mRNA_H-paniculata_contig2472.6705.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 5.710e-15 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEVLSFLGVKTLAQDACRKNEA 252
PHL+LIARL H I STSCQAERNFS L+ L+G LR+S+ P K+E+++FLRL + IPEV + DA N+A
Sbjct: 412 PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKAL-------HDAVEANKA 482
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 5.940e-15 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEVLSFLGVKTLAQDACRKNEA 252
PHL+LIARL H I STSCQAERNFS L+ L+G LR+S+ P K+E+++FLRL + IPEV + DA N+A
Sbjct: 740 PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKAL-------HDAVEANKA 810
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 7.540e-12 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEVLSFLGVKTLAQDACRKNEA 252
P+L+ IARL+ I +TSCQAERNFS L+ L+G+LR ++ P ++E+M+ +RL + + EV +F + A++ KN A
Sbjct: 448 PYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATKNAA 525
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.360e-10 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEV 195
P+L+ IARL I +TSCQAERNFS L+ L+G LR ++ P+K+E+M+F+RL + + EV
Sbjct: 556 PYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEV 614
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.390e-10 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEV 195
P+L+ IARL I +TSCQAERNFS L+ L+G LR ++ P+K+E+M+F+RL + + EV
Sbjct: 751 PYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEV 809
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 9.220e-9 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEVLSFLGVKTLAQDACRKN 246
P+L+ IARL I ++SCQAERNFS LS L+G LR ++ K+E+M+ +RL + + EV +LA+ K+
Sbjct: 174 PYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKS 249
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.320e-8 Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEV 195
P+L+ IARL I +TSCQAERNFS S L+G LR + P+K E+ +F+RL + + EV
Sbjct: 345 PYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVAEV 403
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.380e-8 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEVLSFLGVKTLAQDACRKN 246
P+L+ IARL I ++SCQAERNFS LS L+G LR ++ K+E+M+ +RL + + EV +LA+ K+
Sbjct: 739 PYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKS 814
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 8.860e-8 Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 19 PHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFLRLKQESIPEVLSF 204
P+L+ IARL+ I +TSCQAERNFS L+ L+GDL ++ ++E+M+ +RL + + EV ++
Sbjct: 552 PYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAY 613
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Match: A0A0N4YUQ6_NIPBR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4YUQ6_NIPBR) HSP 1 Score: 50.1 bits (118), Expect = 1.120e-5 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 1 VVSTKSPHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEKMIFL 165
V + K P + L+A+ S +TS ++ER FST L+VGDLR SLSP +EK++FL
Sbjct: 70 VNAAKYPLMKLLAKRYLSAPATSAESERLFSTAGLVVGDLRRSLSPENLEKLVFL 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2472.6705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2472.6705.1 >prot_H-paniculata_contig2472.6705.1 ID=prot_H-paniculata_contig2472.6705.1|Name=mRNA_H-paniculata_contig2472.6705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp VVSTKSPHLSLIARLNHSIASTSCQAERNFSTLSLLVGDLRTSLSPTKIEback to top mRNA from alignment at H-paniculata_contig2472:2953..3213+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2472.6705.1 ID=mRNA_H-paniculata_contig2472.6705.1|Name=mRNA_H-paniculata_contig2472.6705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=261bp|location=Sequence derived from alignment at H-paniculata_contig2472:2953..3213+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2472:2953..3213+ >mRNA_H-paniculata_contig2472.6705.1 ID=mRNA_H-paniculata_contig2472.6705.1|Name=mRNA_H-paniculata_contig2472.6705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at H-paniculata_contig2472:2953..3213+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |