mRNA_H-paniculata_contig2478.6726.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2478.6726.1
Unique NamemRNA_H-paniculata_contig2478.6726.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A6H5JYA8_9PHAE (Sm domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYA8_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.170e-45
Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 1 
Query:  283 APAQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            APAQTG  K+SPSDFLKTVLGRPVVVKLNSGIDYRGVL CLDGYMNIAMEQTEEYVNGQLKA +GDCFIRGNNVLYISTQ+RR
Sbjct:   63 APAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 145
[Close]
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A7S2ATC3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATC3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 6.110e-42
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1 
Query:  256 TVAQAIAVAAPAQTGSTKK-SPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            T A A +  A   T S+KK  PSDFLKTVLGRPVVVKLNSG DYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYIS  +RR
Sbjct:   15 TAAPANSTPANTVTSSSKKCQPSDFLKTVLGRPVVVKLNSGTDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISASRRR 107
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BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A7S2IZG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZG2_9EUKA)

HSP 1 Score: 148 bits (373), Expect = 7.890e-42
Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 1 
Query:  274 AVAAPAQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            A AAPA     K +PSDFLKTVLGRPVVVKLNSG+DYRGVLACLDGYMNIAMEQTEEYV+GQLKAKYGD FIRGNNVLYISTQKRR
Sbjct:   23 APAAPA----AKSNPSDFLKTVLGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVDGQLKAKYGDTFIRGNNVLYISTQKRR 104
[Close]
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A836CMP0_9STRA (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.140e-41
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1 
Query:  289 AQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            A+  S  KSPSDFLK VLGR V+VKLNSG+DYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYIST KRR
Sbjct:   37 AKAASKVKSPSDFLKGVLGRSVIVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTTKRR 117
[Close]
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A7S2UQ42_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ42_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.040e-41
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 1 
Query:  307 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            K+SPSDFLK+VLGRPV V+LNSG DYRGVLACLDGYMNIAMEQTEEYV+GQLKAKYGDCFIRGNNVLYISTQKRR
Sbjct:   28 KRSPSDFLKSVLGRPVSVRLNSGTDYRGVLACLDGYMNIAMEQTEEYVDGQLKAKYGDCFIRGNNVLYISTQKRR 102
[Close]
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: V4A3S6_LOTGI (Sm domain-containing protein n=19 Tax=Protostomia TaxID=33317 RepID=V4A3S6_LOTGI)

HSP 1 Score: 145 bits (365), Expect = 5.780e-41
Identity = 67/77 (87.01%), Postives = 73/77 (94.81%), Query Frame = 1 
Query:  301 STKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            S K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct:    2 SNKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 78
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BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A251T2L1_HELAN (Putative U6 snRNA-associated Sm-like protein LSm6 n=11 Tax=Pentapetalae TaxID=1437201 RepID=A0A251T2L1_HELAN)

HSP 1 Score: 144 bits (364), Expect = 1.280e-40
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 1 
Query:  277 VAAPAQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKR 528
            VAA  +  ST K+PSDFLK++ GRPVVVKLNSG+DYRG+LACLDGYMNIAMEQTEEYVNGQLK KYGD FIRGNNVLYIST KR
Sbjct:    5 VAAAEKGSSTTKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKR 88
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BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A0U9HK22_KLENI (U6 snRNA-associated Sm-like protein LSm6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK22_KLENI)

HSP 1 Score: 144 bits (362), Expect = 1.640e-40
Identity = 66/74 (89.19%), Postives = 70/74 (94.59%), Query Frame = 1 
Query:  304 TKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQK 525
            T K+P+DFLK + GRPVVVKLNSG+DYRGVLACLDGYMNIAMEQTEEYVNGQLK KYGDCFIRGNNVLYISTQK
Sbjct:    4 TAKTPADFLKAIRGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKNKYGDCFIRGNNVLYISTQK 77
[Close]
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: LSM6_HUMAN (U6 snRNA-associated Sm-like protein LSm6 n=406 Tax=Sarcopterygii TaxID=8287 RepID=LSM6_HUMAN)

HSP 1 Score: 143 bits (361), Expect = 2.380e-40
Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 1 
Query:  307 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct:    5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 79
[Close]
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: K4FT18_CALMI (U6 snRNA-associated Sm-like protein LSm6 n=12 Tax=Vertebrata TaxID=7742 RepID=K4FT18_CALMI)

HSP 1 Score: 143 bits (361), Expect = 2.380e-40
Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 1 
Query:  307 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 531
            K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct:    5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYA8_9PHAE1.170e-4591.57Sm domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2ATC3_9STRA6.110e-4281.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2IZG2_9EUKA7.890e-4287.21Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A836CMP0_9STRA1.140e-4187.65Sm domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S2UQ42_9STRA2.040e-4192.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
V4A3S6_LOTGI5.780e-4187.01Sm domain-containing protein n=19 Tax=Protostomia ... [more]
A0A251T2L1_HELAN1.280e-4082.14Putative U6 snRNA-associated Sm-like protein LSm6 ... [more]
A0A0U9HK22_KLENI1.640e-4089.19U6 snRNA-associated Sm-like protein LSm6 n=1 Tax=K... [more]
LSM6_HUMAN2.380e-4088.00U6 snRNA-associated Sm-like protein LSm6 n=406 Tax... [more]
K4FT18_CALMI2.380e-4088.00U6 snRNA-associated Sm-like protein LSm6 n=12 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2478contigH-paniculata_contig2478:3620..12439 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score142.5
Seed ortholog evalue1.7e-31
Seed eggNOG ortholog10029.XP_007630704.1
Preferred nameLSM6
KEGG koko:K12625
KEGG Pathwayko03018,ko03040,map03018,map03040
KEGG ModuleM00354,M00396,M00397
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000291,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005688,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0022613,GO:0030490,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046540,GO:0046700,GO:0046982,GO:0046983,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990904
EggNOG free text desc.LSM domain
EggNOG OGs35QT9@314146,3A5NM@33154,3BSKH@33208,3D8AQ@33213,3JHAH@40674,48F8H@7711,49C6R@7742,4Q5TD@9989,COG1958@1,KOG1783@2759
Ec32 ortholog descriptionSm-like protein LSm6
Ec32 orthologEc-19_000790.1
COG Functional cat.A
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Exons3
Model size805
Cds size468
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2478.6726.1prot_H-paniculata_contig2478.6726.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2478 3686..12168 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929722.693192-UTR-H-paniculata_contig2478:3619..36851622929722.693192-UTR-H-paniculata_contig2478:3619..3685Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2478 3620..3685 +
1691480982.915728-UTR-H-paniculata_contig2478:3619..36851691480982.915728-UTR-H-paniculata_contig2478:3619..3685Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2478 3620..3685 +
1622929722.7569623-UTR-H-paniculata_contig2478:12168..124391622929722.7569623-UTR-H-paniculata_contig2478:12168..12439Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2478 12169..12439 +
1691480982.9627059-UTR-H-paniculata_contig2478:12168..124391691480982.9627059-UTR-H-paniculata_contig2478:12168..12439Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2478 12169..12439 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929722.713905-CDS-H-paniculata_contig2478:3685..40071622929722.713905-CDS-H-paniculata_contig2478:3685..4007Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2478 3686..4007 +
1691480982.9341292-CDS-H-paniculata_contig2478:3685..40071691480982.9341292-CDS-H-paniculata_contig2478:3685..4007Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2478 3686..4007 +
1622929722.7291431-CDS-H-paniculata_contig2478:8094..82081622929722.7291431-CDS-H-paniculata_contig2478:8094..8208Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2478 8095..8208 +
1691480982.9440076-CDS-H-paniculata_contig2478:8094..82081691480982.9440076-CDS-H-paniculata_contig2478:8094..8208Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2478 8095..8208 +
1622929722.7429707-CDS-H-paniculata_contig2478:12136..121681622929722.7429707-CDS-H-paniculata_contig2478:12136..12168Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2478 12137..12168 +
1691480982.9526439-CDS-H-paniculata_contig2478:12136..121681691480982.9526439-CDS-H-paniculata_contig2478:12136..12168Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2478 12137..12168 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2478.6726.1

>prot_H-paniculata_contig2478.6726.1 ID=prot_H-paniculata_contig2478.6726.1|Name=mRNA_H-paniculata_contig2478.6726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MGDASPPPPPPPPEDRPESAGSNLQEKEDESDRNQNQQASQQKSGQQPAQ
QQDSMPVAAAPGPTVAQAIAVAAPAQTGSTKKSPSDFLKTVLGRPVVVKL
NSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYIS
TQKRR*
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mRNA from alignment at H-paniculata_contig2478:3620..12439+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2478.6726.1 ID=mRNA_H-paniculata_contig2478.6726.1|Name=mRNA_H-paniculata_contig2478.6726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8820bp|location=Sequence derived from alignment at H-paniculata_contig2478:3620..12439+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TATGCTTACTTGCGGCAGGTGTGCTCTGCCGTAGACAATCATCAACTGAA
CTTAGTCTGCCACGGTATGGGAGACGCATCACCGCCGCCACCGCCGCCAC
CACCTGAAGACCGGCCGGAAAGTGCCGGGTCTAATTTACAGGAAAAGGAA
GATGAAAGCGACAGGAATCAAAATCAACAAGCGTCTCAGCAAAAATCTGG
GCAGCAGCCCGCCCAGCAGCAAGACAGCATGCCCGTTGCAGCGGCGCCAG
GGCCTACTGTAGCGCAAGCCATTGCAGTTGCTGCCCCGGCGCAGACAGGA
TCCACAAAGAAGAGTCCGAGCGACTTCTTGAAGACCGTATTGGGACGGCC
GGTGGTGGTCAAGCTAAACTCAGGGATCGACTACAGGGGTGAGGGCAGTC
AACGGCTTTGGGGTTGGTTCTGTTGTGATGGGATTGGGGGGAAAGGTCTG
TCTCAGCTGTACTATACACCAGTTCTTATGACTTTTGATGGGAATGAGAT
CATAGATGAAGTACTCGCATTTTGAAAAAAATATCTCTTTCAAGAAAGTA
CATCAGGTAACATGGACTTTGGAGATGGAGGAAGTGTCGAGGCCGTAAAC
AGTGAAAGCTATTGTTGTTGGTCCCCCGTGATAGCGGATTTACGTGGTGG
CTTCTCCGGGCCTCGCTAGTACGGTAGTCAACGCACCCGCGGACAGGAGA
CAAACACGTAACACAAGCAGCTGGCATTGCGCACACGTTTCAGGTCAGCA
AACCTCTACGATGGTTGGATTTTCAATTGTCGTCCCCTCGGGCCCACATC
AACTGCACTACATACAGTAACCGCAACGCAGAATTTCGTTTCTTGCTCGC
ACCAACCATGCACCCGAAGGGAGTGTTAACAGATACTAAGTGGAAAGACG
CCTACAGGAGCATTAATGGCATCCATCCCCTTTTTGTCTTCGAAGTTACG
AGTTCCTTTGTCGCGAAGGTTTGTTCTCTCAACTACAGTGGTGCAAAAGT
TATTTGCCTTGGTAATAGACGTAGAGTCGCTTTCCTATTTCAAATGTGCT
CACTGATGACCTGGACAGCAACGCCGAAAACTCTGTCGCTACACAACTAT
AGTACCTGAAGGATCTCCGACCTTCTGTACTAGCGAGTCGTCAAGTCACG
AATGTGTGCACCGTATTACCCATGTATACCCGAAGCAACACTATTTTCTA
TAATTTTGTACCTCAACGAGTGAACGCGCCATCTCCGCCGAATCATTGGT
ACCACCAGCTGCCGCATATTTACCTGCGCGCGGACCTGCGCGTATCTACC
GTGTTTTATGTTGTACCAAGTACATAGCTACGCGGGCCTACGTATTGAAT
CATACACTATTCTAGATGCATGTTCATGAAGTCTTCCCTTCGAGCCGTTT
CCAAATCCTAAGGTGCGTCTGTATATTAACTCCAGGCGACGCAGAAGATA
TAGCGGCTATGATCCTGGACGGGCTCCTCGATCCAGCATACCGAACCTTA
TAAAAGAACAAATATACCCTCGCGCTGTCTATAAGCAGGATCGCCCCATC
TCCGTTCTCAAATGCGGTCGTTTTTTGCACGATGCCAAGAAACGTCGGGC
TGGTCAGCACAAGACAAGAAGAAATACCGATTACGCAAATTTTGTAAAAA
CAGACCCCCCGGTTCCTCATGTTGACATTGTATTGTTCGTATTTTTGGCT
CCGACTGCCACGACCTTTTGCACAACAAAGACCCATCTTCGAAATTTCGC
ATTTGGCTCTGTAGCACCCCCAGCATCTCAGCATGGCTACCCGGAGAGAG
CGAAAGTGGGGTGGGGTGGCGGGGGGTGGGGGCGGAGGGGGCGGGCGGGG
CTCTATTGAGCACCCAAAACAAGTTCAGTGCTTCGTAAAGTCCGGTGCGG
CGACGGCCTTGGTGCCCTGGGGCTGCATCCTTGGGGCGGGTGCCCTTCAA
TATACATCTTACCAAATGAACACGAGCTATGAATGTCTTGATAAATCGAC
CTTTTTTTTTCGGTTTATTATAGTTTTCAAAGTAGAGTGGGAAGAAAATG
AAGCAAAATGGGTATTTAATTTGAGTGTCAGTGAGTGGAACGTGGAGAGA
TGGACGGTTTCCCACTTCCATTATCGCCCCAACTGTTGCTGTTGTCCCCA
ATTTGCGTATTGACTTTACACGTTGTCTCGCCTCCCGAGGGCGATCTCGC
GCAGTCGTGTCAACAGGTACCTGTCTATAGCCCCAGTGCCTCGGGAACGA
CCTGCAGTGTTCCCTGGGGTCAGTTCACCAGTTGTCCGAAGGGTCGAGGG
TCCTGTCAGCCTCATTTCGTACAGCTTTAATCGCGTTCGGTTCGGCCTCG
ATGCAGTCGGCTGATTGCAGTCGATTCGCGCTTGCTTCTATGCTTCTGTA
CCGGTTACATGAAACGGTCGAGAGTATTTTAGCATACCCGTCATGAGGCC
GAGCCTTATCGAGAGAGCTGAAAGAAACGATGTTCGATCGATTGCCAGGA
AATCAATTTTGGCTGTAGAGAACCCCGCGATTGGTTCGAAAAATTCTCGG
CACGCCGATTAGTAGTGCTTGTAAACACGCTTTGACGATGCAGAAAATAT
GATTCTATCATACGAAATCGATTGTACGCAGTGAGTCAAGCAAACGTTTC
CAGAAGCGCTCTTGCCCCTTGGAAAACATGGAAGCTGTCCAACGATAATG
ACTTGTGATTGGAAGACGTGGGATCCGAGGCAAGATTAAGCCCCTTCGTG
TCGACCAAGCAGCTAGAGGCGGCCAAAGGCGGTGAAATGCAAAGTGTGAT
GAAGGAACGCCGCACAGTGATTGTGACCATCGTTCTCCCGGGTATATATC
AAACGTAGCCTGAGCCGTAGCTCCTGGGCAGCTGAGCTCCATGTACCGGT
AGGGGGTAGTGTAATCAATTGTATCGATCGCAAAGCCCATGTGCACTCGA
GAAGCACGTCAACATAACCCTCACTGTCTTCAGCAATTACTGTAGTCTGC
GAGAAATCTGGATTGGAATAATGGTTACTTCAGGGCGTTTACGCCGCTTT
CGTCGGTAGTTGGTTTGGATCAAATCAGACCAGACATGAACAGATGTTTT
TGGTGAGCGACAGGCCGTAGTAGAAATAGTCATAAAGCATCTAGTCTTTC
ATGGTATTTGTAATTTTCATGTGAATCGCTGTAGCTCCCCTAGTACAGCC
TGCTTTCCTCCTGTCAACACATGTCTGGCATGTGCAGCGGAGCAAGGGCT
ATCGTTCATGGTAATGCGCCGTGTACGTTTGGCTTTCTGCGTTTTTCTTT
CGTACTGCTTGAGGACTGCATTCGTGGGTGTGGCGTTGAATCAGTCCTCT
CTTTTTCGAATCTGTTGGACTCGTCCTGAACTCAACCATTTTGTAATCGT
CGGTACAAAGTTGGATATCTCCTAGACCCACCTCGGCTTTGCTCCGTGAG
ACAAAAAAAATGATGCCCGAAAAGCGAACAGGAATCGTTTTCGTTGGTGC
AAATCTCTTCCTTTTTTTTGGTGCTGGAGAAGACTCGCCCGTTCCGACCA
GAGGACTTGCCGCAAGTTTAGTCGCACAATTTTTGACCTCGTCGCGGGCA
CGAGTGCTATCTACGCTGTTGTTGGCTGCTGTCAGCTCGTTTTGTCGACA
AGGGCGACGCTTGTGTGTGTGCGGATGAAAATATTGCCGATGCTCTTTCG
TCGTTTTGGTGCCTGCTTGAGGGCATCGTGAAACTCAAAACTGATTGTGT
ACATGGTTGTGTTGGAGGCGATAGTATCTCACTTGCACAAGTATGGTTTA
GACGGAGCGACAAAAGTATCATGTTTTCGGACGTGACGAGAGGGTTGGTT
CTCGCGGTGGCTCATGGTATCATATGCACACACGTGGTCTGTTTTCATTT
CTAGTGCGTATGAAGCTCAGCAATCGGCTGCAATTCTCGCTGTCAGGCCA
CGACATTTCAAGATAGTGCAACTGCAATCGACCTCCTCGTAGTCCCTGCT
TAATTTAAACGCAGATGTGGTCCGCTTATTCACGCCCCATAGTTATGTTC
TGGTTTTTCTGGTACCGTCTCTCTATATCTTGAGTGTGAGTGTAGACACG
TTGTACATTAGTCAGGATTGTATAATCTGAAGGGAATCACCTTGGTGCGA
CGAAAGTTTTGATTTCAACTTGGTATTCTTTGGTGAGTATAAAAGCGGCG
TGAATTTTGAAAGAGGGGCCGCAGGTTGAGCTGCATATACTCCACGTGGG
TTCATTCAAAGTCATACTGTGATGAGGGTTGATCTGGCCGCAATGAGACG
GGTATATATATATCTGGTGTCCCCGAGGAGGGGGTGTCCCGCTGCAGGGA
GTAATTCTGACCCTCCCCCCCCTCGCCTTTTTGATTTAAATGTGCTGATG
AGTGTACTCCCCCTCCATTTTTCGCTTGCTTCGGCATCCTCCGCTCCATT
GCGGATCCCGGTTGATGTCTGTCAGGGGTGCTGGCTTGCTTAGATGGCTA
TATGAATATCGCTATGGAGCAGACAGAGGAGTACGTGAATGGCCAGCTGA
AGGCGAAGTATGGGGATTGCTTCATCCGCGGGAACAATGGTAAGTGAAGG
GCTGTCTATTTACTCATCTACTCATCTATTCATCTATGCATTCATATATA
TACGTATGCACGTCTCAACAAAAATGCGGCAGCAGAGTAACGGCTATGCT
GTGTCACACATATTCATACACGTCCCCCATTTTGAACCAGATGTCAAAGG
GCCCATGCACAAAGAGGTGTTTTACCGCGCTGCCTGAAAAAAAAGAACAA
AAAAGGTGTTGTTCTTCATTTATGTTTCTGGGCGCTTGCATTGCGGCCCG
CGCCTATCTGTTACCGTAACCCGTGTCAAATTGGGCACCGGTAGGGGCTG
GAATTGTCCAAACGCTACTTCCCCTTCGTAACCCAGAGCGGGGTAATGTC
CCTGTGGTGGTGGGGTCGGGCAGTGAGTGAACACGTAGTACGCCACAGCT
AAGCCACCGATATTTTTCGACACTGGTAGGCACCAAAACAATGTGGACAG
TTAGTGTGCACTGTCATTTTCGCTACATATGCATGAAGATTCGTTTTTTG
AAGATAGTCGATATTACCGAATTTGACGCATGTTCCGAAATGGCCTCATT
CTACCTGTAGAGCGTTTTAACCCTCTTTGGTTTTAGCTCTGTCGCTGCTT
CGGAACAGAAAATGTACCTTACAGTCCCGTAGAGGGTGGGAGGGGAGGGG
GGGGAGGGCAATCCTTGTTTTCATCCACCTGGATTTTCGTTCATGAAGTC
AACCCACTTGACACCGTTGAATTATAGCTCTGATGCCCATTAAATACATC
CATTGTACCCATGGAGAGGTTATGCAGTTGTCTTCGAATTTCATAAGTGT
ACACCTATCAGCAAAATTACATCATGAAGGAGAGGGGGCTCCCTTTGTAC
AGGGGCGGGTGTAGGTTTTTCGGCTTCAAGACGCTGGATGAAGACCACAT
ACATATCACGAGTTCGGACCAAATCGAGAGTACTTCGTCTTCCATACATG
AGCCGGCCTGTACTTATTCAAACCATTGAAAGTTTTATCTCTCCCCCGGT
CCTCACGGTCTAGTATTTCCCTCGTCATGGGAATTCCTACAAGTCAATGC
CGTTCCGTATTGTACTGTTCTGTGCTTGATATGACAGACGAAAATTTCAA
ACGTATTATTTTTGTAGGTTAAGCAGAAGCACTTTTATTCTGTATGCCCC
GGACCTCTACGAGCGTGGCGAATACTAAATAATACAAGTACAGGTTGGCG
GGGGGCTGTTCGTGCTTCCCCAAAAGTATGATGTAACCCGGATAGGATTG
GGCAATGACTCGAGAAAGACAGACGAATCTCGTGCAGACGGCGAGGCGTG
GCGGGAATGGCTAAGGCTGGTGGTTTAAAAATCGAATAAATAGGGATGTG
CAATTGTTATTTATGTGTCCCCAAATGCCGAAAAGGTCGGATAAATAGTT
CCAAGGCGTGCATCTAAACGATTCGAAAGTATTTGCATCCGTCTGGGGGT
TGCAATATTTTTGTTGGAGAATGGTCAATATCTGGTATAACTGTCGATAA
GATCAGAGTTAGAGCTGATCACACAGGGTGACCAACGTGGATAGAGCGAA
GGGCACTCTGGATCGTGAGGGTGACTGCTTTCCCGATCATTTTCGTGTGT
TAAAGCATGTTGTATTCTTACGTAGCATGCGGGTGGAAATTTGTCTTATG
GACAACTTTGGTTGTCGTTGATTTAAAAAAAAAAATCGGGTGTGACACGC
GATGTATGATGTTGTTTCTTCTCCATGGATCCATCTATTCAGCAGCCTAG
AGTTTTCCCGCTAAGCCTTCGTCTGTAACGGACAGTTTATTTCTGTGTTT
CGGACAAAAACGTCCAATAGCAGAATCTACTAGGAAAACATGGGGATTTT
TTGGGCGTGTTCGACTTCGGTGCCCCGTTCGTAGACATGAGACGTCAACA
GAGTTGTTTTAGCTAAACACAGACCTCCTAGTACTTGATAGTGGAACGTC
AGTTTGGGCAAACAGCGGTTGACTGCCTGTACGTTTGTTCGTATTTATTG
ATGATATGGTTTCGTCATTTAGCTGCGAGGTCAGGCTGCACAACTTTAGC
CTTTAACCTGTCGTAATGTTTTCGTCTTGTAGGTGCTAGGGGGACTTTCA
GTCAGCTCCGCGTGCGCTCGTTTCACACTGGAGCCCCCCCCATGAGGAGA
TTTATACCAGCCGTGTCCTCTAGACAGAAATGTAGCAGCAAACATTCCGC
CTCGCCTCCCCTCCTCTGATATGTATACAGAGAGAGCTCTCGCCGTTGAC
TGTAGCAGGTTCTATGGGCAGGTTTGAGCTGGGTTTTCGTTTGTTTTGCG
CTATCTCTTGAGTACCATAACAAGGAAAAAGCTCGGGATGGTACAGTTTG
AATTGTGTGTCGGAGAGGTCATAATATTTCCCAAAATTCTGAACCCTTGG
GAGTTCGAACGACGTTGATTCCGATGTAGTTGGTTGTGGTGGATGAATGT
GTGGTTGCCTCAGCTGTCTTGACCTCCTCTATTTGGTCGACTTCTGGATG
ACATCTCAACCTTACCGAGGGGATTCATAAACGTTTGGTTCAAGGCCCTA
ACCCTCCATCCCTCCTTCCCCTTCAGTTCTTTGATTCCTGGAGGCCTGAG
GGGTGGCATCATGTGACACCAGAAATCTCAGTCCCGTGTCACAAGATGGG
AGGGCGGGGGAGGGGGCGTCTTGGGGACGATCGAAATTGTCGTTCGTGGG
TTTGACATCATATCGGTATGTCACACGTACACTACGAAGTGCACAGTATC
ATGTGACAAATAAACATAAAAATATACTCAAATTGGTATCGATCATTTGA
CGCTCGGGGCCAAAGGGGTCGTTTACATTTCAACCATGGCACGTCCAGGG
CTGGCATACTGCAGGCGCAACGCCATGTATTTCTTGTGGAGGCATGAATA
GCTGTCGAGCCTATAGTGCATACATCAGTTCCATCGAGCAATGGCAGCCA
GCTGGACAGCGCGAACGGCGTGGTGCAGTCCGTCAGTAGTGTTTACGCAC
GGGGATGAAAGAAACATTCAGTAGGAAGCATGCGGTACAATTGGTGCAGT
GCTGCAGCACCATATCTGCGCGGTGATACTGTAGTAACGGCAACACAATG
AAGAGAGAGATAGAGAGTTTGGAAGTACCCGCATCTCCCGAGAGTTCTGT
AGTGAGCGATAGCTGCTGCCTGTATGACGTCCTGTGTTGTGTGATGTCAT
TCACCGATAGAGCAAGAGGAAGCCTGTCACAGTCGAGGCAGTTTGAACAT
GACCCAAATGATTACTTAATTGGTAATTCGGCGTTTGGCTTCCTGCAAAA
AGGTTTCTCCTGTCAATATTTCAGCTGTTTTTCCCAGTCAGAAGGTCAAC
AAGCTCGATCGGGTTTTCTTGTTTTCGTATTTCAGTTGTAGGCAAGCTGT
ACTCTTTTGTTGACGTAACCCTTTGCCTCTGTTTGTTGCCCAAGGCTGAT
ATAAAACGGGTTTCAGCGACTTTTACAGCAGTTGGGGGGTGATGCCGAGG
TTAGCGCTAAATCCCTATTCTTGCCGCCCCAGCGATTGCCTGCTGTGGAT
CTCTCGCGCCCGCGGTCAGTGGTCGGGGAAATTGATAATGATGGTGTAAT
ATACGCATTGCATGCCCCACCCCGATGAAAAACAGTGATGATATCTGCGT
CAGGGCGCTCTTGGTGAGCAGTCACATATGAAGCCGGGGGCTAGGGGCTC
GGGGGCTAGGTGCTGGGTGCTGGGTGCTGGGTGCCTGAGCTGAGAGATAT
GTGCTCGCACTGGTTTAATTATTGAAAAAGTGCGGCAAATCTCTAATTTT
GGTGAAAAGCTATCACACATGTTGTACCCCGATCTGGTCTTACTATTTTT
ACTTTAGCCCTTGTGTCCTCTCTCCATAACCCCGCCCGCTGCGCCGTGCC
TATCTCCTTCCTTGCAGTGCTCTACATCAGCACACAAAAGCGAAGGTGAC
CCGCGAGGTAGCAACGCTTCCGTGCACGGTAGCAGTGGGTCTGTGACAAG
CATCCGTCGATTTGTGACTCGGCCAAGCTAGATGGATAAATATTCGATAC
ACTGCAAGTGTGGCCACATGGTTTTTGCAGGCCACTGCTGCACCCTGCAG
TTAGATTGGTCGTGCATTCACATGTAGCAGTAGTGTAGTGTCATCGTTGC
TGTCTTGTCTTGTGTCCGATCTCGTGTGTTGTTTTTGTTGATTGTGATTT
TGTTTTCGGTCGTCTCGCGT
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Coding sequence (CDS) from alignment at H-paniculata_contig2478:3620..12439+

>mRNA_H-paniculata_contig2478.6726.1 ID=mRNA_H-paniculata_contig2478.6726.1|Name=mRNA_H-paniculata_contig2478.6726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at H-paniculata_contig2478:3620..12439+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAGACGCATCACCGCCGCCACCGCCGCCACCACCTGAAGACCGGCC
GGAAAGTGCCGGGTCTAATTTACAGGAAAAGGAAGATGAAAGCGACAGGA
ATCAAAATCAACAAGCGTCTCAGCAAAAATCTGGGCAGCAGCCCGCCCAG
CAGCAAGACAGCATGCCCGTTGCAGCGGCGCCAGGGCCTACTGTAGCGCA
AGCCATTGCAGTTGCTGCCCCGGCGCAGACAGGATCCACAAAGAAGAGTC
CGAGCGACTTCTTGAAGACCGTATTGGGACGGCCGGTGGTGGTCAAGCTA
AACTCAGGGATCGACTACAGGGATGGGAGACGCATCACCGCCGCCACCGC
CGCCACCACCTGAAGACCGGCCGGAAAGTGCCGGGTCTAATTTACAGGAA
AAGGAAGATGAAAGCGACAGGAATCAAAATCAACAAGCGTCTCAGCAAAA
ATCTGGGCAGCAGCCCGCCCAGCAGCAAGACAGCATGCCCGTTGCAGCGG
CGCCAGGGCCTACTGTAGCGCAAGCCATTGCAGTTGCTGCCCCGGCGCAG
ACAGGATCCACAAAGAAGAGTCCGAGCGACTTCTTGAAGACCGTATTGGG
ACGGCCGGTGGTGGTCAAGCTAAACTCAGGGATCGACTACAGGGGGGTGC
TGGCTTGCTTAGATGGCTATATGAATATCGCTATGGAGCAGACAGAGGAG
TACGTGAATGGCCAGCTGAAGGCGAAGTATGGGGATTGCTTCATCCGCGG
GAACAATGGGGTGCTGGCTTGCTTAGATGGCTATATGAATATCGCTATGG
AGCAGACAGAGGAGTACGTGAATGGCCAGCTGAAGGCGAAGTATGGGGAT
TGCTTCATCCGCGGGAACAATGTGCTCTACATCAGCACACAAAAGCGAAG
GTGATGCTCTACATCAGCACACAAAAGCGAAGGTGA
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