prot_H-paniculata_contig25332.6896.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25332.6896.1
Unique Nameprot_H-paniculata_contig25332.6896.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A4Y2J406_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2J406_ARAVE)

HSP 1 Score: 82.8 bits (203), Expect = 1.050e-17
Identity = 38/98 (38.78%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   16 WAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 113
            WAEAV++A+Y   R PT       P+E  T +  S +HLR+FG  AY       R+K++ K+   + +GY+++S +YR ++P  K++++SRNV+F+EE
Sbjct:   22 WAEAVKTAIYIWNRTPTSQAPDSTPHELWTGKSTSLNHLRIFGSEAYMYVPDNLRKKLEPKSKKVIFVGYEKESKNYRLFDPVAKTIKVSRNVVFNEE 119          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A7S1T3E5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3E5_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 9.270e-17
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   33 RLHS---GGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 112
            R+HS   GG+P+   T R      +RVFG  AY      QRRK+DD+AW GV +GY  +SP++  YNP  +    SRNV+FDE
Sbjct:    9 RVHSSGAGGVPFTLATGRRADLSSMRVFGCPAYVHVDKSQRRKLDDRAWKGVFVGYASESPAWLVYNPVTRRAVSSRNVVFDE 91          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A6A3BK46_HIBSY (Annexin 5 isoform 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BK46_HIBSY)

HSP 1 Score: 84.7 bits (208), Expect = 9.450e-17
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    1 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 113
            MAR+ + +  +   +W +AV  AVY   R+PTR   G  P E  + R     HLR+F   A+     ++R K+D+K  + + +GYD +S  Y+ YNP+NK + +SR+V+F+EE
Sbjct: 1070 MARSMLKSMKLPKEFWVKAVAYAVYLTNRSPTRSVWGKTPQEAWSERKPDISHLRIFESIAHVHVPDERRTKLDEKRESFIFIGYDANSKGYKLYNPDNKKIVISRDVVFNEE 1182          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A1X7U495_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U495_AMPQE)

HSP 1 Score: 83.6 bits (205), Expect = 2.340e-16
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    3 RANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 112
            RA + ++ + HR+WAEA+ +AVY   R+ T+      P+E    R  S  HLRVFG TAY      +R K+D KA   + LGY   +  YR Y+ +   V  SR+VIFDE
Sbjct:  618 RAMLSSSTLPHRFWAEALSTAVYLKNRSYTKAVINMTPHEAWNGRRPSVKHLRVFGCTAYSHIPKDERSKLDPKARRCILLGYSNTTKGYRLYDTKRDRVFYSRDVIFDE 727          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2K3K2Q6_TRIPR (Cysteine-rich receptor-like protein kinase 25-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K2Q6_TRIPR)

HSP 1 Score: 78.2 bits (191), Expect = 2.540e-16
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 0
Query:    8 AANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 112
            A N+  R+W EAV+ A Y +  +PT       P E  + R  S  H +VFG  A+      QR+K+DDK+   V LG  E+S +Y+ Y+P  K + +SR+VIF+E
Sbjct:    4 ARNVPKRFWPEAVKWATYVMNMSPTLSVKDMTPEEAWSGRKPSVHHFKVFGCVAHVHIHDSQRKKLDDKSKKCVLLGVSEESKAYKLYDPIEKKIIISRDVIFEE 108          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2K3KT00_TRIPR (Equilibrative nucleoside transporter 3-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KT00_TRIPR)

HSP 1 Score: 79.3 bits (194), Expect = 3.150e-16
Identity = 41/112 (36.61%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    1 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 112
            MAR+ +   NM H++W EAV +AV+ + R+PT+      P+E  T    S  H R+FG  ++     Q RRK+DD++   + LGY   + +Y+ Y P++  V +SR++ FDE
Sbjct:    3 MARSMLKGKNMPHKFWGEAVSTAVHIINRSPTKKLKEKTPHEAWTGLKPSVSHFRIFGSLSFRHVPDQVRRKLDDRSQPMILLGYHA-TGAYKLYAPKDNKVVISRDIKFDE 113          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2K3JMR9_TRIPR (Cysteine-rich receptor-like protein kinase 25-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JMR9_TRIPR)

HSP 1 Score: 78.6 bits (192), Expect = 8.110e-16
Identity = 40/113 (35.40%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    1 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDEE 113
            M R+ +   ++  ++W EA+  A Y L R+PT       P E  + +  +  H RVFG  AY       R+K+DDK+   + LG  E+S +Y+ Y+P NK V +SR+V+F+E+
Sbjct:    1 MIRSLLSGKSVPKKFWPEALNWATYILNRSPTLSVKDMTPQEAWSGKKPNVQHFRVFGCLAYMHVPDNHRKKLDDKSLKCILLGISEESKAYKLYDPTNKKVIISRDVVFEED 113          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A8J5LUA7_ZINOF (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LUA7_ZINOF)

HSP 1 Score: 81.6 bits (200), Expect = 1.020e-15
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 0
Query:    1 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 112
            MAR+ +   +M  R+W EAVR AVY L R PT+      P+E    R     HL+VFG  AY    +   +K+DD++   V LG +E   +YR ++P +  +Q+SR+VIF E
Sbjct:    3 MARSLLKGTHMPARFWGEAVRHAVYLLNRLPTKALGERTPFEAWMGRKPHLAHLKVFGCIAYAKNTTPHLKKLDDRSSPMVYLGVEEGCKAYRLFDPRHNKLQVSRDVIFQE 114          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: A0A2Z6MGY8_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MGY8_TRISU)

HSP 1 Score: 81.6 bits (200), Expect = 1.110e-15
Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = 0
Query:    1 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENKSVQLSRNVIFDE 112
            M R  +   ++    W EAV +  Y L   PT+  +G  P E  +    S  HLRVFG  AY+    Q RRK+DDKA   + +GY   +  Y+ Y+P NK+V +SRNV+FDE
Sbjct:  562 MVRCMLKGKHLPKELWGEAVATTTYILNLCPTKRLNGITPEECWSKNKPSVKHLRVFGSIAYNHVSDQLRRKLDDKATTMILVGY-HSTGGYKLYDPVNKNVVVSRNVVFDE 672          
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Match: W7TMR7_9STRA (Copia ltr rider n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMR7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.520e-15
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    1 MARANMIAANMGHRYWAEAVRSAVYCLTRAPTR-LHSGGMPYENGTVRHQSWDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDE--DSPS-YRTYNPENKSVQLSRNVIFDEEDF 115
            MAR+  I A +G R+WAEA+ +A Y LTR  T  L  G  PY     +H +  H R FG  A+    S  RRK+DD+A  G+ +GYD+  ++P  YR Y P       S +V FDE+ F
Sbjct:    7 MARSLRIQAGLGKRFWAEALNTATYILTRTRTSALGQGETPYFKMFGKHANVKHFRTFGCKAFVHNTSVTRRKLDDRALEGIMIGYDDIGNNPRCYRIYMPSFGKYIRSGHVTFDEDTF 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25332.6896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y2J406_ARAVE1.050e-1738.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A7S1T3E5_9CHLO9.270e-1745.78Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A6A3BK46_HIBSY9.450e-1737.17Annexin 5 isoform 2 n=1 Tax=Hibiscus syriacus TaxI... [more]
A0A1X7U495_AMPQE2.340e-1640.91Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A2K3K2Q6_TRIPR2.540e-1639.05Cysteine-rich receptor-like protein kinase 25-like... [more]
A0A2K3KT00_TRIPR3.150e-1636.61Equilibrative nucleoside transporter 3-like protei... [more]
A0A2K3JMR9_TRIPR8.110e-1635.40Cysteine-rich receptor-like protein kinase 25-like... [more]
A0A8J5LUA7_ZINOF1.020e-1539.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6MGY8_TRISU1.110e-1540.18Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
W7TMR7_9STRA1.520e-1541.18Copia ltr rider n=1 Tax=Nannochloropsis gaditana T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..114
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 9..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25332contigH-paniculata_contig25332:210..557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25332.6896.1mRNA_H-paniculata_contig25332.6896.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25332 210..724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25332.6896.1 ID=prot_H-paniculata_contig25332.6896.1|Name=mRNA_H-paniculata_contig25332.6896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MARANMIAANMGHRYWAEAVRSAVYCLTRAPTRLHSGGMPYENGTVRHQS
WDHLRVFGWTAYDMFQSQQRRKIDDKAWAGVSLGYDEDSPSYRTYNPENK
SVQLSRNVIFDEEDFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like