prot_H-paniculata_contig24854.6750.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24854.6750.1
Unique Nameprot_H-paniculata_contig24854.6750.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length241
Homology
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY)

HSP 1 Score: 197 bits (501), Expect = 3.580e-54
Identity = 101/223 (45.29%), Postives = 146/223 (65.47%), Query Frame = 0
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 222
            D AGP D  S GG R+ + F+DD+SR   +Y L++KS+AL  L++F+    + +G  +K LRSD+ GEYT K F +FC E+GI  + +A YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + HL++FGC+    +  Q R +LDD+    +F+GYD  S +YR+YNP  K + +SR V +DE D+
Sbjct:  291 DIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 513          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2I0WJT9_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WJT9_9ASPA)

HSP 1 Score: 182 bits (462), Expect = 8.420e-54
Identity = 86/212 (40.57%), Postives = 134/212 (63.21%), Query Frame = 0
Query:    9 SFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEE 220
            S    ++ I+F+DDY+R+  VY L++KS+     K F+  V   +G +IK LRSD+ GE+    F  FC E G++ + +  YTPQ+NGV ER  R+++E+AR+ ++  D+  ++ AEAV +AVY LNR PT+     TP E W+G+ P +DH R+FGC+  V +  Q+R +L++K   G+FLGY   S  Y  +N K + +  SR V++DE+
Sbjct:    5 SLSNYKYFILFIDDYTRMAWVYFLKEKSETFGIFKNFKLLVENQSGQKIKILRSDRGGEFNSCQFEDFCKEEGLEHQLTVAYTPQQNGVTERKNRTVMEMARSMLIAKDIPKKFWAEAVNTAVYVLNRCPTKAVKDITPIEAWSGDKPSVDHFRIFGCLCYVHIPKQKRHKLEEKPDKGIFLGYSSQSKGYIFFNLKTQQLVTSRDVKFDED 216          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 196 bits (497), Expect = 1.170e-53
Identity = 100/223 (44.84%), Postives = 144/223 (64.57%), Query Frame = 0
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 222
            D AGP D  S GG R+ + F+DD+SR   +Y L++KS+AL  LK+F+    + +G  +K LRSD+ GEYT K F +FC E+GI  + +A YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + H ++FGC+    +    R +LDD+    +F+GYD  S +YR+YNP  K + +SR V +DE D+
Sbjct:  396 DIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 618          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 196 bits (497), Expect = 1.250e-53
Identity = 100/223 (44.84%), Postives = 145/223 (65.02%), Query Frame = 0
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 222
            D AGP D  S GG R+ + F+DD+SR   +Y L++KS+AL  L++F+    + +G  +K LRSD+ GEYT K F +FC E+GI  + +  YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + HL++FGC+    +  Q R +LDD+    +F+GYD  S +YR+YNP  K + +SR V +DE D+
Sbjct: 1317 DIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 1539          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI)

HSP 1 Score: 191 bits (485), Expect = 5.140e-53
Identity = 92/222 (41.44%), Postives = 149/222 (67.12%), Query Frame = 0
Query:    1 DRAGPV-DKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEED 221
            D  GP+  ++ GG ++ ++FVDDYSR+  VY L+ KS+A     KF+  V +  G  +K LR+D+ GE+T   F Q+C ++GI +E +A YTP++NGVAER  R+I+E+AR+ + +  + + + AEAV +AVY +N +PT+     TPYE W+G+ P ++HL++FGC+V V++   +R +L++K+   +F+GY   S +YR+YNP    V +SR   ++EED
Sbjct:  355 DLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYNPATGKVIVSRNTVFNEED 576          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2G2VUS6_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VUS6_CAPBA)

HSP 1 Score: 189 bits (481), Expect = 1.690e-51
Identity = 100/223 (44.84%), Postives = 140/223 (62.78%), Query Frame = 0
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEEDF 222
            D AGP D  S GG R+ + F+DD+SR   VY L++KS+ L   K+F+  V + +G  +K LRSD+ GEYT   F  F  E+GI  + +  YTPQ+NGVAER  R+IL++AR+ +    +   + AEAVR AVY LNR PT+     TP E W+G+ P + HL++FGC+    +  Q R +LDD+    +F+GYD  S +YR YNP  K V +SR V +DE D+
Sbjct:  849 DLAGPFDIPSLGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFKAMVEKQSGYYVKILRSDRGGEYTANLFEDFVKEHGIIHQLTVRYTPQQNGVAERKNRTILDLARSMVKGKHLPRNFWAEAVRCAVYLLNRCPTKSVRYMTPNEAWSGQKPGVGHLKIFGCIAYSHVPEQLRKKLDDRGEKCIFIGYDERSKAYRFYNPLTKKVIISRDVEFDEADY 1071          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A151TPH7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TPH7_CAJCA)

HSP 1 Score: 177 bits (448), Expect = 7.350e-50
Identity = 91/220 (41.36%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 DRAGPV-DKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDE 219
            D  GP+   S    R+ I+F+DD+SR+  VY +++KS+    LKKF+  V + +G +IK LRSD+  EYT   F +FC + GI+Q+ +  Y+PQ+NGV+ER  R+++E+AR+ +    + + + AE V +AVY LNR PTR     T  E W+G+ P   HLRVFG +  + +  ++R +L+DK   G+FLGY + S  YR+YN + K + +SR V  DE
Sbjct:  103 DICGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKEKSEVFGILKKFKTLVEKQSGKQIKVLRSDRGKEYTSHEFDKFCEDEGIEQKLTVSYSPQQNGVSERKNRTVMEMARSMLKEKGLPNTFWAEVVYTAVYILNRCPTRTVQDKTLIEAWSGKKPSTKHLRVFGSICYIHVLEEKRHKLEDKIVRGIFLGYSIQSKGYRVYNLQTKKLIISRDVEVDE 322          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A5N6P097_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P097_9ASTR)

HSP 1 Score: 180 bits (456), Expect = 9.960e-50
Identity = 94/220 (42.73%), Postives = 135/220 (61.36%), Query Frame = 0
Query:    1 DRAGPVDKSF-GGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDE 219
            D  GP+  S  GG +F  + VDDYSR   VY L+ K +A    KKF+  V + N  ++  LR+D+ GE+  K F QFC ++GIK++ +A YTPQ+NGV ER  R+I+EV R+ + T ++      EAVR AVY LNR  TR     TPYE W G+ P + HLRVFGC+  V       G+L D++   V+LG ++ S +YR+ NP+   + ++R V++DE
Sbjct:  221 DLCGPITPSIMGGNKFFFLLVDDYSRYMWVYLLKSKDEAFLNFKKFKATVEKENEHKVGTLRTDRGGEFGSKEFFQFCEDHGIKRQLTAPYTPQQNGVVERRNRTIMEVTRSFLKTMEVPETLWGEAVRHAVYILNRVSTRSVKDQTPYECWRGKKPVIHHLRVFGCVGYVKKVRVSLGKLSDRSTAMVYLGAEIGSKAYRMLNPRTGRICVTRDVKFDE 440          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A2Z6LTJ1_TRISU (Integrase catalytic domain-containing protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LTJ1_TRISU)

HSP 1 Score: 181 bits (460), Expect = 4.920e-49
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 0
Query:    1 DRAGPV-DKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDE 219
            D  GP+   S    R+ I+F+DD+SR+  VY +++KS+     KKF+  V + +G  IK LRSD+  EY    F +FC + GI+Q+ +  Y+PQ+NG++ER  R+++E+AR+ M    + + + AEAV +AVY LNR PT+     TP E W G+ P   HLRVFG +  + +  Q+R +L+DK   G+FLGY   S  YRIYN + K + +SR V  DE
Sbjct:  475 DVCGPMRTPSLNNSRYFILFIDDFSRMTWVYFIKEKSEVFGIFKKFKALVEKQSGKNIKMLRSDRGKEYNSHEFDKFCEDEGIEQQLTVAYSPQQNGMSERKNRTVMEMARSMMKDKGLPNTFWAEAVYTAVYILNRCPTKAVQDKTPIETWCGKKPSAKHLRVFGSICYIHVPKQKRHKLEDKTTKGIFLGYSTQSKGYRIYNLQTKKLDVSRDVEVDE 694          
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Match: A0A061F4C8_THECC (Integrase catalytic domain-containing protein n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F4C8_THECC)

HSP 1 Score: 175 bits (444), Expect = 5.580e-49
Identity = 89/221 (40.27%), Postives = 139/221 (62.90%), Query Frame = 0
Query:    1 DRAGPVD-KSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVARANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAERSWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEKWNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYRIYNPKNKSVQLSRKVRYDEE 220
            D  GP+D +SFGG ++ ++F+DDYS+   V+ L+ K +     KKF+ +V   +G  I  L +D+ GE+    F  FC E GI++E SA YTP++NG A+R  R+I+E+A + +V   + +++ AEAV +  Y LN  PTR     TPYE W G  P + +LRVFGC+   +++ Q + +LD+K+   +FLGY   S +YR+YN KN  + +SR V ++E+
Sbjct:  159 DLCGPMDTESFGGSKYFLLFIDDYSQKIWVFFLKFKFETFDNFKKFKTEVENQSGCNINVLSTDRGGEFVSNEFNNFCEEQGIRRELSAPYTPKQNGAAKRKNRTIVEMATSLLVAKGLPNQFRAEAVATTAYLLNVFPTRAVLNCTPYEAWRGMRPWVSYLRVFGCIAYALVKSQTQHKLDEKSEKCIFLGYSSQSKAYRLYNSKNGKIIISRDVIFNED 379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24854.6750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3ACL1_HIBSY3.580e-5445.29Putative cyclic nucleotide-gated ion channel 8 n=1... [more]
A0A2I0WJT9_9ASPA8.420e-5440.57Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A2WSU7_HIBSY1.170e-5344.84Integrase catalytic domain-containing protein n=2 ... [more]
A0A6A2WXP0_HIBSY1.250e-5344.84Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A2Z7BCE9_9LAMI5.140e-5341.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G2VUS6_CAPBA1.690e-5144.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A151TPH7_CAJCA7.350e-5041.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6P097_9ASTR9.960e-5042.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z6LTJ1_TRISU4.920e-4941.82Integrase catalytic domain-containing protein n=2 ... [more]
A0A061F4C8_THECC5.580e-4940.27Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 15..105
e-value: 7.7E-19
score: 68.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..155
score: 19.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..166
e-value: 7.9E-27
score: 95.7
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 41..224
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 41..224
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24854contigH-paniculata_contig24854:487..1209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24854.6750.1mRNA_H-paniculata_contig24854.6750.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24854 487..1209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24854.6750.1 ID=prot_H-paniculata_contig24854.6750.1|Name=mRNA_H-paniculata_contig24854.6750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
DRAGPVDKSFGGCRFAIIFVDDYSRIRKVYTLRKKSKALWALKKFERDVA
RANGLRIKRLRSDQRGEYTGKPFRQFCAENGIKQEFSAVYTPQRNGVAER
SWRSILEVARASMVTADMGHRYCAEAVRSAVYYLNRAPTRPHNGGTPYEK
WNGETPKLDHLRVFGCMVCVMLQLQQRGQLDDKAWTGVFLGYDVDSPSYR
IYNPKNKSVQLSRKVRYDEEDFVTGHRGQQEHEGTRNMEVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf