prot_H-paniculata_contig24952.6786.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24952.6786.1
Unique Nameprot_H-paniculata_contig24952.6786.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length473
Homology
BLAST of mRNA_H-paniculata_contig24952.6786.1 vs. uniprot
Match: D7FYV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV6_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 3.190e-84
Identity = 236/506 (46.64%), Postives = 288/506 (56.92%), Query Frame = 0
Query:    1 SFDHLKAELFRQKQLAEGLRKEVDQREEEKRQLLDLARTAKESEAALVRAAYERRA-RHQ--EELARNGRGAVGGKKLWRVPPPPD-DVADGSGNEPCGPFKGRANEIYDRIDNSY----ENPSDWTVEDRLVLAGLRSKPSFSDEKAA----IDSSR-RSEEIGGDSTFRERSRGARAWSSQGLGNYNSTSDADREARRSLRYRDLSSPGGIRASSRYVFPDGSVRRQL----LEVGSGDTIGGSENRGVANSNTGVPMPLIGTSRMKSADLSSDFGLKAVHPGGADDTSRPIHNDAGREDISGRRRALKRGGGAYRGPGAAPXXXXXXGGRPPRAYVPFLNLPKLGITEGSRGWCGGSSWDHDREGA--------VASGNVGNTSHRRRRGRPLAGVGGVLVSAGRAMLTGPSRPGTDASLSCWSSCSSRACCEVDGKG--RRRCHRRGHEHHG-------YGDGEISDEGNSIESGSTDVEFLRRRAESKLRSLERREAADAA 472
            S + L+ EL++QKQL E LR EV Q+E EKR+L+D+AR AKESEAA +RAAYERRA +H   +EL   G GA G  +LWRVPPPP  + A+G G  P    + RA   +    N+Y    +  +D T EDRL+LAGLR     SD   A     D+ R R +++GGDSTFRE+  GARAWSS  + N   + D     RR L Y  +S PGGIRA SRYVFPDGSVRR+L     E G GD                VPMPL+GTSR+ SADLS   G+ ++  GG       +   + R   +GR  +    GG +RGPGAAP       GRPPRA+VPFLNLP             G     D +G+        V S  V   S  +RRGRPLAG+GGVLVS GRAMLTGP RPGT A+         R      G G  RRR  R+     G        GD E SD+  S+ SGSTDVEFLRRRAE+KL+SL+RREAA+ A
Sbjct:  947 SIEKLRTELWKQKQLTEVLRHEVGQQEAEKRKLIDIARVAKESEAAALRAAYERRASKHPPAKELGIAGGGAEG-NELWRVPPPPSTEGAEGEGRTPSPSARRRAESNF-AAKNAYVANRKFDTDETAEDRLLLAGLRR---LSDGNRAPGGGCDTDRLRKDDLGGDSTFREQVPGARAWSSGAVSN---SRDGRDSKRRPLDYGAVS-PGGIRAESRYVFPDGSVRRRLETPAAEGGVGDXXXXXXX---------VPMPLVGTSRIASADLSFALGIDSLRGGGNGAAGDDVEKASWRRRGTGRTGSRDNEGGEHRGPGAAPGAEWAPVGRPPRAFVPFLNLPVSNGKANGNNSKEGRWASRDSDGSDSPYFLPPVYSAAVNGRS--KRRGRPLAGIGGVLVSPGRAMLTGPGRPGTGATS------PERPAYGETGSGHHRRRQSRQRARREGADLGSTSIGDEEFSDDCESVGSGSTDVEFLRRRAEAKLKSLDRREAAEKA 1426          
BLAST of mRNA_H-paniculata_contig24952.6786.1 vs. uniprot
Match: A0A6H5KLL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL2_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.090e-80
Identity = 229/494 (46.36%), Postives = 279/494 (56.48%), Query Frame = 0
Query:    1 SFDHLKAELFRQKQLAEGLRKEVDQREEEKRQLLDLARTAKESEAALVRAAYERRA-RHQ--EELARNGRGAVGGKKLWRVPPPPD-DVADGSGNEPCGPFKGRANEIYDRIDNSYENPS---DWTVEDRLVLAGLRSKPSFSDEKAAIDSSRRSEEI--GGDSTFRERSRGARAWSSQGLGNYNSTSDADREARRSLRYRDLSSPGGIRASSRYVFPDGSVRRQLLEVGSGDTIGGSENRGVANSNTGVPMPLIGTSRMKSADLSSDFGLKAVHPGGADDTSRPIHNDAGREDISGRRRALKRGGGAYRGPGAAPXXXXXXGGRPPRAYVPFLNLPKL-----GITEGSRGWCGGSSWDHDREG---AVASGNVGNTSHRRRRGRPLAGVGGVLVSAGRAMLTGPSRPGTDASLSCWSSCSSRACCEVDG------KGRRRCHRRGHEHHGY--GDGEISDEGNSIESGSTDVEFLRRRAESKLRSLERREAA 469
            S + L+ EL++QKQL E LR EV Q+E EKR+L+D+AR AKESEAA +RAAYERRA +H   +EL   G GA  G +LWRVPPPP  +  +G G  P    + RA       +    N     D T EDRL+LAGLR      D   A      ++ +  GGDSTFRE+  GA AWSS   G  +S  D      R L Y  +S PGGIRA SRYVFPDGSVR++L      +T       G       VPMPL+GTSR+ SADLS   G+ ++  GG+      +   +GR   +GR  +    GG +RGPGAAP       GRPPRA+VPFLNLP L     G T   R W    S   D       V S  V   S  +RRGRPLAG+GGVLVS GRAMLTGP RPGT A+     S    A  E         + RRR  R G +      GD E SD+ +S+ SGSTDVEFLRRRAE+KL+SL+R+EAA
Sbjct:  976 SIEKLRTELWKQKQLTEVLRHEVGQQEAEKRKLIDIARVAKESEAAALRAAYERRASKHPPAKELGIAG-GAAEGNELWRVPPPPAVEGVEGEGRTPSPSDRRRAESTRAAKNACVANRKLDMDETAEDRLLLAGLRR---LGDGNRAPGGGCDTDRLRNGGDSTFREQVPGALAWSS---GAASSGRDGRDSKGRPLDYGAVS-PGGIRAESRYVFPDGSVRQRL------ETPAAEGGVGXXXXXXXVPMPLVGTSRIASADLSFALGIDSLRGGGSGAAGDDVEKASGRRRSTGRTGSRGNEGGEHRGPGAAPGAEWAPVGRPPRAFVPFLNLPVLNGKASGNTSKERRWASRGSDGSDSPSFLPPVYSAAVNGRS--KRRGRPLAGIGGVLVSPGRAMLTGPGRPGTGAT-----SPERPAYGEAGSVHHRRRQSRRRARREGVDRDSISIGDEEFSDDCDSVGSGSTDVEFLRRRAEAKLQSLDRQEAA 1448          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24952.6786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV6_ECTSI3.190e-8446.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL2_9PHAE1.090e-8046.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24952contigH-paniculata_contig24952:298..2351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24952.6786.1mRNA_H-paniculata_contig24952.6786.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24952 298..2352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24952.6786.1 ID=prot_H-paniculata_contig24952.6786.1|Name=mRNA_H-paniculata_contig24952.6786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=473bp
SFDHLKAELFRQKQLAEGLRKEVDQREEEKRQLLDLARTAKESEAALVRA
AYERRARHQEELARNGRGAVGGKKLWRVPPPPDDVADGSGNEPCGPFKGR
ANEIYDRIDNSYENPSDWTVEDRLVLAGLRSKPSFSDEKAAIDSSRRSEE
IGGDSTFRERSRGARAWSSQGLGNYNSTSDADREARRSLRYRDLSSPGGI
RASSRYVFPDGSVRRQLLEVGSGDTIGGSENRGVANSNTGVPMPLIGTSR
MKSADLSSDFGLKAVHPGGADDTSRPIHNDAGREDISGRRRALKRGGGAY
RGPGAAPGASFAPGGRPPRAYVPFLNLPKLGITEGSRGWCGGSSWDHDRE
GAVASGNVGNTSHRRRRGRPLAGVGGVLVSAGRAMLTGPSRPGTDASLSC
WSSCSSRACCEVDGKGRRRCHRRGHEHHGYGDGEISDEGNSIESGSTDVE
FLRRRAESKLRSLERREAADAAP
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