prot_H-paniculata_contig24930.6777.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24930.6777.1
Unique Nameprot_H-paniculata_contig24930.6777.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: D7G5I4_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5I4_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 5.030e-93
Identity = 146/163 (89.57%), Postives = 157/163 (96.32%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 163
            +PLF+ NKDVCVEAVTGSGKTLAFVVPA+EMILRRE +LKRNQ+G IILTPTRELANQIFGVVSKF+E LDEA+PLLLVGGTSVE+CLAAFRKGGA ILVGTPGRVEDMLNNY+VFD RELEAL+LDEADTLLDMGFAGTLNSIF+LLPKQRRTGLFSATQTR
Sbjct:    1 MPLFMCNKDVCVEAVTGSGKTLAFVVPAIEMILRREVDLKRNQVGAIILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTSVEECLAAFRKGGASILVGTPGRVEDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTR 163          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A835YKT0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 7.080e-72
Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLD--EARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 163
            IPLFL NKDVCVEAVTGSGKTLAFV+P +EM++RRET LKRNQ+G II+TPTRELA QI  VVS FA  +   EAR LLLVGGTSV D +AAFR+ GA ILV TPGR+ED+L+NY++FD RELEALILDEADTLLDMGFA  L +I   LPKQRRTGLFSATQTR
Sbjct:   34 IPLFLRNKDVCVEAVTGSGKTLAFVIPVLEMLMRRETPLKRNQVGAIIITPTRELALQIHRVVSHFAPHVGGGEARALLLVGGTSVADAVAAFRRDGAAILVATPGRLEDLLSNYALFDTRELEALILDEADTLLDMGFAAALGAILGALPKQRRTGLFSATQTR 198          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: W7TH80_9STRA (Atp-dependent rna helicase ddx55 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH80_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.330e-57
Identity = 109/165 (66.06%), Postives = 124/165 (75.15%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTS-VEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 163
            IPLFLTNKDVCVEAVTGSGKTLAFV+PAVEMILRR++ LK++++G II++PTRELA QI  V + F        PLLLVGGT  V D    F + GA ILVGTPGR+ D+L  Y      RELE LILDEADTLL+MGF  TL +I   LPKQRRTGLFSATQTR
Sbjct:   48 IPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTR 212          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S2A8C9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8C9_TRICV)

HSP 1 Score: 187 bits (475), Expect = 2.510e-55
Identity = 98/161 (60.87%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQ 161
            +PLFLTNKDV V AVTGSGKTLAF++PA EMILRR + LK+ Q+G +I++PTRELA Q   V            PLLLVGG  V D L AF+K G+ I+VGTPGR++D+L+ Y   D  ELE LILDEAD LLDMGF  TL SI   LP+ RRTGLFSAT+
Sbjct:   42 LPLFLTNKDVHVRAVTGSGKTLAFLIPAAEMILRRTSVLKKRQVGALIVSPTRELARQTHEVAGDLCRRCSLPEPLLLVGGNPVVDDLTAFKKRGSDIVVGTPGRLDDILSRYDDLDVSELEVLILDEADVLLDMGFEVTLTSIIGRLPRMRRTGLFSATK 202          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S2EFW0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFW0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.690e-55
Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGG----TSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 162
            +PLFLTNKDVCV+AVTGSGKTLAF+VP +EMILRR + LK+ Q+G I+++PTRELA Q  GV +   +      PLLLVGG     SVE  L +F + G+ I++GTPGR+ED+L+ +   D  ELE L+LDEAD LLDMGF  TL S+   LPK RRTGLFSAT+T
Sbjct:   18 LPLFLTNKDVCVQAVTGSGKTLAFLVPMIEMILRRTSLLKKRQVGGIVVSPTRELARQTHGVATDLCKFCSLPEPLLLVGGGSGYRSVESDLKSFNENGSDIVIGTPGRLEDVLSRFDDLDVSELECLVLDEADVLLDMGFEVTLTSLLGRLPKMRRTGLFSATKT 183          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S0KYN7_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYN7_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.400e-54
Identity = 101/162 (62.35%), Postives = 120/162 (74.07%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 162
            IPLFLTNKDV V+AVTGSGKTLAF++P VEMILRR   L + QIG ++L+PTRELA Q + V S        + PLLLVGGTSV + L +FR+ G+ I++GTPGR+ED+L  Y V D  ELE LILDEAD LLDMGF  +L +I   LPK RRTGLFSAT T
Sbjct:   49 IPLFLTNKDVAVQAVTGSGKTLAFLIPIVEMILRRTNLLHKRQIGGLVLSPTRELARQTYEVASGLCRYSSLSDPLLLVGGTSVTEDLTSFRRKGSDIVIGTPGRIEDILTRYDVIDVAELECLILDEADVLLDMGFDVSLTTITHKLPKMRRTGLFSATGT 210          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S1C1W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1W4_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.200e-53
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 162
            IPL LTNKDVCVEAVTGSGKTLAFV+P +E++ +RET L+ +++G II++PTRELA QI  VV  FA        +LLVGGT V + L A   G   ++V TPGR+ D+L     V   R LE L+LDEADTLLD+GFA TL  I   LPKQRRTGLFSATQT
Sbjct:   64 IPLLLTNKDVCVEAVTGSGKTLAFVIPIMELLAKRETRLRPHEVGAIIISPTRELARQIHEVVEIFAVAHKHTSSVLLVGGTEVSEDLEACATG-CNVIVATPGRLSDILTRADGVPSIRSLEILVLDEADTLLDLGFADTLTDILGRLPKQRRTGLFSATQT 225          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A1A8I2E0_NOTKU (RNA helicase (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8I2E0_NOTKU)

HSP 1 Score: 177 bits (449), Expect = 1.500e-52
Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-----VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 163
            IPLF++NKDV  EAVTGSGKTLAFV+P +E++LRRE +LK+ Q+G +++TPTRELA QI  V  KF +   +   +LL+GG++  + +  F+  G  I++ TPGR+EDM    S         R L+ L+LDEAD LLDMGF  +LN+I   LPKQRRTGLFSATQT+
Sbjct:   40 IPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLRREEKLKKRQVGALVITPTRELALQISEVTEKFIQKFPQFTQILLIGGSNPIEDVEKFKDQGGNIVIATPGRLEDMFRRKSDGLDLASAVRSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQ 207          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A7S4S3_NEMVE (RNA helicase n=5 Tax=Nematostella vectensis TaxID=45351 RepID=A7S4S3_NEMVE)

HSP 1 Score: 184 bits (468), Expect = 1.780e-52
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-----VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 162
            IPLF++NKDV VEAVTGSGKTLAFV+P +E+ILRRE +LK+++IG +I+TPTRELA QI  VVS   E +   R LLL+GG      L AF+  GA I++GTPGR+ED L             + LE L+LDEAD LLDMGF  ++N+I   LPKQRRTGLFSATQT
Sbjct:   36 IPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKLKKHEIGALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGRLEDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQRRTGLFSATQT 202          
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A6P8IU46_ACTTE (ATP-dependent RNA helicase DDX55-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IU46_ACTTE)

HSP 1 Score: 177 bits (449), Expect = 4.840e-52
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 0
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAE-LLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDA------RELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 162
            IPLF++NKDV VEAVTGSGKTLAFV+P +EM++RRE +LK++ IG +I+TPTRELA QI  V+S F E    + R +L +GG      +  F+  G  I+VGTPGR+ED+L              + LE L+LDEAD LLD+GF  ++NSI   LPKQRRTGLFSATQT
Sbjct:   36 IPLFMSNKDVAVEAVTGSGKTLAFVIPIIEMLMRREEKLKKHDIGALIITPTRELAKQIEEVLSNFTEGNTPKLRQMLFIGGAETSTDIKNFKDNGGNIIVGTPGRLEDLLTRQHQHGIDLGAHLKSLEVLVLDEADRLLDLGFESSINSILGFLPKQRRTGLFSATQT 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5I4_ECTSI5.030e-9389.57DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YKT0_9STRA7.080e-7275.15P-loop containing nucleoside triphosphate hydrolas... [more]
W7TH80_9STRA7.330e-5766.06Atp-dependent rna helicase ddx55 n=2 Tax=Monodopsi... [more]
A0A7S2A8C9_TRICV2.510e-5560.87Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2EFW0_9STRA4.690e-5559.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0KYN7_9STRA1.400e-5462.35Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S1C1W4_9STRA3.200e-5359.51Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1A8I2E0_NOTKU1.500e-5253.57RNA helicase (Fragment) n=1 Tax=Nothobranchius kuh... [more]
A7S4S3_NEMVE1.780e-5258.68RNA helicase n=5 Tax=Nematostella vectensis TaxID=... [more]
A0A6P8IU46_ACTTE4.840e-5255.03ATP-dependent RNA helicase DDX55-like n=1 Tax=Acti... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..163
e-value: 2.8E-20
score: 83.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..163
score: 25.008
NoneNo IPR availableGENE3D3.40.50.300coord: 1..163
e-value: 2.4E-51
score: 176.0
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..162
NoneNo IPR availablePANTHERPTHR24031:SF2ATP-DEPENDENT RNA HELICASE DDX55coord: 1..162
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..162
e-value: 8.0E-39
score: 133.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24930contigH-paniculata_contig24930:659..3167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24930.6777.1mRNA_H-paniculata_contig24930.6777.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24930 659..3167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24930.6777.1 ID=prot_H-paniculata_contig24930.6777.1|Name=mRNA_H-paniculata_contig24930.6777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILT
PTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILV
GTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPK
QRRTGLFSATQTR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase