prot_H-paniculata_contig25244.6879.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25244.6879.1
Unique Nameprot_H-paniculata_contig25244.6879.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD)

HSP 1 Score: 62.4 bits (150), Expect = 3.410e-9
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    3 ELSITYGGQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            +L++ Y     GL ++ YTD+ FG  LD +RS SG V  +   ++ W S +Q +    T+EA+Y+ALSE++K+ +  K
Sbjct: 1186 DLNLIYTKGDAGLRVQGYTDSDFGGDLDKQRSTSGYVFTVGGNTVSWRSSIQPVVALSTTEAEYIALSEAIKEAIWIK 1263          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A4Y2E4X2_ARAVE (Uncharacterized protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2E4X2_ARAVE)

HSP 1 Score: 58.2 bits (139), Expect = 7.990e-9
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    5 SITYGGQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFKAGTRVY 86
            +ITY        +E Y+D  F  C    RS SG V+V  +G+I +HS+   I  + T+EA+ VA SE VK+V+     TR+Y
Sbjct:    4 AITYHATGTSRVLECYSDADFSGCTKTGRSSSGSVIVYARGAISFHSQRLAIVATSTTEAEVVATSEVVKEVLWL---TRLY 82          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5JMR9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR9_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.620e-8
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    3 ELSITYGGQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            EL+  YG    G  ++ Y D  F +    RRSVSGG+V    G++ W SR Q+     T+EA+YVAL + VK+++  +
Sbjct: 1022 ELATEYGVVGEGFSLQRYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 1099          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5LB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB33_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.820e-8
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   14 GLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            GL ++ Y D  F +    RRSVSGG+V    G++ W SR Q+     T+EA+YVAL + VK+++  +
Sbjct:   24 GLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 90          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5KHQ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.920e-8
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    3 ELSITYG---GQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            EL+  YG   G   GL ++ Y D  F +    RRSVSGG+V    G++ W SR Q+     T+EA+YVAL + VK+++  +
Sbjct:  184 ELAAEYGVVGGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 264          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.670e-8
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    4 LSITYGGQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            +S  YGG   G+ +  Y D  F +    RRSVSGG+V    GS+ W SR Q+     T+EA+YVAL + VK+++  +
Sbjct:   63 VSERYGG---GIKLAGYADADFASKAANRRSVSGGIVTCGGGSVSWFSRTQKCVTLSTTEAEYVALGDVVKEIIFLR 136          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.690e-8
Identity = 29/78 (37.18%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    4 LSITY-GGQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            + IT+ GG   G+ M+ + D  + +    RRSVSGG+V+ V G + W SR Q+     T+EA+YVA+++ +K+V+  +
Sbjct:  160 MGITFEGGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLR 237          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.590e-7
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   14 GLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            GL ++ Y D  F +    RRSVSGG+V    G++ W SR Q+     T+EA+YVAL + VK+++  +
Sbjct:  169 GLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 235          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A2K3N065_TRIPR (Copia LTR rider n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N065_TRIPR)

HSP 1 Score: 57.4 bits (137), Expect = 1.960e-7
Identity = 25/75 (33.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    6 ITYGG---QSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVM 77
            + YGG   +     +E Y D+ +  C+D+R+S+SG V  +   +I W + +Q++    T+EA+Y+AL+E+VK+ +
Sbjct: 1150 LIYGGALGEDSKAVIEGYVDSDYAGCMDSRKSISGYVFTMFGTAISWKATLQKVVALSTTEAEYIALTEAVKEAL 1224          
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Match: A0A6H5JI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI51_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.010e-7
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   14 GLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWHSRMQEIPVSGTSEADYVALSESVKDVMLFK 80
            G  ++ Y D  F +    RRSVSGG+V    G++ W SR Q+     T+EA+YVAL + VK+++  +
Sbjct:   24 GFSLQVYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25244.6879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00142E19AD3.410e-937.18uncharacterized protein LOC103874474 n=1 Tax=Brass... [more]
A0A4Y2E4X2_ARAVE7.990e-939.02Uncharacterized protein n=1 Tax=Araneus ventricosu... [more]
A0A6H5JMR9_9PHAE1.620e-838.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5LB33_9PHAE1.820e-840.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHQ3_9PHAE1.920e-839.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KIJ7_9PHAE2.670e-840.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2P8_9PHAE4.690e-837.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLT9_9PHAE1.590e-740.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2K3N065_TRIPR1.960e-733.33Copia LTR rider n=1 Tax=Trifolium pratense TaxID=5... [more]
A0A6H5JI51_9PHAE2.010e-738.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25244contigH-paniculata_contig25244:3172..3468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25244.6879.1mRNA_H-paniculata_contig25244.6879.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25244 2764..3468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25244.6879.1 ID=prot_H-paniculata_contig25244.6879.1|Name=mRNA_H-paniculata_contig25244.6879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MTELSITYGGQSCGLWMEAYTDTGFGACLDARRSVSGGVVVLVKGSIRWH
SRMQEIPVSGTSEADYVALSESVKDVMLFKAGTRVYGAEYDYWRGLSS*
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