prot_H-paniculata_contig25218.6867.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig25218.6867.1
Unique Name	prot_H-paniculata_contig25218.6867.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	149

Homology

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BLAST of mRNA_H-paniculata_contig25218.6867.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 9.460e-67
Identity = 95/148 (64.19%), Postives = 121/148 (81.76%), Query Frame = 0

Query:    1 MGLISGMEPWDQSNPGEDFRFSSSRSTIYVFGLVFVVLFIAWHFARAWLTLPGVYLISGGAEDAKPPGKNLHGIYMVSRVVIVVYCILFTSFLLAEDNGMDYRGALLAWTLSLLACFPHNVSNLWLALNTGIFLHGISSHRLAFLGCK 148
            +G I G+E WD+ N G+DF FS+ RSTI+VFGL+  VL +AWHFARAWLTLPG+ L+SGG +  +PP ++LHGIY  SR+VI+ +CILFTSF+++ED+G DYRGALLAW LSL+A FPH VS +WL +NTGIFL GI ++RL FLGCK
Sbjct:   95 LGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVK-VEPPKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCK 241

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig25218.6867.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig25218.6867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LDF3_ECTSI	9.460e-67	64.19	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..128
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 46..72
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..94
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 129..148
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..27
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..45
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 95..105
None	No IPR available	TMHMM	TMhelix		coord: 28..50
None	No IPR available	TMHMM	TMhelix		coord: 73..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig25218	contig	H-paniculata_contig25218:378..1001 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig25218.6867.1	mRNA_H-paniculata_contig25218.6867.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig25218 359..2459 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig25218.6867.1 ID=prot_H-paniculata_contig25218.6867.1|Name=mRNA_H-paniculata_contig25218.6867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MGLISGMEPWDQSNPGEDFRFSSSRSTIYVFGLVFVVLFIAWHFARAWLT
LPGVYLISGGAEDAKPPGKNLHGIYMVSRVVIVVYCILFTSFLLAEDNGM
DYRGALLAWTLSLLACFPHNVSNLWLALNTGIFLHGISSHRLAFLGCK*