mRNA_H-paniculata_contig24854.6750.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24854.6750.1
Unique NamemRNA_H-paniculata_contig24854.6750.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY)

HSP 1 Score: 197 bits (501), Expect = 3.580e-54
Identity = 101/223 (45.29%), Postives = 146/223 (65.47%), Query Frame = 1
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 666
            D AGP D  S GG R+ + F+DD+SR   +Y L++KS+AL  L++F+    + +G  +K LRSD+ GEYT K F +FC E+GI  + +A YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + HL++FGC+    +  Q R +LDD+    +F+GYD  S +YR+YNP  K + +SR V +DE D+
Sbjct:  291 DIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 513          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2I0WJT9_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WJT9_9ASPA)

HSP 1 Score: 182 bits (462), Expect = 8.420e-54
Identity = 86/212 (40.57%), Postives = 134/212 (63.21%), Query Frame = 1
Query:   25 SFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEE 660
            S    ++ I+F+DDY+R+  VY L++KS+     K F+  V   +G +IK LRSD+ GE+    F  FC E G++ + +  YTPQ+NGV ER  R+++E+AR+ ++  D+  ++ AEAV +AVY LNR PT+     TP E W+G+ P +DH R+FGC+  V +  Q+R +L++K   G+FLGY   S  Y  +N K + +  SR V++DE+
Sbjct:    5 SLSNYKYFILFIDDYTRMAWVYFLKEKSETFGIFKNFKLLVENQSGQKIKILRSDRGGEFNSCQFEDFCKEEGLEHQLTVAYTPQQNGVTERKNRTVMEMARSMLIAKDIPKKFWAEAVNTAVYVLNRCPTKAVKDITPIEAWSGDKPSVDHFRIFGCLCYVHIPKQKRHKLEEKPDKGIFLGYSSQSKGYIFFNLKTQQLVTSRDVKFDED 216          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 196 bits (497), Expect = 1.170e-53
Identity = 100/223 (44.84%), Postives = 144/223 (64.57%), Query Frame = 1
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 666
            D AGP D  S GG R+ + F+DD+SR   +Y L++KS+AL  LK+F+    + +G  +K LRSD+ GEYT K F +FC E+GI  + +A YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + H ++FGC+    +    R +LDD+    +F+GYD  S +YR+YNP  K + +SR V +DE D+
Sbjct:  396 DIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 618          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 196 bits (497), Expect = 1.250e-53
Identity = 100/223 (44.84%), Postives = 145/223 (65.02%), Query Frame = 1
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 666
            D AGP D  S GG R+ + F+DD+SR   +Y L++KS+AL  L++F+    + +G  +K LRSD+ GEYT K F +FC E+GI  + +  YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + HL++FGC+    +  Q R +LDD+    +F+GYD  S +YR+YNP  K + +SR V +DE D+
Sbjct: 1317 DIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 1539          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI)

HSP 1 Score: 191 bits (485), Expect = 5.140e-53
Identity = 92/222 (41.44%), Postives = 149/222 (67.12%), Query Frame = 1
Query:    1 DRAGPV-DKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEED 663
            D  GP+  ++ GG ++ ++FVDDYSR+  VY L+ KS+A     KF+  V +  G  +K LR+D+ GE+T   F Q+C ++GI +E +A YTP++NGVAER  R+I+E+AR+ + +  + + + AEAV +AVY +N +PT+     TPYE W+G+ P ++HL++FGC+V V++   +R +L++K+   +F+GY   S +YR+YNP    V +SR   ++EED
Sbjct:  355 DLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYNPATGKVIVSRNTVFNEED 576          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2G2VUS6_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VUS6_CAPBA)

HSP 1 Score: 189 bits (481), Expect = 1.690e-51
Identity = 100/223 (44.84%), Postives = 140/223 (62.78%), Query Frame = 1
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 666
            D AGP D  S GG R+ + F+DD+SR   VY L++KS+ L   K+F+  V + +G  +K LRSD+ GEYT   F  F  E+GI  + +  YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + HL++FGC+    +  Q R +LDD+    +F+GYD  S +YR YNP  K V +SR V +DE D+
Sbjct:  849 DLAGPFDIPSLGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFKAMVEKQSGYYVKILRSDRGGEYTANLFEDFVKEHGIIHQLTVRYTPQQNGVAERKNRTILDLARSMVKGKHLPRNFWAEAVRCAVYLLNRCPTKSVRYMTPNEAWSGQKPGVGHLKIFGCIAYSHVPEQLRKKLDDRGEKCIFIGYDERSKAYRFYNPLTKKVIISRDVEFDEADY 1071          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A151TPH7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TPH7_CAJCA)

HSP 1 Score: 177 bits (448), Expect = 7.350e-50
Identity = 91/220 (41.36%), Postives = 139/220 (63.18%), Query Frame = 1
Query:    1 DRAGPV-DKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDE 657
            D  GP+   S    R+ I+F+DD+SR+  VY +++KS+    LKKF+  V + +G +IK LRSD+  EYT   F +FC + GI+Q+ +  Y+PQ+NGV+ER  R+++E+AR+ +    + + + AE V +AVY LNR PTR     T  E W+G+ P   HLRVFG +  + +  ++R +L+DK   G+FLGY + S  YR+YN + K + +SR V  DE
Sbjct:  103 DICGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKEKSEVFGILKKFKTLVEKQSGKQIKVLRSDRGKEYTSHEFDKFCEDEGIEQKLTVSYSPQQNGVSERKNRTVMEMARSMLKEKGLPNTFWAEVVYTAVYILNRCPTRTVQDKTLIEAWSGKKPSTKHLRVFGSICYIHVLEEKRHKLEDKIVRGIFLGYSIQSKGYRVYNLQTKKLIISRDVEVDE 322          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A5N6P097_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P097_9ASTR)

HSP 1 Score: 180 bits (456), Expect = 9.960e-50
Identity = 94/220 (42.73%), Postives = 135/220 (61.36%), Query Frame = 1
Query:    1 DRAGPVDKSF-GGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDE 657
            D  GP+  S  GG +F  + VDDYSR   VY L+ K +A    KKF+  V + N  ++  LR+D+ GE+  K F QFC ++GIK++ +A YTPQ+NGV ER  R+I+EV R+ + T ++      EAVR AVY LNR  TR     TPYE W G+ P + HLRVFGC+  V       G+L D++   V+LG ++ S +YR+ NP+   + ++R V++DE
Sbjct:  221 DLCGPITPSIMGGNKFFFLLVDDYSRYMWVYLLKSKDEAFLNFKKFKATVEKENEHKVGTLRTDRGGEFGSKEFFQFCEDHGIKRQLTAPYTPQQNGVVERRNRTIMEVTRSFLKTMEVPETLWGEAVRHAVYILNRVSTRSVKDQTPYECWRGKKPVIHHLRVFGCVGYVKKVRVSLGKLSDRSTAMVYLGAEIGSKAYRMLNPRTGRICVTRDVKFDE 440          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2Z6LTJ1_TRISU (Integrase catalytic domain-containing protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LTJ1_TRISU)

HSP 1 Score: 181 bits (460), Expect = 4.920e-49
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 1
Query:    1 DRAGPV-DKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDE 657
            D  GP+   S    R+ I+F+DD+SR+  VY +++KS+     KKF+  V + +G  IK LRSD+  EY    F +FC + GI+Q+ +  Y+PQ+NG++ER  R+++E+AR+ M    + + + AEAV +AVY LNR PT+     TP E W G+ P   HLRVFG +  + +  Q+R +L+DK   G+FLGY   S  YRIYN + K + +SR V  DE
Sbjct:  475 DVCGPMRTPSLNNSRYFILFIDDFSRMTWVYFIKEKSEVFGIFKKFKALVEKQSGKNIKMLRSDRGKEYNSHEFDKFCEDEGIEQQLTVAYSPQQNGMSERKNRTVMEMARSMMKDKGLPNTFWAEAVYTAVYILNRCPTKAVQDKTPIETWCGKKPSAKHLRVFGSICYIHVPKQKRHKLEDKTTKGIFLGYSTQSKGYRIYNLQTKKLDVSRDVEVDE 694          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A061F4C8_THECC (Integrase catalytic domain-containing protein n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F4C8_THECC)

HSP 1 Score: 175 bits (444), Expect = 5.580e-49
Identity = 89/221 (40.27%), Postives = 139/221 (62.90%), Query Frame = 1
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEE 660
            D  GP+D +SFGG ++ ++F+DDYS+   V+ L+ K +     KKF+ +V   +G  I  L +D+ GE+    F  FC E GI++E SA YTP++NG A+R  R+I+E+A + +V   + +++ AEAV +  Y LN  PTR     TPYE W G  P + +LRVFGC+   +++ Q + +LD+K+   +FLGY   S +YR+YN KN  + +SR V ++E+
Sbjct:  159 DLCGPMDTESFGGSKYFLLFIDDYSQKIWVFFLKFKFETFDNFKKFKTEVENQSGCNINVLSTDRGGEFVSNEFNNFCEEQGIRRELSAPYTPKQNGAAKRKNRTIVEMATSLLVAKGLPNQFRAEAVATTAYLLNVFPTRAVLNCTPYEAWRGMRPWVSYLRVFGCIAYALVKSQTQHKLDEKSEKCIFLGYSSQSKAYRLYNSKNGKIIISRDVIFNED 379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3ACL1_HIBSY3.580e-5445.29Putative cyclic nucleotide-gated ion channel 8 n=1... [more]
A0A2I0WJT9_9ASPA8.420e-5440.57Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A2WSU7_HIBSY1.170e-5344.84Integrase catalytic domain-containing protein n=2 ... [more]
A0A6A2WXP0_HIBSY1.250e-5344.84Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A2Z7BCE9_9LAMI5.140e-5341.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G2VUS6_CAPBA1.690e-5144.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A151TPH7_CAJCA7.350e-5041.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6P097_9ASTR9.960e-5042.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z6LTJ1_TRISU4.920e-4941.82Integrase catalytic domain-containing protein n=2 ... [more]
A0A061F4C8_THECC5.580e-4940.27Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24854contigH-paniculata_contig24854:487..1209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score179.1
Seed ortholog evalue2.5e-42
Seed eggNOG ortholog3659.XP_004149950.1
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.Pentatricopeptide repeat-containing protein
EggNOG OGs37K71@33090,3GFIF@35493,4JGHT@91835,COG2801@1,KOG0017@2759,KOG4197@1,KOG4197@2759
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Exons1
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929726.3630297-CDS-H-paniculata_contig24854:486..12091622929726.3630297-CDS-H-paniculata_contig24854:486..1209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24854 487..1209 -
1691480984.4481168-CDS-H-paniculata_contig24854:486..12091691480984.4481168-CDS-H-paniculata_contig24854:486..1209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24854 487..1209 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24854.6750.1prot_H-paniculata_contig24854.6750.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24854 487..1209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24854.6750.1

>prot_H-paniculata_contig24854.6750.1 ID=prot_H-paniculata_contig24854.6750.1|Name=mRNA_H-paniculata_contig24854.6750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
DRAGPVDKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVA
RANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAER
SWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEK
WNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYR
IYNPKNKSVQLSRKVRYDEEDFVTGHRGQQEHEGTRNMEVV
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mRNA from alignment at H-paniculata_contig24854:487..1209-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24854.6750.1 ID=mRNA_H-paniculata_contig24854.6750.1|Name=mRNA_H-paniculata_contig24854.6750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=723bp|location=Sequence derived from alignment at H-paniculata_contig24854:487..1209- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCGAGCCGGACCGGTGGACAAGTCCTTCGGAGGATGTCGATTCGCCAT CATCTTCGTCGACGACTACAGCAGAATACGCAAAGTTTATACCTTGCGAA AAAAATCGAAGGCGCTATGGGCCCTGAAGAAATTCGAGAGAGACGTAGCG AGGGCTAACGGTTTGCGGATTAAGCGCCTTCGGTCGGATCAGAGAGGAGA ATATACTGGGAAGCCCTTTAGGCAATTCTGCGCGGAAAATGGCATCAAGC AGGAGTTCTCAGCCGTCTACACACCGCAACGAAACGGTGTGGCGGAGCGC AGCTGGCGCAGCATTTTGGAGGTGGCAAGAGCCAGCATGGTCACCGCCGA CATGGGTCATCGATATTGTGCGGAAGCGGTACGCTCGGCAGTGTATTACC TAAATCGCGCCCCGACGCGACCGCACAACGGAGGAACGCCGTACGAAAAA TGGAACGGCGAGACACCAAAGTTGGACCACCTTCGCGTCTTCGGCTGCAT GGTGTGTGTCATGCTCCAGTTGCAGCAGAGAGGCCAGCTCGACGACAAAG CATGGACGGGGGTATTTCTGGGGTACGACGTGGACAGTCCAAGTTATCGC ATATATAACCCGAAAAACAAGAGCGTCCAGTTGAGCAGGAAAGTGAGATA TGATGAAGAGGACTTCGTCACGGGTCATCGCGGACAGCAGGAACACGAAG GGACGCGAAACATGGAAGTTGTT
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Coding sequence (CDS) from alignment at H-paniculata_contig24854:487..1209-

>mRNA_H-paniculata_contig24854.6750.1 ID=mRNA_H-paniculata_contig24854.6750.1|Name=mRNA_H-paniculata_contig24854.6750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig24854:487..1209- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCGAGCCGGACCGGTGGACAAGTCCTTCGGAGGATGTCGATTCGCCAT
CATCTTCGTCGACGACTACAGCAGAATACGCAAAGTTTATACCTTGCGAA
AAAAATCGAAGGCGCTATGGGCCCTGAAGAAATTCGAGAGAGACGTAGCG
AGGGCTAACGGTTTGCGGATTAAGCGCCTTCGGTCGGATCAGAGAGGAGA
ATATACTGGGAAGCCCTTTAGGCAATTCTGCGCGGAAAATGGCATCAAGC
AGGAGTTCTCAGCCGTCTACACACCGCAACGAAACGGTGTGGCGGAGCGC
AGCTGGCGCAGCATTTTGGAGGTGGCAAGAGCCAGCATGGTCACCGCCGA
CATGGGTCATCGATATTGTGCGGAAGCGGTACGCTCGGCAGTGTATTACC
TAAATCGCGCCCCGACGCGACCGCACAACGGAGGAACGCCGTACGAAAAA
TGGAACGGCGAGACACCAAAGTTGGACCACCTTCGCGTCTTCGGCTGCAT
GGTGTGTGTCATGCTCCAGTTGCAGCAGAGAGGCCAGCTCGACGACAAAG
CATGGACGGGGGTATTTCTGGGGTACGACGTGGACAGTCCAAGTTATCGC
ATATATAACCCGAAAAACAAGAGCGTCCAGTTGAGCAGGAAAGTGAGATA
TGATGAAGAGGACTTCGTCACGGGTCATCGCGGACAGCAGGAACACGAAG
GGACGCGAAACATGGAAGTTGTTGACCGAGCCGGACCGGTGGACAAGTCC
TTCGGAGGATGTCGATTCGCCATCATCTTCGTCGACGACTACAGCAGAAT
ACGCAAAGTTTATACCTTGCGAAAAAAATCGAAGGCGCTATGGGCCCTGA
AGAAATTCGAGAGAGACGTAGCGAGGGCTAACGGTTTGCGGATTAAGCGC
CTTCGGTCGGATCAGAGAGGAGAATATACTGGGAAGCCCTTTAGGCAATT
CTGCGCGGAAAATGGCATCAAGCAGGAGTTCTCAGCCGTCTACACACCGC
AACGAAACGGTGTGGCGGAGCGCAGCTGGCGCAGCATTTTGGAGGTGGCA
AGAGCCAGCATGGTCACCGCCGACATGGGTCATCGATATTGTGCGGAAGC
GGTACGCTCGGCAGTGTATTACCTAAATCGCGCCCCGACGCGACCGCACA
ACGGAGGAACGCCGTACGAAAAATGGAACGGCGAGACACCAAAGTTGGAC
CACCTTCGCGTCTTCGGCTGCATGGTGTGTGTCATGCTCCAGTTGCAGCA
GAGAGGCCAGCTCGACGACAAAGCATGGACGGGGGTATTTCTGGGGTACG
ACGTGGACAGTCCAAGTTATCGCATATATAACCCGAAAAACAAGAGCGTC
CAGTTGAGCAGGAAAGTGAGATATGATGAAGAGGACTTCGTCACGGGTCA
TCGCGGACAGCAGGAACACGAAGGGACGCGAAACATGGAAGTTGTT
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