mRNA_H-paniculata_contig24930.6777.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24930.6777.1
Unique NamemRNA_H-paniculata_contig24930.6777.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: D7G5I4_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5I4_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 5.030e-93
Identity = 146/163 (89.57%), Postives = 157/163 (96.32%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 489
            +PLF+ NKDVCVEAVTGSGKTLAFVVPA+EMILRRE +LKRNQ+G IILTPTRELANQIFGVVSKF+E LDEA+PLLLVGGTSVE+CLAAFRKGGA ILVGTPGRVEDMLNNY+VFD RELEAL+LDEADTLLDMGFAGTLNSIF+LLPKQRRTGLFSATQTR
Sbjct:    1 MPLFMCNKDVCVEAVTGSGKTLAFVVPAIEMILRREVDLKRNQVGAIILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTSVEECLAAFRKGGASILVGTPGRVEDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTR 163
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A835YKT0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 7.080e-72
Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLD--EARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 489
            IPLFL NKDVCVEAVTGSGKTLAFV+P +EM++RRET LKRNQ+G II+TPTRELA QI  VVS FA  +   EAR LLLVGGTSV D +AAFR+ GA ILV TPGR+ED+L+NY++FD RELEALILDEADTLLDMGFA  L +I   LPKQRRTGLFSATQTR
Sbjct:   34 IPLFLRNKDVCVEAVTGSGKTLAFVIPVLEMLMRRETPLKRNQVGAIIITPTRELALQIHRVVSHFAPHVGGGEARALLLVGGTSVADAVAAFRRDGAAILVATPGRLEDLLSNYALFDTRELEALILDEADTLLDMGFAAALGAILGALPKQRRTGLFSATQTR 198
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: W7TH80_9STRA (Atp-dependent rna helicase ddx55 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH80_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.330e-57
Identity = 109/165 (66.06%), Postives = 124/165 (75.15%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTS-VEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 489
            IPLFLTNKDVCVEAVTGSGKTLAFV+PAVEMILRR++ LK++++G II++PTRELA QI  V + F        PLLLVGGT  V D    F + GA ILVGTPGR+ D+L  Y      RELE LILDEADTLL+MGF  TL +I   LPKQRRTGLFSATQTR
Sbjct:   48 IPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTR 212
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S2A8C9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8C9_TRICV)

HSP 1 Score: 187 bits (475), Expect = 2.510e-55
Identity = 98/161 (60.87%), Postives = 116/161 (72.05%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQ 483
            +PLFLTNKDV V AVTGSGKTLAF++PA EMILRR + LK+ Q+G +I++PTRELA Q   V            PLLLVGG  V D L AF+K G+ I+VGTPGR++D+L+ Y   D  ELE LILDEAD LLDMGF  TL SI   LP+ RRTGLFSAT+
Sbjct:   42 LPLFLTNKDVHVRAVTGSGKTLAFLIPAAEMILRRTSVLKKRQVGALIVSPTRELARQTHEVAGDLCRRCSLPEPLLLVGGNPVVDDLTAFKKRGSDIVVGTPGRLDDILSRYDDLDVSELEVLILDEADVLLDMGFEVTLTSIIGRLPRMRRTGLFSATK 202
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S2EFW0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFW0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.690e-55
Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGG----TSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 486
            +PLFLTNKDVCV+AVTGSGKTLAF+VP +EMILRR + LK+ Q+G I+++PTRELA Q  GV +   +      PLLLVGG     SVE  L +F + G+ I++GTPGR+ED+L+ +   D  ELE L+LDEAD LLDMGF  TL S+   LPK RRTGLFSAT+T
Sbjct:   18 LPLFLTNKDVCVQAVTGSGKTLAFLVPMIEMILRRTSLLKKRQVGGIVVSPTRELARQTHGVATDLCKFCSLPEPLLLVGGGSGYRSVESDLKSFNENGSDIVIGTPGRLEDVLSRFDDLDVSELECLVLDEADVLLDMGFEVTLTSLLGRLPKMRRTGLFSATKT 183
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S0KYN7_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYN7_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.400e-54
Identity = 101/162 (62.35%), Postives = 120/162 (74.07%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 486
            IPLFLTNKDV V+AVTGSGKTLAF++P VEMILRR   L + QIG ++L+PTRELA Q + V S        + PLLLVGGTSV + L +FR+ G+ I++GTPGR+ED+L  Y V D  ELE LILDEAD LLDMGF  +L +I   LPK RRTGLFSAT T
Sbjct:   49 IPLFLTNKDVAVQAVTGSGKTLAFLIPIVEMILRRTNLLHKRQIGGLVLSPTRELARQTYEVASGLCRYSSLSDPLLLVGGTSVTEDLTSFRRKGSDIVIGTPGRIEDILTRYDVIDVAELECLILDEADVLLDMGFDVSLTTITHKLPKMRRTGLFSATGT 210
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A7S1C1W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1W4_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.200e-53
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 486
            IPL LTNKDVCVEAVTGSGKTLAFV+P +E++ +RET L+ +++G II++PTRELA QI  VV  FA        +LLVGGT V + L A   G   ++V TPGR+ D+L     V   R LE L+LDEADTLLD+GFA TL  I   LPKQRRTGLFSATQT
Sbjct:   64 IPLLLTNKDVCVEAVTGSGKTLAFVIPIMELLAKRETRLRPHEVGAIIISPTRELARQIHEVVEIFAVAHKHTSSVLLVGGTEVSEDLEACATG-CNVIVATPGRLSDILTRADGVPSIRSLEILVLDEADTLLDLGFADTLTDILGRLPKQRRTGLFSATQT 225
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A1A8I2E0_NOTKU (RNA helicase (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8I2E0_NOTKU)

HSP 1 Score: 177 bits (449), Expect = 1.500e-52
Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-----VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQTR 489
            IPLF++NKDV  EAVTGSGKTLAFV+P +E++LRRE +LK+ Q+G +++TPTRELA QI  V  KF +   +   +LL+GG++  + +  F+  G  I++ TPGR+EDM    S         R L+ L+LDEAD LLDMGF  +LN+I   LPKQRRTGLFSATQT+
Sbjct:   40 IPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLRREEKLKKRQVGALVITPTRELALQISEVTEKFIQKFPQFTQILLIGGSNPIEDVEKFKDQGGNIVIATPGRLEDMFRRKSDGLDLASAVRSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQ 207
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A7S4S3_NEMVE (RNA helicase n=5 Tax=Nematostella vectensis TaxID=45351 RepID=A7S4S3_NEMVE)

HSP 1 Score: 184 bits (468), Expect = 1.780e-52
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYS-----VFDARELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 486
            IPLF++NKDV VEAVTGSGKTLAFV+P +E+ILRRE +LK+++IG +I+TPTRELA QI  VVS   E +   R LLL+GG      L AF+  GA I++GTPGR+ED L             + LE L+LDEAD LLDMGF  ++N+I   LPKQRRTGLFSATQT
Sbjct:   36 IPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKLKKHEIGALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGRLEDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQRRTGLFSATQT 202
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BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Match: A0A6P8IU46_ACTTE (ATP-dependent RNA helicase DDX55-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IU46_ACTTE)

HSP 1 Score: 177 bits (449), Expect = 4.840e-52
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 1 
Query:    1 IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILTPTRELANQIFGVVSKFAE-LLDEARPLLLVGGTSVEDCLAAFRKGGAGILVGTPGRVEDMLNNYSVFDA------RELEALILDEADTLLDMGFAGTLNSIFALLPKQRRTGLFSATQT 486
            IPLF++NKDV VEAVTGSGKTLAFV+P +EM++RRE +LK++ IG +I+TPTRELA QI  V+S F E    + R +L +GG      +  F+  G  I+VGTPGR+ED+L              + LE L+LDEAD LLD+GF  ++NSI   LPKQRRTGLFSATQT
Sbjct:   36 IPLFMSNKDVAVEAVTGSGKTLAFVIPIIEMLMRREEKLKKHDIGALIITPTRELAKQIEEVLSNFTEGNTPKLRQMLFIGGAETSTDIKNFKDNGGNIIVGTPGRLEDLLTRQHQHGIDLGAHLKSLEVLVLDEADRLLDLGFESSINSILGFLPKQRRTGLFSATQT 204
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24930.6777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5I4_ECTSI5.030e-9389.57DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YKT0_9STRA7.080e-7275.15P-loop containing nucleoside triphosphate hydrolas... [more]
W7TH80_9STRA7.330e-5766.06Atp-dependent rna helicase ddx55 n=2 Tax=Monodopsi... [more]
A0A7S2A8C9_TRICV2.510e-5560.87Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2EFW0_9STRA4.690e-5559.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0KYN7_9STRA1.400e-5462.35Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S1C1W4_9STRA3.200e-5359.51Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1A8I2E0_NOTKU1.500e-5253.57RNA helicase (Fragment) n=1 Tax=Nothobranchius kuh... [more]
A7S4S3_NEMVE1.780e-5258.68RNA helicase n=5 Tax=Nematostella vectensis TaxID=... [more]
A0A6P8IU46_ACTTE4.840e-5255.03ATP-dependent RNA helicase DDX55-like n=1 Tax=Acti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24930contigH-paniculata_contig24930:659..3167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.5
Seed ortholog evalue6.1e-77
Seed eggNOG ortholog2880.D7G5I4
Preferred nameDDX55
KEGG koko:K14809,ko:K16833
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008187,GO:0008266,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1902626,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0345@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-22_000740.1
EC3.6.4.13
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03009,ko03036
Exons3
Model size492
Cds size492
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24930.6777.1prot_H-paniculata_contig24930.6777.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24930 659..3167 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929730.6257546-CDS-H-paniculata_contig24930:658..7921622929730.6257546-CDS-H-paniculata_contig24930:658..792Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24930 659..792 -
1691480986.3964772-CDS-H-paniculata_contig24930:658..7921691480986.3964772-CDS-H-paniculata_contig24930:658..792Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24930 659..792 -
1622929730.6378107-CDS-H-paniculata_contig24930:1512..17121622929730.6378107-CDS-H-paniculata_contig24930:1512..1712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24930 1513..1712 -
1691480986.4084854-CDS-H-paniculata_contig24930:1512..17121691480986.4084854-CDS-H-paniculata_contig24930:1512..1712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24930 1513..1712 -
1622929730.6496596-CDS-H-paniculata_contig24930:3009..31671622929730.6496596-CDS-H-paniculata_contig24930:3009..3167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24930 3010..3167 -
1691480986.4164743-CDS-H-paniculata_contig24930:3009..31671691480986.4164743-CDS-H-paniculata_contig24930:3009..3167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24930 3010..3167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24930.6777.1

>prot_H-paniculata_contig24930.6777.1 ID=prot_H-paniculata_contig24930.6777.1|Name=mRNA_H-paniculata_contig24930.6777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
IPLFLTNKDVCVEAVTGSGKTLAFVVPAVEMILRRETELKRNQIGVIILT
PTRELANQIFGVVSKFAELLDEARPLLLVGGTSVEDCLAAFRKGGAGILV
GTPGRVEDMLNNYSVFDARELEALILDEADTLLDMGFAGTLNSIFALLPK
QRRTGLFSATQTR*
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mRNA from alignment at H-paniculata_contig24930:659..3167-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24930.6777.1 ID=mRNA_H-paniculata_contig24930.6777.1|Name=mRNA_H-paniculata_contig24930.6777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2509bp|location=Sequence derived from alignment at H-paniculata_contig24930:659..3167- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCCGTTGTTCCTAACGAACAAAGACGTGTGCGTGGAAGCTGTGACGGG
TTCGGGAAAAACACTGGCCTTCGTTGTCCCCGCGGTGGAGATGATCCTGC
GCAGGGAGACCGAACTCAAGCGCAACCAGATCGGTGTCATCATCCTAACA
CCGACCAGGTGAAAAAAAAAAAAATGGAATATCGCCACCTGGCATAAGGG
ATTTTGAGACATTTCACGCCGTACCCATGTATTGCATGTCGCAGTTGTTG
GGCCATATGTATTTCACGCGGTAGGTGGATTGTTGGTCAGGGCTGGAGGT
ATTTCTGGCAGTTCCTTGAGGAACGGCAGGCGAGGGGTTACCGCTCTCAG
GAATCAGGATGCTTATTCAACCCAGCTGTTACTTGAAAAAGTAGATATTG
CGGTGCACGCGGGTTGGTTGGTGTAGCCCGCGACCGTGACGAGGATGGGG
GGTTGATGTACGGTGAAGTCTATCGTCATCATCCAAACCCTGTCTCGTTC
GTTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGCCATGTGTTACATTTG
TTGGCAGTAAAAAAAGCTGCACGCGTCGAATCACTCACTCCGAAGAGTAG
AGCAGGTGAATCTATTTTACCCTCTCTCTTGGGAAATAGACAATATTCAT
TAAAGTGAAGAGTGTCCAATAAAACAGGTCCATGTATGGGTCAAAACCAT
AGAAAAAGTAAAGCTCAGACAGTGTTAAGATATTTATTTGTGGTACTATT
CAGGAACGTCATTCTCCAAAGATGATCGGCCGGTCCCCCTGTCGTAGGGG
ACCCCTTTGTTGTTAAAATATGTTTGAAGGCACCTACAAAAATATATCGA
TATTTGAGATTACGTGTTTCGCCAATCGTGCATCATAGAGTGTATCGTTG
TCGTTCGAGCCCTCTTATCTCCGTTCAAGTTGATGAGTGAGTGTATGCAT
GTATGTATGTAGCTATGAGTGTGGGGTTGCATAAGCTTAAGCATGATGAC
TTATGTTCAATGGAAATACTTAAGATGATGGCTATAGAATCATTACAATA
CAAACAGCTAGCTGGCTGTCTAGTTCGCTTGTATTCATTGCTGCTCCCCG
CCCCTCGCCCCCTTATCCCCCCTCCACTCCCGCAGCTGATGGTTATATCA
CACGAAATGTAAAAAAACGCCTCAAAAGGTATCGTTCAACGTCGTGCAGC
GTTGGAAGATGACTTCGCAGTATTCTTGTCCGCGTTAATTTCATTCGTTC
AAATCTTTTGACGTGTAGCATGTTCCGGTTTAAATTTTTGTCGTATGTAT
AGCCGTGAGTGTAAACTACACTAGCTCAAGGATGACATACGTGTGTATCT
ACTGGAGATGCTACGAATCGCGATGAATCATAAAATCAGTCATCACGTGG
CTGACTTGTCTACTCCGCTTGTTTCCATTGCTGTCCCTCTCCCCCCCCCT
CCCAGGGAGCTCGCCAACCAAATATTCGGCGTCGTCTCGAAATTCGCCGA
GCTACTCGATGAGGCCAGACCTCTGCTCCTCGTCGGTGGTACTAGCGTCG
AGGATTGTCTTGCAGCTTTCAGGAAAGGCGGTGCGGGCATCTTGGTGGGC
ACCCCGGGAAGGGTGGAGGACATGCTAAACAACTATAGCGTGTTCGACGC
GCGTGGTGAGTTTGATGGGGTATGTAAGTGTCCTGCAATCTGTATATGGT
TATAACTGTTGATCAGCACCTCTACCAGTCTTTGATACATGTATGATGTT
GTACATTTTTGTCCACCTTCCATCGGTTCCCGCACCGATCGTTGGTACAC
AGCAGGGGTGTCCGATTTGGTCAGCAGGGGCGATATGATTTGTACATGGT
TGTCACCGTTGAACGGTACTTGCACGGATCGTTGGTACACTGTGTTTCGG
AGTAGTCGAGGGAAGCCCAAGTGATGGTCACCGTTGATCGGTTCTGGCAC
CGCTCGTTCGAACGTGTTTGGCCGAAAGATCTCGGTAGGAGCGATGTGAT
TCGTACATGTTTGTCGCCGTTGATCGGTATCTCCACCAATCATTGGCACA
TGTCACCTCGGATCTGCACCGTGAAAATTGTGTGTATGTATTTTTCTACG
GCTGAGTGGTTCGAGCCGACTCGTACCTATATCGATCGGTCCGATGTGTG
AAAATGTGGTATTATGGTCCTGTGTTTAACGCTAGTCGTACCCAAACTTC
TGGTCATGTGTCTTCTTCCATTTCAGCATTGGAGAATTTGATCGACGTAG
TTCCATTTTTGAACTCCATGCTTCCATTTTGCCAATTCTGAAAAGTAGAT
CATGTATGTTTTCATTAAAAGAGAAACACAAAGATAACGATGACACCGTC
TCGTTTTTTTGGGGTTTTTTTTCAGAGTTGGAAGCTTTGATCCTGGACGA
GGCAGATACCCTACTCGACATGGGCTTCGCAGGCACGTTGAACTCGATTT
TCGCCCTGCTGCCCAAACAGCGGAGGACGGGTCTTTTCTCAGCTACCCAG
ACGCGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig24930:659..3167-

>mRNA_H-paniculata_contig24930.6777.1 ID=mRNA_H-paniculata_contig24930.6777.1|Name=mRNA_H-paniculata_contig24930.6777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig24930:659..3167- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCCGTTGTTCCTAACGAACAAAGACGTGTGCGTGGAAGCTGTGACGGG
TTCGGGAAAAACACTGGCCTTCGTTGTCCCCGCGGTGGAGATGATCCTGC
GCAGGGAGACCGAACTCAAGCGCAACCAGATCGGTGTCATCATCCTAACA
CCGACCAGATCCCGTTGTTCCTAACGAACAAAGACGTGTGCGTGGAAGCT
GTGACGGGTTCGGGAAAAACACTGGCCTTCGTTGTCCCCGCGGTGGAGAT
GATCCTGCGCAGGGAGACCGAACTCAAGCGCAACCAGATCGGTGTCATCA
TCCTAACACCGACCAGGGAGCTCGCCAACCAAATATTCGGCGTCGTCTCG
AAATTCGCCGAGCTACTCGATGAGGCCAGACCTCTGCTCCTCGTCGGTGG
TACTAGCGTCGAGGATTGTCTTGCAGCTTTCAGGAAAGGCGGTGCGGGCA
TCTTGGTGGGCACCCCGGGAAGGGTGGAGGACATGCTAAACAACTATAGC
GTGTTCGACGCGCGTGGGAGCTCGCCAACCAAATATTCGGCGTCGTCTCG
AAATTCGCCGAGCTACTCGATGAGGCCAGACCTCTGCTCCTCGTCGGTGG
TACTAGCGTCGAGGATTGTCTTGCAGCTTTCAGGAAAGGCGGTGCGGGCA
TCTTGGTGGGCACCCCGGGAAGGGTGGAGGACATGCTAAACAACTATAGC
GTGTTCGACGCGCGTGAGTTGGAAGCTTTGATCCTGGACGAGGCAGATAC
CCTACTCGACATGGGCTTCGCAGGCACGTTGAACTCGATTTTCGCCCTGC
TGCCCAAACAGCGGAGGACGGGTCTTTTCTCAGCTACCCAGACGCGGTGA
AGTTGGAAGCTTTGATCCTGGACGAGGCAGATACCCTACTCGACATGGGC
TTCGCAGGCACGTTGAACTCGATTTTCGCCCTGCTGCCCAAACAGCGGAG
GACGGGTCTTTTCTCAGCTACCCAGACGCGGTGA
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