAGQAQRRLDVWAKKRETISGATVPMVKAAVAARVPGFNVYTR 116
            F A++ G    V GA+NP+PEL + MQ    R   + A   QR LD+W + R       +P+VKAA+ AR+  F V+ R
Sbjct:   97 FEALQKGLSGSVTGAANPMPELLIAMQVEY-RLSASKAQSMQRCLDIWNRFRNDSGYFEIPLVKAAMGARIDRFPVHVR 174          
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Match: A0A257NHK0_9GAMM (Dihydrodipicolinate synthase n=1 Tax=Methylococcaceae bacterium NSO1 TaxID=1917483 RepID=A0A257NHK0_9GAMM)

HSP 1 Score: 57.4 bits (137), Expect = 2.900e-7
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   41 MKAGADACVVGASNPLPELAVRMQACLDRGDTNGAGQAQRRLDVWAKKRETISGATVPMVKAAVAARVPGFNVYTR 116
            ++ G    V G +NPLPEL + +QA       N A   QR LDVW + RET     +P+VKAA+ AR+  F ++ R
Sbjct:  195 LQKGLSGSVTGGANPLPELLIAIQADFQISG-NKAQSMQRSLDVWNEFRETSGYFEIPLVKAAMGARIADFPLHVR 269          
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Match: UPI001F49025D (dihydrodipicolinate synthase family protein n=1 Tax=Methylomarinum vadi TaxID=438855 RepID=UPI001F49025D)

HSP 1 Score: 55.5 bits (132), Expect = 1.510e-6
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 0
Query:   38 FLAMKAGADACVVGASNPLPELAVRMQACLDRGDTNGAGQAQRRLDVWAKKRETISGATVPMVKAAVAARVPGFNVYTR 116
            F  ++ G    V GA+NPLPEL + +QA   R     A   QR LD W   R+      +P+VKAA+ AR+ GF  + R
Sbjct:  264 FEVLQKGLTGSVTGAANPLPELLITLQAEF-RSCPAKAQSIQRCLDTWNAFRQASGHPEIPLVKAAMGARIAGFPPHVR 341          
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Match: UPI00192265A3 (dihydrodipicolinate synthase family protein n=1 Tax=Methylomicrobium sp. RS1 TaxID=2802053 RepID=UPI00192265A3)

HSP 1 Score: 53.1 bits (126), Expect = 8.890e-6
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 0
Query:   38 FLAMKAGADACVVGASNPLPELAVRMQ-ACLDRGDTNGAGQAQRRLDVWAKKRETISGATVPMVKAAVAARVPGFNVYTR 116
              A++ G    V G +NPLP+  + +Q A ++R D + A QA   LD W   R T +   +P+VKAA+ AR+ GF  Y R
Sbjct:  190 LAALQNGLHGSVTGGANPLPDYLLAIQKAWINRSDKSLALQAA--LDAWNAFRSTSALTEIPLVKAAMGARIAGFPPYVR 267          
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Match: UPI0012F94E86 (dihydrodipicolinate synthase family protein n=1 Tax=Methylosarcina fibrata TaxID=105972 RepID=UPI0012F94E86)

HSP 1 Score: 50.4 bits (119), Expect = 8.030e-5
Identity = 29/84 (34.52%), Postives = 45/84 (53.57%), Query Frame = 0
Query:   34 EVDGFLAMKAGADACVVGASNPLPELAVRMQACLDRGDTNGAGQA-QRRLDVWAKKRETISGATVPMVKAAVAARVPGFNVYTR 116
            + +   A++AG    V G +NPLPE  + ++     G  +G  QA QR  +VW   R   S   +P+VKAA+ AR+  F ++ R
Sbjct:  188 DFEALAALQAGLTGSVSGGANPLPEFLLAVRKYF--GAADGKAQALQRAFNVWNDYRTGSSFPEIPLVKAAMGARLADFPIHVR 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25870.7053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FYB6_ECTSI1.100e-1666.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2N1ZRH3_9GAMM2.670e-739.24Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A257NHK0_9GAMM2.900e-740.79Dihydrodipicolinate synthase n=1 Tax=Methylococcac... [more]
UPI001F49025D1.510e-639.24dihydrodipicolinate synthase family protein n=1 Ta... [more]
UPI00192265A38.890e-638.75dihydrodipicolinate synthase family protein n=1 Ta... [more]
UPI0012F94E868.030e-534.52dihydrodipicolinate synthase family protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 2..113
e-value: 3.6E-8
score: 34.4
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 40..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25870contigH-paniculata_contig25870:710..2974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25870.7053.1mRNA_H-paniculata_contig25870.7053.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25870 710..3001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25870.7053.1 ID=prot_H-paniculata_contig25870.7053.1|Name=mRNA_H-paniculata_contig25870.7053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MALKEALPACQLLVSGERRIPPAEGVGHGDGIKEVDGFLAMKAGADACVV
GASNPLPELAVRMQACLDRGDTNGAGQAQRRLDVWAKKRETISGATVPMV
KAAVAARVPGFNVYTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM