mRNA_H-paniculata_contig25613.6976.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: D8LNK5_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK5_ECTSI) HSP 1 Score: 290 bits (743), Expect = 1.110e-90 Identity = 150/213 (70.42%), Postives = 168/213 (78.87%), Query Frame = 1
Query: 31 PATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPP--SFSPGDKRIASRHQEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMVGGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCTS 663
PA SPTSL++V T NYTRLVL+NPK EPARGGSFVYISVP ALGTDEAHAM+VALRG+PP SF + S QEE FTLY+KDLGPWT ALR A DP +LLVDVDGFY+ V SFNTMM GA R+V++AGGSG TS+MGFIQDWCV A+AGS VP VH WCCR+M EM+LVGES+PSMLASAGSKK SHFT+SLYCTS
Sbjct: 319 PAESPSPTSLLDVHTTENYTRLVLKNPKCDEPARGGSFVYISVPGALGTDEAHAMSVALRGSPPPSSFKTSVAPL-SVPQEEIFTLYVKDLGPWTKALRRAAGNVA---DPGALLVDVDGFYSQVASFNTMMKRGASRVVIIAGGSGVTSVMGFIQDWCVVAAAGSVVPEVHLAWCCRTMVEMQLVGESIPSMLASAGSKKGSHFTLSLYCTS 527
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: D7FK19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK19_ECTSI) HSP 1 Score: 279 bits (714), Expect = 9.790e-88 Identity = 145/222 (65.32%), Postives = 168/222 (75.68%), Query Frame = 1
Query: 31 PATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPPS------FSPGDKRIASRHQEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKS-LLVDVDGFYTHVTSFNTMMVGGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCTSSKVW 675
P TKASPTSLV+ T NYTRLVLRNPK ARGGSFVYIS P ALGTDEAHA+TVALRGAPPS +P +E+ FT+YIKDLGPWT AL+ A GA + +P S LLVDVDGFYT V SFN+MM+GGA R+V+V GGSG TS+ GFIQDWCVAA+ G++VP VH WCCR++ EMELVGE+LPS+LA AG KD+HF+MSLYC S K W
Sbjct: 372 PETKASPTSLVSAYTNENYTRLVLRNPKKAS-ARGGSFVYISAPGALGTDEAHAITVALRGAPPSPPSSAKVAPSSDSAVPPREEDVFTVYIKDLGPWTKALKLTAEGAITARNPASALLVDVDGFYTQVNSFNSMMIGGAPRVVIVTGGSGMTSVFGFIQDWCVAAAEGASVPEVHMAWCCRTLSEMELVGEALPSLLAGAGRAKDTHFSMSLYC-SGKGW 591
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: D7FGP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGP2_ECTSI) HSP 1 Score: 274 bits (700), Expect = 5.320e-85 Identity = 147/222 (66.22%), Postives = 168/222 (75.68%), Query Frame = 1
Query: 49 PTSLVNVRTISNYTRLVLRNPKSY-------EPARGGSFVYISVPAALGTDEAHAMTVALRGAPPSFSPGDKRIASRH------QEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMV-GGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCTSSKV 672
PTSLV+V T NYTRLVLRNPK+ ARGGSFVYISVPAALGTDEAHA+TVALRGAPPSFS K + R+ + + FT+YIKDLG WT L+ A GAE + D +SLLVDVDGFYT V SF++M V GG R++VVAGGSG TSLMGFIQDW VAA G+ VP V+ WCCR M EMELVGE LPS+LASAGSKKD+HF+MSLYC+SSK
Sbjct: 230 PTSLVSVATNDNYTRLVLRNPKTGGVGDSGDRSARGGSFVYISVPAALGTDEAHAITVALRGAPPSFSHAAKLSSGRNSAAQEDENDVFTVYIKDLGKWTKTLKDTARGAEAAGDARSLLVDVDGFYTQVQSFSSMKVAGGTSRVMVVAGGSGMTSLMGFIQDWAVAAREGADVPEVNLAWCCRYMSEMELVGECLPSVLASAGSKKDTHFSMSLYCSSSKA 451
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: D7G5Y8_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G5Y8_ECTSI) HSP 1 Score: 274 bits (700), Expect = 1.230e-83 Identity = 147/222 (66.22%), Postives = 168/222 (75.68%), Query Frame = 1
Query: 49 PTSLVNVRTISNYTRLVLRNPKSY-------EPARGGSFVYISVPAALGTDEAHAMTVALRGAPPSFSPGDKRIASRH------QEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMV-GGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCTSSKV 672
PTSLV+V T NYTRLVLRNPK+ ARGGSFVYISVPAALGTDEAHA+TVALRGAPPSFS K + R+ + + FT+YIKDLG WT L+ A GAE + D +SLLVDVDGFYT V SF++M V GG R++VVAGGSG TSLMGFIQDW VAA G+ VP V+ WCCR M EMELVGE LPS+LASAGSKKD+HF+MSLYC+SSK
Sbjct: 388 PTSLVSVATNDNYTRLVLRNPKTGGVGDSGDRSARGGSFVYISVPAALGTDEAHAITVALRGAPPSFSHAAKLSSGRNSAAQEDENDVFTVYIKDLGKWTKTLKDTARGAEAAGDARSLLVDVDGFYTQVQSFSSMKVAGGTSRVMVVAGGSGMTSLMGFIQDWAVAAREGADVPEVNLAWCCRYMSEMELVGECLPSVLASAGSKKDTHFSMSLYCSSSKA 609
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: D7G8Y6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y6_ECTSI) HSP 1 Score: 204 bits (520), Expect = 1.030e-58 Identity = 115/211 (54.50%), Postives = 134/211 (63.51%), Query Frame = 1
Query: 49 PTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPPSFSPGDKRIASRHQEE--FFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMV-GGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCTSSKV 672
PTSLV+V T NYTRLVLRNPK+ G +R R ++E FT+YIKDLG WT L+ A GAE + D +SLLVDVDGFYT V SF++M V GG R++VVAGGSG TSLMGFIQDW VAA G+ VP V+ WCCR M EMELVGE LPS+LASAGSKKD+HF+MSLYC+SSK
Sbjct: 257 PTSLVSVATNDNYTRLVLRNPKT---------------------------------------GRRRGQRRQEDENDVFTVYIKDLGKWTKTLKDTARGAEAAGDARSLLVDVDGFYTQVQSFSSMKVAGGTSRVMVVAGGSGMTSLMGFIQDWAVAAREGADVPEVNLAWCCRYMSEMELVGECLPSVLASAGSKKDTHFSMSLYCSSSKA 428
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: A0A6H5KAK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK2_9PHAE) HSP 1 Score: 198 bits (503), Expect = 6.920e-58 Identity = 105/167 (62.87%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 13 WNRWWSPATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPP------SFSPGDKRIASRHQEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKS-LLVDVDGFYTHVTSFNTMMVGGAGRIVVVAGGSGATSLMGFIQ 492
W RW+ P TKASPTSLV+ T NYTRLVLRNPK ARGGSFVYIS P ALGTDEAHA+TVALRG PP +P + +E+ FT+YIKDLGPWT AL+ A GA + P S LLVDVDGFYT V SFN+MM+GGA R+V+V GGSG TS+ GFIQ
Sbjct: 267 WKRWFKPETKASPTSLVSAYTNENYTRLVLRNPKKAS-ARGGSFVYISAPGALGTDEAHAITVALRGPPPCPPSSAKVAPSSESAEPPREEDVFTVYIKDLGPWTKALKLTAEGAITARSPASALLVDVDGFYTQVDSFNSMMIGGAPRVVIVTGGSGMTSVFGFIQ 432
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: A0A6H5KRK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK1_9PHAE) HSP 1 Score: 187 bits (474), Expect = 2.130e-51 Identity = 109/225 (48.44%), Postives = 136/225 (60.44%), Query Frame = 1
Query: 13 WNRWWS---------PATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPPSFSPGDKRIASRHQEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMVGGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCT 660
WN WWS A +LV++ YTRLVLRNP ++ PA+GG+FVYISVPA LGT EAH M+VALRGAPP + + FTLY+K +G WT AL+ + SDD L V VDG Y S +M G R+V+ AGGSG TS IQDWC A S G VPAVH VW CRSM E+EL+GE++PS LA+A + +S F MS++C+
Sbjct: 345 WN-WWSVLRQCFCKSSARGCGGCALVHLEAGDGYTRLVLRNPSNHSPAKGGAFVYISVPALLGTIEAHPMSVALRGAPPHL------WNAAFDDGVFTLYVKTMGSWTLALQK-----QESDD---LTVHVDGLYGGAPSLASMKQAGFPRVVLFAGGSGVTSFTTLIQDWCEAYSGGEDVPAVHLVWSCRSMSEIELLGEAIPSFLAAAPAGAESLFNMSMFCS 554
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: D7G4X0_ECTSI (Ferric chelate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X0_ECTSI) HSP 1 Score: 184 bits (467), Expect = 3.440e-51 Identity = 106/225 (47.11%), Postives = 132/225 (58.67%), Query Frame = 1
