prot_H-paniculata_contig2504.6817.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2504.6817.1
Unique Nameprot_H-paniculata_contig2504.6817.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length146
Homology
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BLAST of mRNA_H-paniculata_contig2504.6817.1 vs. uniprot
Match: D8LKI3_ECTSI (Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI3_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.640e-22
Identity = 50/109 (45.87%), Postives = 65/109 (59.63%), Query Frame = 0 
Query:   37 RPRLAGWGLPLGSTRAYGWIFDAVRTRLAEGHIVGCSRQVWHRDPWESDHAEEGKEQDHTDAGGAFVDGLGPQTRRSTAVDGFLFPPSNRVMRGLRVGVSYCILEMFER 145
            RPR+AGWG+  G+T   GW+F+ +R RL++G ++GCSRQ W R PW                      G+G Q  +  A  G LFPPSNRVM+GL  GVSYC+LE FE+
Sbjct:  302 RPRIAGWGILAGTTPPLGWVFENIRNRLSDGQVLGCSRQAWVRCPW----------------------GIGDQ--QEAADGGMLFPPSNRVMKGLCSGVSYCVLEAFEK 386
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2504.6817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKI3_ECTSI1.640e-2245.87Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2504contigH-paniculata_contig2504:4342..5619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2504.6817.1mRNA_H-paniculata_contig2504.6817.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2504 4342..5619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2504.6817.1 ID=prot_H-paniculata_contig2504.6817.1|Name=mRNA_H-paniculata_contig2504.6817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
MSDAAQSTLAMSEPPQSLPHDVGVARIGGEPRGGTVRPRLAGWGLPLGST
RAYGWIFDAVRTRLAEGHIVGCSRQVWHRDPWESDHAEEGKEQDHTDAGG
AFVDGLGPQTRRSTAVDGFLFPPSNRVMRGLRVGVSYCILEMFERA
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