mRNA_H-paniculata_contig25367.6906.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 84.7 bits (208), Expect = 2.040e-17 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 28 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIA 282
W EA+ E + +E WT V N+ KG +SA+W+F K+DE+GNV + ARLVARG+SQ+ +D+ E FAP V +V+ ++A
Sbjct: 189 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLA 273
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 84.7 bits (208), Expect = 4.220e-17 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 28 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIA 282
W EA+ E + +E WT V N+ KG +SA+W+F K+DE+GNV + ARLVARG+SQ+ +D+ E FAP V +V+ ++A
Sbjct: 564 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLA 648
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI) HSP 1 Score: 80.1 bits (196), Expect = 1.820e-15 Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 28 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVI 279
W EA++VE + L+N WT VD + ++A+WVF K D GNV+K ARLVARGF+Q H +D+ + + P V+ +S+++VI
Sbjct: 878 WEEAIKVELDSLDNTGTWTIVD-LPAARKAITAKWVFKTKQDADGNVSKYKARLVARGFTQMHGIDYHDTYLPVVSMTSLRLVI 960
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A6H5L9Z3_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Z3_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 6.340e-15 Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 34 EAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 288
EA+R EFEG + +++VD +GST VS++W F+WKI+++G + K RLVARGFSQ NVD +P +++S+K++ AVA
Sbjct: 1007 EAMREEFEGHLGTRTFSFVDGTPEGSTPVSSKWCFSWKINKEGKIEKFKERLVARGFSQIPNVDHFHSSSPCPSSASIKLMFAVA 1091
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: Q69FA4_PHAVU (Gag-pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=Q69FA4_PHAVU) HSP 1 Score: 76.6 bits (187), Expect = 2.990e-14 Identity = 33/87 (37.93%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 28 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 288
W +A++ E E ++ WT VD + KG+ + +W+F K G++ K ARLVA+GF+Q+HN+D+ + FAP SS+++++A+A
Sbjct: 784 WDKAIKTELESIKKNNTWTLVD-LPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSIRVLLALA 869
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A6H5JNP9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP9_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.190e-13 Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 19 KTMWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 288
K W A++ E +G + +T V + +G + ++WVF+WK +E+G + AR+VARGFSQ H +DF F+ +A+S+K VIAVA
Sbjct: 120 KVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIHGIDFHHSFSACPSAASIKTVIAVA 209
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A535F797_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F797_9CHLR) HSP 1 Score: 74.7 bits (182), Expect = 1.420e-13 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 19 KTMWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 288
K W A+ E + + W VD KG +VS++WVF K G + + ARLVARGFSQQH +D+ E FAP V S+++++A+A
Sbjct: 827 KRQWSAAINEELQSIATNTVWELVDTP-KGVNIVSSKWVFKLKCLPDGRIDRYKARLVARGFSQQHGIDYYETFAPVVRLESLRILLAIA 915
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: UPI001C3499C3 (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001C3499C3) HSP 1 Score: 73.9 bits (180), Expect = 2.520e-13 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 19 KTMWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIA 282
K W AV+ E + E+ AW VD +KG TVV +WV K+D N+ + ARLVA+G+ Q+ NVD++E F+P V S+++++ A
Sbjct: 160 KENWLLAVKEELQSFEDSNAWELVDKPKKGETVVKCKWVLRKKLDNDNNI-RYRARLVAKGYMQKQNVDYVETFSPVVRHSTLRLLFA 246
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A438JE14_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JE14_VITVI) HSP 1 Score: 73.2 bits (178), Expect = 4.940e-13 Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 4 KKLTHKTMWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 288
++ + W A+ +E E +E W D + +G + +WVF K++E G V K ARL+A+G++QQH +D+ EVFAP +++MVIA+A
Sbjct: 778 EEAVQSSKWRAAMDLEIEAIERNGTWELTD-LPEGVKKIGVKWVFKTKLNENGKVDKCKARLLAKGYAQQHGIDYTEVFAPVAKWDTIRMVIALA 871
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY) HSP 1 Score: 73.2 bits (178), Expect = 4.960e-13 Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 4 KKLTHKTMWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 288
KK W A++ E + L+ W ++ G+ VV ++WV K D G + K ARLVARGF+Q H VD+ E FAP SS++ + A+A
Sbjct: 1018 KKRPDWPKWQAAIQAELDSLKANGTWELIERPTDGTNVVDSKWVLHVKKDSAGEIDKYKARLVARGFTQVHGVDYTETFAPVARLSSIRTIFAIA 1112 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25367.6906.1 >prot_H-paniculata_contig25367.6906.1 ID=prot_H-paniculata_contig25367.6906.1|Name=mRNA_H-paniculata_contig25367.6906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp MWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKback to top mRNA from alignment at H-paniculata_contig25367:12..299- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25367.6906.1 ID=mRNA_H-paniculata_contig25367.6906.1|Name=mRNA_H-paniculata_contig25367.6906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=288bp|location=Sequence derived from alignment at H-paniculata_contig25367:12..299- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25367:12..299- >mRNA_H-paniculata_contig25367.6906.1 ID=mRNA_H-paniculata_contig25367.6906.1|Name=mRNA_H-paniculata_contig25367.6906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at H-paniculata_contig25367:12..299- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |