mRNA_H-paniculata_contig2510.6829.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: D8LGL0_ECTSI (CRC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL0_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 4.700e-18 Identity = 46/80 (57.50%), Postives = 52/80 (65.00%), Query Frame = 3
Query: 240 CWLLAGNLVDNDRNA-LERKPNAFQRAEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDR 476
C L +V R A LER P+AF RA L P SV GAGCGC +S CLKKYCVC+ K + CGA CKCEGCLNT +R
Sbjct: 232 CNRLGAVVVQAARRAVLERNPDAFHRAHSLETRPGSVTSGAGCGCTRSHCLKKYCVCFQKSLLCGAGCKCEGCLNTVENR 311
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A7I8KAL5_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KAL5_SPIIN) HSP 1 Score: 74.7 bits (182), Expect = 2.390e-11 Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 3
Query: 246 LLAGNLVDNDRNALERKPNAFQRAEML-------NKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDR 476
+LA + RN L P + +E NK P+S GC C KS+CLKKYC CY GVGC SC+CEGC+NT G R
Sbjct: 407 VLAARKLIESRNPLAFAPKVIRTSEPATEICEDTNKTPASARHKRGCNCKKSRCLKKYCECYQGGVGCSPSCRCEGCMNTFGKR 490
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A7I8JWL9_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JWL9_SPIIN) HSP 1 Score: 74.3 bits (181), Expect = 3.450e-11 Identity = 38/68 (55.88%), Postives = 42/68 (61.76%), Query Frame = 3
Query: 318 EMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFGSSGNKNK 521
E +NK P+S GC C KS CLKKYC CY GVGC ASC+CEGC NT G RR G S N+ K
Sbjct: 577 EDINKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSASCRCEGCKNTFG-RREGVLPMVSEENEPK 643
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: UPI001E6911B0 (protein tesmin/TSO1-like CXC 2 isoform X2 n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E6911B0) HSP 1 Score: 68.6 bits (166), Expect = 5.940e-11 Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 3
Query: 297 PNAFQRAEML---NKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLN 461
P+A E+L NK P+S GC C KS CLKKYC CY GVGC SC+CEGC N
Sbjct: 21 PSADSVTEVLIDPNKTPTSARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKN 78
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A6G1BN41_9ORYZ (CRC domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1BN41_9ORYZ) HSP 1 Score: 70.9 bits (172), Expect = 6.200e-11 Identity = 33/61 (54.10%), Postives = 37/61 (60.66%), Query Frame = 3
Query: 315 AEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIF 497
A+ NK P+S GC C KS CLKKYC CY GVGC SC+CEGC N G RR G +
Sbjct: 100 ADDSNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNAFG-RREGVALI 159
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A0A0L5F3_CUCSA (CRC domain-containing protein n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L5F3_CUCSA) HSP 1 Score: 72.8 bits (177), Expect = 1.120e-10 Identity = 38/82 (46.34%), Postives = 45/82 (54.88%), Query Frame = 3
Query: 276 RNALERKPNAFQRAEML-------NKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFG 500
RN L P + ++ L NK P+S GC C KS CLKKYC CY GVGC SC+CEGC N G R+ G+ I G
Sbjct: 545 RNPLAFAPKVIRNSDSLPEPGDESNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFG-RKDGSSILG 625
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: S8E7R7_9LAMI (CRC domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E7R7_9LAMI) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-10 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 3
Query: 318 EMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHI 494
E +K P+S GC C KS CLKKYC CY GVGC +C+CEGC N G R+ G+H+
Sbjct: 95 EDSSKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSVNCRCEGCRNAFG-RKDGSHV 152
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A0K9QWU5_SPIOL (CRC domain-containing protein n=7 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QWU5_SPIOL) HSP 1 Score: 72.4 bits (176), Expect = 1.480e-10 Identity = 34/57 (59.65%), Postives = 38/57 (66.67%), Query Frame = 3
Query: 318 EMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGA 488
E LNK P+S GC C KS CLKKYC CY GVGC SC+CEGC NT G R+ G+
Sbjct: 549 EELNKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSLSCRCEGCKNTFG-RKEGS 604
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: K7N3J0_SOYBN (CRC domain-containing protein n=6 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7N3J0_SOYBN) HSP 1 Score: 72.4 bits (176), Expect = 1.500e-10 Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 3
Query: 324 LNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPG 470
LNK P+S GC C KS CLKKYC CY GVGC SC+CEGC NT G
Sbjct: 563 LNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNTYG 611
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A843V3L4_COLES (CRC domain-containing protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843V3L4_COLES) HSP 1 Score: 72.4 bits (176), Expect = 1.550e-10 Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 3
Query: 303 AFQRAEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFGS 503
A + + NK P+S GC C KS CLKKYC CY GVGC SC+CEGC NT G +R G + G+
Sbjct: 617 AAEIGDDANKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTFG-KRDGIMLIGN 682 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2510.6829.1 >prot_H-paniculata_contig2510.6829.1 ID=prot_H-paniculata_contig2510.6829.1|Name=mRNA_H-paniculata_contig2510.6829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp MTATIRRTRRPCWLLAGNLVDNDRNALERKPNAFQRAEMLNKNPSSVLEGback to top mRNA from alignment at H-paniculata_contig2510:3782..8625- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2510.6829.1 ID=mRNA_H-paniculata_contig2510.6829.1|Name=mRNA_H-paniculata_contig2510.6829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4844bp|location=Sequence derived from alignment at H-paniculata_contig2510:3782..8625- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2510:3782..8625- >mRNA_H-paniculata_contig2510.6829.1 ID=mRNA_H-paniculata_contig2510.6829.1|Name=mRNA_H-paniculata_contig2510.6829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig2510:3782..8625- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |