prot_H-paniculata_contig2469.6695.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A6H5KKC3_9PHAE (LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKC3_9PHAE) HSP 1 Score: 291 bits (744), Expect = 6.680e-97 Identity = 158/238 (66.39%), Postives = 181/238 (76.05%), Query Frame = 0
Query: 1 MKSVAVLAVVVASAAAFVPNAPINGRVPASRTARSSSLQM----------AKK--PAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQP-QPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQRGDPYAGFV 225
MK A++VASA AFVP+AP+ + A SSSLQM A K PA PV+++ AVDGLVG DIETGG FDPLGFG+NCPP+QMQWYRAAELKHGR+CMLAAFGQ Q + HWNDPSGIFD+ W AMQQVYEQRP AF+QI LAIFA EV+GNK+QE++ GGDLG+DPLGLKPSNPEAWERVQLRELKNGRLAM AI GMI QE I+G+GVL++ D AG
Sbjct: 1 MKCATAFALMVASANAFVPSAPLPT---VTSRASSSSLQMIGGFGRKSKPAPKAPPARPVSTN--AVDGLVGADIETGGPFDPLGFGKNCPPQQMQWYRAAELKHGRVCMLAAFGQITQHF-THWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIILAIFAVEVYGNKRQEENEAGGDLGFDPLGLKPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSLAGLA 232
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A835YT25_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT25_9STRA) HSP 1 Score: 194 bits (492), Expect = 7.770e-59 Identity = 117/228 (51.32%), Postives = 145/228 (63.60%), Query Frame = 0
Query: 2 KSVAVLAVVVASAAAFVPNAPINGRVPASRTARSSSLQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQP-QPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQE---QSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQRGDPYAGFV 225
K+VA LA+V S +AFV +AP+ V + A PV G +GLVG D+E +DPLGF N P+ + WYRAAELKHGR+ MLAA G+ QSY H DP +F Q +PW A+QQVY +RPLA QI LAIFA E G QQ Q+P GDL WDPL LKPS+PE WE+VQLRELKNGRLAM+AIAG QE+++G G +++ YAG +
Sbjct: 4 KAVAGLALVAGSVSAFVQHAPLRTGV-------------VSRSAGPVMKLGPGGEGLVGSDLELA-TWDPLGFTNNQNPDTINWYRAAELKHGRVAMLAALGEIFQSY-YHLPDP--VFSQSARPWDALQQVYAERPLAVAQILLAIFACEAIGQAQQAKPGQAP--GDLNWDPLNLKPSDPETWEKVQLRELKNGRLAMMAIAGFFVQENLTGQGPIEQ--IYAGHI 210
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: FCP_CHAMQ (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=FCP_CHAMQ) HSP 1 Score: 177 bits (448), Expect = 3.250e-52 Identity = 108/216 (50.00%), Postives = 136/216 (62.96%), Query Frame = 0
Query: 3 SVAVLAVVVASAAAFVPNAPINGRVPASRTARSSSLQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQP-QPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQEQ-SPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQ 216
S AV A++V SA+AF+ A N +AK A GS+ +GL+G D+E +FDPLGF N P ++WYRAAELKHGR+ MLAA GQ VQS+ H DP +F + +PW A+ +V +RPLA VQI LAIFA E G Q + GDLGWDPL L+ SN E +ER QLRELKNGRLAMIAI MI QE+++G GV++
Sbjct: 4 SAAVAALMVGSASAFLAPAQFNS--------------VAKSSGALSMKLGSSAEGLIGSDLELP-EFDPLGFTNNPAPGALEWYRAAELKHGRVAMLAALGQLVQSF-YHLPDP--VFSESAKPWQALVKVCNERPLAAVQIGLAIFACEAIGQANQAKPGQAAGDLGWDPLNLRGSNEEIFERAQLRELKNGRLAMIAITAMIVQENLTGYGVIE 201
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A0G4GYX1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GYX1_VITBC) HSP 1 Score: 172 bits (435), Expect = 3.070e-50 Identity = 107/220 (48.64%), Postives = 138/220 (62.73%), Query Frame = 0
Query: 3 SVAVLAVVVAS-AAAFVPNAPINGRVPASRTARSSSLQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQPQP-WAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQE---QSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQR 217
++A+LAVV A A+AFVPNA + P + S+++ G+ GL+G D+E +FDPLGF N E ++WYRAAELKHGR+CMLAA GQ VQS+ H DPSG+FD + A +V +RP A +QI LAIFA EV G K Q Q+P GDL +DP ++ +PE WE QLRELKNGRLAMI I M+ QE+ISG GV+ +
Sbjct: 8 TLALLAVVAAEDASAFVPNASPLLKSPKRSLRTTPSMKL-----------GTNAQGLIGSDLEWP-EFDPLGFTNNISDETLEWYRAAELKHGRVCMLAALGQLVQSFW-HLPDPSGVFDSTDSSFGAFNKVVSERPWAAIQILLAIFAVEVLGAKTQAKPGQAP--GDLDFDPFKVRSDDPEIWEATQLRELKNGRLAMIGITAMLVQEAISGKGVIAQ 212
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: W7TCK1_9STRA (Chloroplast light harvesting protein isoform 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCK1_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.740e-49 Identity = 93/168 (55.36%), Postives = 115/168 (68.45%), Query Frame = 0
Query: 52 GSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQ-PQPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGN-KQQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQR 217
GS+ GL G DIE +FDPLGF N PE + WYRAAELKHGR+ MLAA GQ VQ + D SG+F +P A+ +V +RPLA +QI LAIFA E G Q + GDLGWDPL LK +PE + +VQ RELKNGRLAMIAIAGM+ QE+++GLGV+++
Sbjct: 38 GSSAQGLAGSDIEFP-EFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHF-YTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQ 203
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A835Z156_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z156_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.450e-47 Identity = 99/215 (46.05%), Postives = 131/215 (60.93%), Query Frame = 0
Query: 3 SVAVLAVVVASAAAFVPNAPINGRVPASRTARSSSLQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQPQPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQR 217
+VA LA+V A A+AFVP++ +V +R A SS++QM + DGLVG +ETGG +DP E + WYRAAELKHGR+CMLAA G VQ Y W P +F + A+ Q+Y +RP A QI LAI A EV G+ Q+ + GDL WDPLGL P +PE +QL+ELKNGRLAM+A AG QE+++G G +++
Sbjct: 6 AVAALALV-AGASAFVPSSFSGAQV--ARVASSSAMQM-------------SADGLVGASVETGGVWDPANLASKASEEDLAWYRAAELKHGRVCMLAAVGCLVQGY---WQLPDPVFSNTKAVDAVAQIYTERPGAIYQILLAIAAIEVLGSSIQKYT-APGDLKWDPLGLAPEDPEELATLQLKELKNGRLAMVATAGFFLQEALTGQGAVEQ 200
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A0G4F0S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0S3_VITBC) HSP 1 Score: 158 bits (400), Expect = 6.100e-45 Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 0
Query: 31 RTARSSS--LQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQPQPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQR 217
R +RS S +QMA P S GLVG DI+ FDPLG + E ++WYRAAELKHGR+ MLAA G VQ+ + P F + P A+ +++ +RPLA +QI AI A EV GN+ Q Q+ GGDL WDPLG+KP++PE + ++QLRELKNGRLAMI++ GM AQE+++ G + +
Sbjct: 36 RASRSPSRTMQMALDP--------SFAGGLVGNDIDAP-NFDPLGLSKTADDETLKWYRAAELKHGRVAMLAALGFLVQNI---YQLPDSPFQEANPINAVYKLWSERPLAIMQILTAIAAIEVLGNQVQLQTEDGGDLKWDPLGIKPNDPEEFRKMQLRELKNGRLAMISVLGMTAQEALTDQGPIDQ 212
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A0G4GRR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRR2_9ALVE) HSP 1 Score: 154 bits (389), Expect = 1.940e-43 Identity = 101/214 (47.20%), Postives = 130/214 (60.75%), Query Frame = 0
Query: 7 LAVVVASAAAFVPNAPINGRVPASRTARSSSLQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQPQPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNK-QQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQRGD 219
L++ V+S AFVP++ NG + +SR +RS + K G G+ G D E FDP+GF +N P E ++WYRAAELKHGR+CMLAA G V GI + P F+ A+ ++ E+RP A +QI LAIFA E G K Q E GGDLG+DPLGLKPS+PE E QLRE+KNGRLAMIAI G AQE ++ ++ D
Sbjct: 8 LSLSVSSCTAFVPSS--NGLL-SSRPSRSGKSSLDMKL-------GRNAVGMPGTDFELP-DFDPIGFTQNAPLETLEWYRAAELKHGRVCMLAALGNIVA--GIT-HLPDTCFEGKGSLGAVYKIMEERPWAGLQIVLAIFAVEALGQKIQSEPGREGGDLGFDPLGLKPSDPELLEATQLREIKNGRLAMIAILGQWAQEYVTNRPIIDFDD 207
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: W7TEK9_9STRA (Fucoxanthin chlorophyll a c binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEK9_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.010e-41 Identity = 81/163 (49.69%), Postives = 110/163 (67.48%), Query Frame = 0
Query: 55 VDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQPQPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQR 217
+ G+VG D+E +FDPLG +N E + WYRAAELKHGR+CMLA+ G VQ ++ P G F+ +P A+ +V +RPLA VQI +AI A EV G Q+ + GDL +DPLGLKP +PE +QL+ELKNGRLAM+A AG+ AQE ++G G +++
Sbjct: 53 ISGIVGSDVEVP-EFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGL---YHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYT-APGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQ 210
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC) HSP 1 Score: 147 bits (372), Expect = 8.070e-41 Identity = 95/222 (42.79%), Postives = 130/222 (58.56%), Query Frame = 0
Query: 1 MKSVAV-----LAVVVASAAAFVPNAPINGRVPASRTARSSSLQMAKKPAAPVASSGSAVDGLVGFDIETGGQFDPLGFGRNCPPEQMQWYRAAELKHGRICMLAAFGQFVQSYGIHWNDPSGIFDQPQPWAAMQQVYEQRPLAFVQIFLAIFAAEVWGNKQQEQSPLGGDLGWDPLGLKPSNPEAWERVQLRELKNGRLAMIAIAGMIAQESISGLGVLQR 217
MK VAV +AV AAFVP+AP+ +P R RS++ +M +V+ ++G D+ETGG FDPL F + + RA ELKHGRI MLA G FVQS G+H DP +F +P+P +A+ +V +RP A QI AI A E+ +Q ++ GDLG+ K S+PE + + QLRELKNGRLAMI I GM+ QE ++G V ++
Sbjct: 1 MKCVAVASLLLIAVAYGEEAAFVPSAPLRS-LPTRRALRSTTPKM-------------SVEEMIGADVETGGVFDPLKFSED--EASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDP--VFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQ 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2469.6695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2469.6695.1 ID=prot_H-paniculata_contig2469.6695.1|Name=mRNA_H-paniculata_contig2469.6695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bpback to top |