mRNA_H-paniculata_contig2489.6761.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: D7FNT6_ECTSI (Derlin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT6_ECTSI) HSP 1 Score: 181 bits (460), Expect = 3.820e-54 Identity = 91/144 (63.19%), Postives = 110/144 (76.39%), Query Frame = 1
Query: 10 RYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKILGWDVPRSGVHRQA 441
RYE D F+ GGGGGSAD+A+ML+FG IE L LF+ P +A++FY+ YVWSRKNP MSVS WGIIINA+Y+PWV + + +++G F+ LLGIA GHLFYFLVDVLPDLHDIDLL+TPQFLV +LGW SGV QA
Sbjct: 110 RYEKDGFSMGGGGGSADYAYMLLFGFVGIETSLLLLFYQPFMIFTTAIMFYICYVWSRKNPGMSVSFWGIIINALYVPWVMVALRVVLGHSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGHEGSGVTMQA 253
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A6H5KW67_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW67_9PHAE) HSP 1 Score: 177 bits (450), Expect = 6.570e-54 Identity = 91/151 (60.26%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 10 RYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKILGWDVPRSGVHRQAPNQNNAA 462
RYE D F+ GGGGGSAD+A+ML+FG IE L LF+ P A++FY+ YVWSRKNP MSVS WGI INA+Y+PWV + + + +G F+ LLGIA GHLFYFLVDVLPDLH+IDLL+TPQFLV +LGW SGV QA AA
Sbjct: 10 RYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGIHINALYVPWVMIAMRVAIGASIFMALLGIAVGHLFYFLVDVLPDLHEIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAA 160
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A835YYA5_9STRA (Derlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA5_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.510e-37 Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 1 YRRRYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKILGWDVPRSGVHR 435
Y RYE DAF+TGGGGGSAD+A+ML FG+A + + L F P F+ ++F ++YVWSRK P + S WGI + +VY+PWV + ++L G F PLLGI GHL+YFLVDV+PD D+L TP FL + G+ +GV R
Sbjct: 91 YSIRYEKDAFDTGGGGGSADYAWMLAFGMAVLSGLSLAFFVVP--FLSIPLMFMIIYVWSRKVPDVPTSFWGITVQSVYVPWVMVAFNLLTGASAFNPLLGIGVGHLYYFLVDVVPDQFGKDVLTTPAFLTDLFGYGGLNTGVQR 233
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A7S2XX42_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX42_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.330e-31 Identity = 61/138 (44.20%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 1 YRRRYEMDA-FNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVS-VWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKILGW 408
Y +YE FNTGGGGG +D+AFM++FG+ + II +F F+ ++F+VMYVWSR+ P ++VS ++G+ I ++Y PW ++ IL+G PF+ LLGIA GHL+YFL +++PD +D ++L+TP F++ G+
Sbjct: 88 YSEKYETGGCFNTGGGGGVSDYAFMMMFGMVVMNIIG---YFMNTPFMAQPLVFFVMYVWSRRFPDLTVSFMFGVKIQSIYAPWAYVAFQILLGNSPFMALLGIAVGHLYYFLAEIVPDQYDFEILKTPVFMIHYFGY 222
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A482RVM1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVM1_9ARCH) HSP 1 Score: 116 bits (291), Expect = 2.050e-29 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 7 RRYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIF--FVFSAVLFYV-MYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKILGW 408
+RYE + FNTG GG SADF ++L+ + + ++ A IF +V S L YV MYVWSR+ P +++WG A+Y+PWV++ I ++MGG PL+G+A GHL+YFLV VLP H +DL++TP+F V I+ +
Sbjct: 85 KRYESNPFNTGAGGNSADFLWLLLIAMTVLLVL------AYIFDMYVLSEPLLYVIMYVWSRREPDAMLNIWGFRFKALYLPWVYIAIRMVMGGAITEPLIGVAVGHLYYFLVQVLPATHGVDLIKTPKFCVDIVKY 215
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: K3W7V3_GLOUD (Derlin n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7V3_GLOUD) HSP 1 Score: 112 bits (280), Expect = 1.200e-27 Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 1
Query: 1 YRRRYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKI 399
Y R E D F GGGG +AD+AFML FG + +I FF + F+ SA++F ++YVWSR+NP++ V++WG +Y+PW + +LMGG P + + G+ +GHL+YFL++VLP +LL+TP F +
Sbjct: 80 YSSRLEEDPF-PGGGGPTADYAFMLFFGACVLWVIA---FFMELPFLGSALIFMIVYVWSRRNPTVPVAIWGFQFQGLYLPWALIAFTVLMGGSPMMDIFGVIAGHLYYFLLEVLPTTKGWNLLQTPSFFATL 208
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A7S1ZMQ5_TRICV (Derlin (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMQ5_TRICV) HSP 1 Score: 110 bits (275), Expect = 5.330e-27 Identity = 61/138 (44.20%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 1 YRRRYEMDA-FNTGGGGGSADFAFMLIFGVAT-IEIIHLTLFFAPIFFVFSA-VLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKILG 405
+ R+YE +NTG GGG+AD+AF L+F V T I HL P+ +F ++F+V+Y+WS+KNP+ + S+WG+ + +Y+P+ +L +++LMG F L GIA GH++YFLVDV+P ++ D+L TPQFL+ G
Sbjct: 89 FSRQYESGGPYNTGAGGGTADYAFALLFAVVTMIASFHLLRGMMPLAPLFVRNLVFFVLYLWSKKNPTSNSSIWGVPVKGMYLPFAYLALNVLMGNPFFDVLHGIAMGHIYYFLVDVVPIVYGKDVLHTPQFLIDHFG 226
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A5D6YDW5_9STRA (Derlin n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDW5_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.580e-27 Identity = 56/133 (42.11%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 1 YRRRYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKI 399
Y R E D F +GGG +ADFAFML FG + +I FF + F+ S+++F ++YVWSR+NP+M V++WG +Y+PW + +LMGG P + + G+ +GHL+YFL++VLP L++TP F +
Sbjct: 80 YASRLEEDPFPSGGG-PTADFAFMLFFGAVVLWVIA---FFMALPFLGSSLIFMIVYVWSRRNPTMPVAIWGFQFEGLYLPWALIAFTVLMGGNPMMDIFGVIAGHLYYFLLEVLPTTKGWTLIQTPSFFANM 208
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: B8C650_THAPS (Derlin (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C650_THAPS) HSP 1 Score: 107 bits (267), Expect = 3.160e-26 Identity = 58/135 (42.96%), Postives = 95/135 (70.37%), Query Frame = 1
Query: 1 YRRRYEMDAFNTGGGGGSADFAFMLIFGVATIEIIH----LTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLL-GIASGHLFYFLVDVLPDLHDIDLLRTPQFL 390
+ +RYE + +NTG GGG+AD+ F ++FG+A+I + + + L AP+F + F+V+Y WS+++P+ S+WG+ + A+++P+ ++ + +LMG P+ LL GIA GHLFYFLVDV+P ++ D+L TPQFL
Sbjct: 73 FSQRYESEPYNTGAGGGTADYIFAMMFGMASIFLTYPLMGMVLPVAPLFA--RTLTFFVIYTWSKRHPTAPTSIWGVQLKAIHLPFAYVVLSVLMGN-PYGDLLHGIAVGHLFYFLVDVVPIVYGKDVLHTPQFL 204
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Match: A0A8K1CCR7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCR7_PYTOL) HSP 1 Score: 107 bits (266), Expect = 1.040e-25 Identity = 54/133 (40.60%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 1 YRRRYEMDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMYVWSRKNPSMSVSVWGIIINAVYIPWVFLFIHILMGGGPFLPLLGIASGHLFYFLVDVLPDLHDIDLLRTPQFLVKI 399
Y R E D F +GGG +AD+AFM+ FG + II FF + F+ +++F ++YVWSR+NP+ V++WG +Y+PW + +LMGG P + + G+ +GH++YFL++VLP+ +LL+TP F I
Sbjct: 80 YSSRLEEDPFPSGGG-PTADYAFMIFFGACILWIIA---FFMELPFLGPSLIFMIVYVWSRRNPTAPVAIWGFQFQGLYLPWALIAFTVLMGGNPMMDIFGVIAGHMYYFLLEVLPNTKGWNLLQTPSFFANI 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2489.6761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2489.6761.1 >prot_H-paniculata_contig2489.6761.1 ID=prot_H-paniculata_contig2489.6761.1|Name=mRNA_H-paniculata_contig2489.6761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MDAFNTGGGGGSADFAFMLIFGVATIEIIHLTLFFAPIFFVFSAVLFYVMback to top mRNA from alignment at H-paniculata_contig2489:20125..20586- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2489.6761.1 ID=mRNA_H-paniculata_contig2489.6761.1|Name=mRNA_H-paniculata_contig2489.6761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=462bp|location=Sequence derived from alignment at H-paniculata_contig2489:20125..20586- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2489:20125..20586- >mRNA_H-paniculata_contig2489.6761.1 ID=mRNA_H-paniculata_contig2489.6761.1|Name=mRNA_H-paniculata_contig2489.6761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig2489:20125..20586- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |