mRNA_H-paniculata_contig25332.6896.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A4Y2J406_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2J406_ARAVE) HSP 1 Score: 85.1 bits (209), Expect = 7.780e-18 Identity = 41/114 (35.96%), Postives = 70/114 (61.40%), Query Frame = 3
Query: 165 EMARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 506
E AR+ + + + WAEAV++A+Y R PT P+E T + S +HLR+FG AY R+K++ K+ + +GY+++S +YR ++P K++++SRNV+F+EE
Sbjct: 6 ESARSMIYSKELPSYLWAEAVKTAIYIWNRTPTSQAPDSTPHELWTGKSTSLNHLRIFGSEAYMYVPDNLRKKLEPKSKKVIFVGYEKESKNYRLFDPVAKTIKVSRNVVFNEE 119
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A6A3BK46_HIBSY (Annexin 5 isoform 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BK46_HIBSY) HSP 1 Score: 86.3 bits (212), Expect = 1.830e-16 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 3
Query: 165 EMARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 506
+MAR+ + + + +W +AV AVY R+PTR G P E + R HLR+F A+ ++R K+D+K + + +GYD +S Y+ YNP+NK + +SR+V+F+EE
Sbjct: 1069 DMARSMLKSMKLPKEFWVKAVAYAVYLTNRSPTRSVWGKTPQEAWSERKPDISHLRIFESIAHVHVPDERRTKLDEKRESFIFIGYDANSKGYKLYNPDNKKIVISRDVVFNEE 1182
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A1X7U495_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U495_AMPQE) HSP 1 Score: 85.5 bits (210), Expect = 3.240e-16 Identity = 46/113 (40.71%), Postives = 63/113 (55.75%), Query Frame = 3
Query: 165 EMARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 503
E RA + ++ + HR+WAEA+ +AVY R+ T+ P+E R S HLRVFG TAY +R K+D KA + LGY + YR Y+ + V SR+VIFDE
Sbjct: 615 EAVRAMLSSSTLPHRFWAEALSTAVYLKNRSYTKAVINMTPHEAWNGRRPSVKHLRVFGCTAYSHIPKDERSKLDPKARRCILLGYSNTTKGYRLYDTKRDRVFYSRDVIFDE 727
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A7S1T3E5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3E5_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 5.150e-16 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 3
Query: 264 RLHS---GGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 503
R+HS GG+P+ T R +RVFG AY QRRK+DD+AW GV +GY +SP++ YNP + SRNV+FDE
Sbjct: 9 RVHSSGAGGVPFTLATGRRADLSSMRVFGCPAYVHVDKSQRRKLDDRAWKGVFVGYASESPAWLVYNPVTRRAVSSRNVVFDE 91
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2K3K2Q6_TRIPR (Cysteine-rich receptor-like protein kinase 25-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K2Q6_TRIPR) HSP 1 Score: 79.0 bits (193), Expect = 7.050e-16 Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 3
Query: 189 AANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 503
A N+ R+W EAV+ A Y + +PT P E + R S H +VFG A+ QR+K+DDK+ V LG E+S +Y+ Y+P K + +SR+VIF+E
Sbjct: 4 ARNVPKRFWPEAVKWATYVMNMSPTLSVKDMTPEEAWSGRKPSVHHFKVFGCVAHVHIHDSQRKKLDDKSKKCVLLGVSEESKAYKLYDPIEKKIIISRDVIFEE 108
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2K3KT00_TRIPR (Equilibrative nucleoside transporter 3-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KT00_TRIPR) HSP 1 Score: 80.1 bits (196), Expect = 8.920e-16 Identity = 41/112 (36.61%), Postives = 66/112 (58.93%), Query Frame = 3
Query: 168 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 503
MAR+ + NM H++W EAV +AV+ + R+PT+ P+E T S H R+FG ++ Q RRK+DD++ + LGY + +Y+ Y P++ V +SR++ FDE
Sbjct: 3 MARSMLKGKNMPHKFWGEAVSTAVHIINRSPTKKLKEKTPHEAWTGLKPSVSHFRIFGSLSFRHVPDQVRRKLDDRSQPMILLGYHA-TGAYKLYAPKDNKVVISRDIKFDE 113
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A0J7KRH5_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KRH5_LASNI) HSP 1 Score: 83.2 bits (204), Expect = 1.420e-15 Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 3
Query: 165 EMARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 506
E AR ++A + R WAEAV +AVY L R T G PYE R S LR+FG Y ++R+K D KA AG+ +GY + + YR + E K +++ RNV+F E
Sbjct: 35 EAARTMILAKGLDKRLWAEAVNAAVYTLNRTGTSSVQGKTPYEIWFGRLASNIKLRIFGTKTYTHIPKEKRKKWDQKAKAGILVGYGDSTKEYRIWFEERKKIEIHRNVVFANE 148
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2K3JMR9_TRIPR (Cysteine-rich receptor-like protein kinase 25-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JMR9_TRIPR) HSP 1 Score: 79.3 bits (194), Expect = 2.290e-15 Identity = 40/113 (35.40%), Postives = 64/113 (56.64%), Query Frame = 3
Query: 168 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 506
M R+ + ++ ++W EA+ A Y L R+PT P E + + + H RVFG AY R+K+DDK+ + LG E+S +Y+ Y+P NK V +SR+V+F+E+
Sbjct: 1 MIRSLLSGKSVPKKFWPEALNWATYILNRSPTLSVKDMTPQEAWSGKKPNVQHFRVFGCLAYMHVPDNHRKKLDDKSLKCILLGISEESKAYKLYDPTNKKVIISRDVVFEED 113
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A8J5LUA7_ZINOF (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LUA7_ZINOF) HSP 1 Score: 82.4 bits (202), Expect = 3.300e-15 Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 3
Query: 168 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 503
MAR+ + +M R+W EAVR AVY L R PT+ P+E R HL+VFG AY + +K+DD++ V LG +E +YR ++P + +Q+SR+VIF E
Sbjct: 3 MARSLLKGTHMPARFWGEAVRHAVYLLNRLPTKALGERTPFEAWMGRKPHLAHLKVFGCIAYAKNTTPHLKKLDDRSSPMVYLGVEEGCKAYRLFDPRHNKLQVSRDVIFQE 114
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2Z6MGY8_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MGY8_TRISU) HSP 1 Score: 82.4 bits (202), Expect = 3.860e-15 Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = 3
Query: 168 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 503
M R + ++ W EAV + Y L PT+ +G P E + S HLRVFG AY+ Q RRK+DDKA + +GY + Y+ Y+P NK+V +SRNV+FDE
Sbjct: 562 MVRCMLKGKHLPKELWGEAVATTTYILNLCPTKRLNGITPEECWSKNKPSVKHLRVFGSIAYNHVSDQLRRKLDDKATTMILVGY-HSTGGYKLYDPVNKNVVVSRNVVFDE 672 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25332.6896.1 >prot_H-paniculata_contig25332.6896.1 ID=prot_H-paniculata_contig25332.6896.1|Name=mRNA_H-paniculata_contig25332.6896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSback to top mRNA from alignment at H-paniculata_contig25332:210..724- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25332.6896.1 ID=mRNA_H-paniculata_contig25332.6896.1|Name=mRNA_H-paniculata_contig25332.6896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=515bp|location=Sequence derived from alignment at H-paniculata_contig25332:210..724- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25332:210..724- >mRNA_H-paniculata_contig25332.6896.1 ID=mRNA_H-paniculata_contig25332.6896.1|Name=mRNA_H-paniculata_contig25332.6896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at H-paniculata_contig25332:210..724- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |