prot_H-paniculata_contig2510.6829.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2510.6829.1
Unique Nameprot_H-paniculata_contig2510.6829.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length222
Homology
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: D8LGL0_ECTSI (CRC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL0_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.030e-18
Identity = 46/80 (57.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   12 CWLLAGNLVDNDRNA-LERKPNAFQRAEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDR 90
            C  L   +V   R A LER P+AF RA  L   P SV  GAGCGC +S CLKKYCVC+ K + CGA CKCEGCLNT  +R
Sbjct:  232 CNRLGAVVVQAARRAVLERNPDAFHRAHSLETRPGSVTSGAGCGCTRSHCLKKYCVCFQKSLLCGAGCKCEGCLNTVENR 311          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A7I8KAL5_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KAL5_SPIIN)

HSP 1 Score: 74.7 bits (182), Expect = 6.310e-12
Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 0
Query:   14 LLAGNLVDNDRNALERKPNAFQRAEML-------NKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDR 90
            +LA   +   RN L   P   + +E         NK P+S     GC C KS+CLKKYC CY  GVGC  SC+CEGC+NT G R
Sbjct:  407 VLAARKLIESRNPLAFAPKVIRTSEPATEICEDTNKTPASARHKRGCNCKKSRCLKKYCECYQGGVGCSPSCRCEGCMNTFGKR 490          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A7I8JWL9_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JWL9_SPIIN)

HSP 1 Score: 74.3 bits (181), Expect = 8.960e-12
Identity = 38/68 (55.88%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   38 EMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFGSSGNKNK 105
            E +NK P+S     GC C KS CLKKYC CY  GVGC ASC+CEGC NT G RR G     S  N+ K
Sbjct:  577 EDINKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSASCRCEGCKNTFG-RREGVLPMVSEENEPK 643          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A6G1BN41_9ORYZ (CRC domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1BN41_9ORYZ)

HSP 1 Score: 70.9 bits (172), Expect = 2.090e-11
Identity = 33/61 (54.10%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   37 AEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIF 97
            A+  NK P+S     GC C KS CLKKYC CY  GVGC  SC+CEGC N  G RR G  + 
Sbjct:  100 ADDSNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNAFG-RREGVALI 159          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: UPI001E6911B0 (protein tesmin/TSO1-like CXC 2 isoform X2 n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E6911B0)

HSP 1 Score: 68.6 bits (166), Expect = 2.160e-11
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   31 PNAFQRAEML---NKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLN 85
            P+A    E+L   NK P+S     GC C KS CLKKYC CY  GVGC  SC+CEGC N
Sbjct:   21 PSADSVTEVLIDPNKTPTSARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKN 78          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A0A0L5F3_CUCSA (CRC domain-containing protein n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L5F3_CUCSA)

HSP 1 Score: 72.8 bits (177), Expect = 3.000e-11
Identity = 38/82 (46.34%), Postives = 45/82 (54.88%), Query Frame = 0
Query:   24 RNALERKPNAFQRAEML-------NKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFG 98
            RN L   P   + ++ L       NK P+S     GC C KS CLKKYC CY  GVGC  SC+CEGC N  G R+ G+ I G
Sbjct:  545 RNPLAFAPKVIRNSDSLPEPGDESNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFG-RKDGSSILG 625          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A0K9QWU5_SPIOL (CRC domain-containing protein n=7 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QWU5_SPIOL)

HSP 1 Score: 72.4 bits (176), Expect = 4.020e-11
Identity = 34/57 (59.65%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   38 EMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGA 94
            E LNK P+S     GC C KS CLKKYC CY  GVGC  SC+CEGC NT G R+ G+
Sbjct:  549 EELNKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSLSCRCEGCKNTFG-RKEGS 604          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: K7N3J0_SOYBN (CRC domain-containing protein n=6 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7N3J0_SOYBN)

HSP 1 Score: 72.4 bits (176), Expect = 4.050e-11
Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   40 LNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPG 88
            LNK P+S     GC C KS CLKKYC CY  GVGC  SC+CEGC NT G
Sbjct:  563 LNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNTYG 611          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A843V3L4_COLES (CRC domain-containing protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843V3L4_COLES)

HSP 1 Score: 72.4 bits (176), Expect = 4.140e-11
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   33 AFQRAEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFGS 99
            A +  +  NK P+S     GC C KS CLKKYC CY  GVGC  SC+CEGC NT G +R G  + G+
Sbjct:  617 AAEIGDDANKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTFG-KRDGIMLIGN 682          
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Match: A0A5P1FAA2_ASPOF (CRC domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FAA2_ASPOF)

HSP 1 Score: 72.0 bits (175), Expect = 4.600e-11
Identity = 34/58 (58.62%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   37 AEMLNKNPSSVLEGAGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGA 94
            AE  NK P+S     GC C KS CLKKYC C+  GVGC ASC+CEGC N  G R+ GA
Sbjct:  238 AEETNKTPASARHKRGCNCKKSSCLKKYCECFQGGVGCSASCRCEGCKNAFG-RKDGA 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2510.6829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL0_ECTSI1.030e-1857.50CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7I8KAL5_SPIIN6.310e-1245.24Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A7I8JWL9_SPIIN8.960e-1255.88Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A6G1BN41_9ORYZ2.090e-1154.10CRC domain-containing protein n=1 Tax=Oryza meyeri... [more]
UPI001E6911B02.160e-1155.17protein tesmin/TSO1-like CXC 2 isoform X2 n=1 Tax=... [more]
A0A0A0L5F3_CUCSA3.000e-1146.34CRC domain-containing protein n=5 Tax=Cucurbitacea... [more]
A0A0K9QWU5_SPIOL4.020e-1159.65CRC domain-containing protein n=7 Tax=Spinacia ole... [more]
K7N3J0_SOYBN4.050e-1163.27CRC domain-containing protein n=6 Tax=Glycine subg... [more]
A0A843V3L4_COLES4.140e-1150.75CRC domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A5P1FAA2_ASPOF4.600e-1158.62CRC domain-containing protein n=2 Tax=Asparagus of... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 48..89
e-value: 2.6E-10
score: 50.3
IPR005172CRC domainPFAMPF03638TCRcoord: 52..86
e-value: 3.0E-11
score: 43.4
IPR005172CRC domainPROSITEPS51634CRCcoord: 1..88
score: 14.573
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 25..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2510contigH-paniculata_contig2510:3782..7992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2510.6829.1mRNA_H-paniculata_contig2510.6829.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2510 3782..8625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2510.6829.1 ID=prot_H-paniculata_contig2510.6829.1|Name=mRNA_H-paniculata_contig2510.6829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
MTATIRRTRRPCWLLAGNLVDNDRNALERKPNAFQRAEMLNKNPSSVLEG
AGCGCMKSQCLKKYCVCYNKGVGCGASCKCEGCLNTPGDRRHGAHIFGSS
GNKNKKDPSSSSSSSNSSSQLQQEHRAKKAKTQQYRSHPNDNKRSKLPAT
TVATAAAQSARSTQVHKADNGYEDGLFFTPASGMPVSSPTSTEGTISPGL
PSEAASEERDEGDQLLPGGGAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam