prot_H-paniculata_contig2519.6854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2519.6854.1
Unique Nameprot_H-paniculata_contig2519.6854.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length520
Homology
BLAST of mRNA_H-paniculata_contig2519.6854.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.590e-19
Identity = 78/212 (36.79%), Postives = 103/212 (48.58%), Query Frame = 0
Query:   94 YRRNTEAMSSRPSSYGTGGEEEV---------EVTGSMPLSMSRSRSWSFPLEPHPPIPGSEHSVQ-----GRRGETMGGMAGKMGMEATHPPLSPCRQTSRGFAYSTDEASACLESEMILNCVGSPLKKTPGFWDMRRSSLDRLRRRRDKGLLPAGYGTGRWSNYSTAPVGPKPRR------DPSTAMGRSVSMDRVGNNQVVGGNPARPG 285
            YRR T+ + S+P++   GGE             V+ ++PL +S    +S      P   G   S Q      R    +     + G+  T  P +P    S GFAYSTDE SA +ES MILN V SPLKKTP FW+  R  LDRL RRR++GLLPAGYGTG  +  S+  +  +P R      DP +  G    +D   +       P R G
Sbjct: 1612 YRRLTDTLYSQPTTGNDGGEGTSVTPATSHCPSVSSTLPLELS----FSAVAAQGPVAMGRSRSDQLPKCSSRSSRRLQQSPHQPGVVGTRFPRAP----SGGFAYSTDEDSASMESRMILNYVESPLKKTPEFWEAPRPVLDRLNRRRERGLLPAGYGTGLLTGSSSGAMKVEPGRTRASTADPGSLYGSCGVVDGYDSGMQAAPRPLRAG 1815          
BLAST of mRNA_H-paniculata_contig2519.6854.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 6.550e-14
Identity = 66/161 (40.99%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   94 YRRNTEAMSSRPSSYGTGGEEEVEVTGSM-----------------------PLSMSRSRSWSFPLEPHPPIPGSEHSVQGRRGETMGGMAGKMGMEATHPPLSPCRQTSRGFAYSTDEASACLESEMILNCVGSPLKKTPGFWDMRRSSLDRLRRRRDKG 231
            YRR T+A+SS+PS+ G GG E   VT +                        P++M RSRS   P          + S   RR +     +G +G   T  P +P    S GFAYSTDE SA +ES MILN V SPLKKTP FW+  R  LDRL RRR++G
Sbjct: 1604 YRRLTDALSSQPST-GNGGGEGTSVTPATSHCPSVSSTLPLELIFPAVAAQGPVAMGRSRSDQLP----------KRSSSSRRLQQSPHQSGAVG---TRFPRAP----SGGFAYSTDEDSASMESRMILNYVESPLKKTPEFWEAPRPVLDRLNRRRERG 1746          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2519.6854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPG5_9PHAE3.590e-1936.79P-type phospholipid transporter n=1 Tax=Ectocarpus... [more]
D7FU18_ECTSI6.550e-1440.99Phospholipid-transporting ATPase, putative n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2519contigH-paniculata_contig2519:14238..18050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2519.6854.1mRNA_H-paniculata_contig2519.6854.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2519 14238..18050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2519.6854.1 ID=prot_H-paniculata_contig2519.6854.1|Name=mRNA_H-paniculata_contig2519.6854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=520bp
GNGGDGEGREKPASFLLAAVPNFSGDIDFPDGGRAVQAQGSRGGDQEGPR
VSLEDTHAVGMEVGREREKRGLGPGGEAGGGAVGSGHHTAADAYRRNTEA
MSSRPSSYGTGGEEEVEVTGSMPLSMSRSRSWSFPLEPHPPIPGSEHSVQ
GRRGETMGGMAGKMGMEATHPPLSPCRQTSRGFAYSTDEASACLESEMIL
NCVGSPLKKTPGFWDMRRSSLDRLRRRRDKGLLPAGYGTGRWSNYSTAPV
GPKPRRDPSTAMGRSVSMDRVGNNQVVGGNPARPGRRERVVRREGALVQS
TASDELRRMQSDRAPMPSCANGGGGGGGFGAGPSRRAAVSWGSVFDECDI
TNRPLLALSDGSTCSSAVGTGDCGTPAAILRAINNCPADVESRTTFTKST
SERQAASDTIDESVGGIVSQQSHTRRASHPSRRRSRDDAGCAAGGIPPGE
DDGVPRYGADAVMAPGAGQRSNGMGDDGPVLFAGLMSFDSALQRGGGESG
GSRDVRAYNHGRIKSEGAGG
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