prot_H-paniculata_contig25378.6912.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25378.6912.1
Unique Nameprot_H-paniculata_contig25378.6912.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
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BLAST of mRNA_H-paniculata_contig25378.6912.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.970e-10
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:   61 RSLCMDAFNIVLTKSCSKRGGYLPIKTFQLVSLEMCMMCRNFSTLHVRVAIDTPRRLWATSADQPSP 127
            RS C+    + L ++C  +  Y   K  QL SLE+CM CR++ TLH+ V   TPRRL A +AD PSP
Sbjct:  133 RSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLA-AADAPSP 198
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BLAST of mRNA_H-paniculata_contig25378.6912.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 8.080e-9
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:   61 RSLCMDAFNIVLTKSCSKRGGYLPIKTFQLVSLEMCMMCRNFSTLHVRVAIDTPRRLWATSADQPSP 127
            RS C++A  I L ++C+    Y   K  QL SLE C+ CRN+ TLH++V    PRRL A  AD P P
Sbjct:  110 RSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLAR-ADAPPP 175
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25378.6912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE9.970e-1046.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI8.080e-946.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25378contigH-paniculata_contig25378:1210..2960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25378.6912.1mRNA_H-paniculata_contig25378.6912.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25378 1209..2960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25378.6912.1 ID=prot_H-paniculata_contig25378.6912.1|Name=mRNA_H-paniculata_contig25378.6912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
GLYGQSRCCSKSALYGLSSSQPLIRRCAYMGCTACSTMYPVGWKAAAAGI
FQDEVDRQSGRSLCMDAFNIVLTKSCSKRGGYLPIKTFQLVSLEMCMMCR
NFSTLHVRVAIDTPRRLWATSADQPSPS
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