Query: 13 WNRWWS---------PATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPPSFSPGDKRIASRHQEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMVGGAGRIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLASAGSKKDSHFTMSLYCT 660
WN WWS A +LV++ YTRLVLRNP ++ PA+GG+FVYISVPA LGT EAH M+VALRGAPP + FTLYIK +G WT AL+ + +L V VDG Y S +M G ++V+ AGGSG TS IQDWC A S G VPAVH VW CR M E+EL+GE+LPS LA+A + +S F MS++C+
Sbjct: 191 WN-WWSVLRQCFCKSSARGCGDCALVHLEAGDGYTRLVLRNPSNHSPAKGGTFVYISVPALLGTIEAHPMSVALRGAPPHLWNASL------DDGVFTLYIKTMGSWTLALQK--------QESDNLTVHVDGLYGGAPSLASMKQAGFPKVVLFAGGSGVTSFTALIQDWCEAYSGGEDVPAVHLVWSCRRMSEIELLGEALPSFLAAAAAGAESLFKMSMFCS 400
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: A0A835YW60_9STRA (Ferric oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW60_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.120e-23 Identity = 77/210 (36.67%), Postives = 106/210 (50.48%), Query Frame = 1
Query: 1 RWRYWNRWWSPATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAAL--GTDEAHAMTVALRGAPPSFSPGDKRIASRHQEEFFTLYIKDLGPWTGALRSVANGAEVSDDPKSLLVDVDGFYTHVTSFNTMMVGGAG-----RIVVVAGGSGATSLMGFIQDWCVAASAGSAVPAVHFVWCCRSMQEMELVGESLPSMLA 609
RWR W RW PA + S S V ++ TR KS P GGSFVY+SVP A+ G +EAHA+TVALRGAPP+ + + + YIKD G W+GA+ +A ++ DP++L+VD DG Y + T+ G A R+++VAG VH VW CR++QE+ VG ++PS A
Sbjct: 403 RWRLWQRWTGPAAERS--SSAPVAEGASKTR------KS--PVHGGSFVYMSVPGAMAQGANEAHAITVALRGAPPA-------VPGCGAADRCSFYIKDSGAWSGAVVRMAG--QMGLDPQALIVDTDGPYIRCATMLTLSCGAAASGTPPRVLLVAG-------------------------EVHLVWVCRNIQELTFVGAAIPSFTA 568
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Match: A0A6H5JBW2_9PHAE (Ferric oxidoreductase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW2_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.320e-22 Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 1
Query: 4 WRYWNRWWSPATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYISVPAALGTDEAHAMTVALRGAPP 222
WRYWNR PA ASPTSL++V T N T LVL++P EPARGGSFVYISVP LGTD+ +AMTV+LRG+PP
Sbjct: 92 WRYWNRCLKPADSASPTSLLDVHTTENCTCLVLKSPTCDEPARGGSFVYISVPGGLGTDKVYAMTVSLRGSPP 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25613.6976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25613.6976.1 >prot_H-paniculata_contig25613.6976.1 ID=prot_H-paniculata_contig25613.6976.1|Name=mRNA_H-paniculata_contig25613.6976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp RWRYWNRWWSPATKASPTSLVNVRTISNYTRLVLRNPKSYEPARGGSFVYback to top mRNA from alignment at H-paniculata_contig25613:2005..3221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25613.6976.1 ID=mRNA_H-paniculata_contig25613.6976.1|Name=mRNA_H-paniculata_contig25613.6976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1217bp|location=Sequence derived from alignment at H-paniculata_contig25613:2005..3221- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25613:2005..3221- >mRNA_H-paniculata_contig25613.6976.1 ID=mRNA_H-paniculata_contig25613.6976.1|Name=mRNA_H-paniculata_contig25613.6976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig25613:2005..3221- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |