prot_H-paniculata_contig2474.6710.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2474.6710.1
Unique Nameprot_H-paniculata_contig2474.6710.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length253
Homology
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BLAST of mRNA_H-paniculata_contig2474.6710.1 vs. uniprot
Match: D7FXJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ2_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 7.270e-19
Identity = 53/85 (62.35%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   12 GLVGLVDAAIKRGDRAKALELLSLEASHGRVRGREGAAAVAEPGRGRRQVSPWTVDCSLHPWLEGRRPLLGSTLVISTDELSLVW 96
            GLVG VD AI RGDR +ALELLSLEASHGRV         A+ GR      PWTV+CSLHPWLE RRP LGS L I+ D LS  W
Sbjct:  325 GLVGRVDDAIARGDRRRALELLSLEASHGRV--------SAQKGR-----LPWTVNCSLHPWLENRRPFLGSVLTIAPDSLSADW 396
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2474.6710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXJ2_ECTSI7.270e-1962.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2474contigH-paniculata_contig2474:1776..5756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2474.6710.1mRNA_H-paniculata_contig2474.6710.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2474 1679..6233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2474.6710.1 ID=prot_H-paniculata_contig2474.6710.1|Name=mRNA_H-paniculata_contig2474.6710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
MDKDGEREDITGLVGLVDAAIKRGDRAKALELLSLEASHGRVRGREGAAA
VAEPGRGRRQVSPWTVDCSLHPWLEGRRPLLGSTLVISTDELSLVWQHKI
NGTRCDSNHDEQEHRHQHGEPSSSPPAAWRSSGDPGYFPSTAVRAGPNIS
PARAAAQSCGEEKEVEEEPRGKEQSSERFAEWPGESRCRWTGVSLEGMWD
VMESTLQGSGSLQTLLEDSGARVIKDKDKDENEDEDGRRVGKRGNEFPRA
KL*
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