mRNA_H-paniculata_contig24599.6672.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A4Y2AAN3_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2AAN3_ARAVE) HSP 1 Score: 99.8 bits (247), Expect = 1.030e-24 Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 1 IMITANMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKF 318
++ AN+ +WAEAV +A Y Q+R PT+P+ TPYE W P L ++RVF C AY Q Q+R K DDKA +FLGYD S YRI+ D K + +SR VKF
Sbjct: 5 LLSEANLPQRFWAEAVMTATYLQNRLPTKPNKT-TPYELWTNRKPDLSHIRVFGCKAYAYIQKQKRGKLDDKAVEGIFLGYDYRSKGYRIYLGDKK-IMISRTVKF 108
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A6H5GEM5_9HEMI (Integrase catalytic domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GEM5_9HEMI) HSP 1 Score: 99.4 bits (246), Expect = 5.430e-22 Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 1 IMITANMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDEED 330
++ A++ YWAEAV +A Y +R+PT+ H TP+E W G P L ++R+F C A Q+R+K+D K+ +F+GY ED+ YR+ P K +Q SR+V F EED
Sbjct: 156 MLADASLPKSYWAEAVNTAVYLNNRSPTKAVHDKTPFEAWTGNKPDLSHIRIFGCKAMAQVPRQKRKKWDPKSEEYIFVGYGEDTKGYRLLHPVTKQIQFSRDVIFLEED 265
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A8J5FC91_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FC91_ZINOF) HSP 1 Score: 97.4 bits (241), Expect = 2.580e-21 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 31 YWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDE 324
YWAEAV +A Y +R+PT+ H TPYE WH + P +D+ ++F AY + Q+R KFD K +F+GY+ +S YR+ P + +SR+V FDE
Sbjct: 498 YWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYNNESKGYRLLDPSTLKIIVSRDVIFDE 595
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A8J5GP83_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GP83_ZINOF) HSP 1 Score: 97.1 bits (240), Expect = 3.630e-21 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 31 YWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDE 324
YWAEAV +A Y +R+PT+ H TPYE WH + P +D+ ++F AY + Q+R KFD K +F+GY +S YR+ P + +SR+V FDE
Sbjct: 636 YWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYSNESKGYRLLDPSTLKIIVSRDVIFDE 733
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A7C8ZAD7_OPUST (Uncharacterized protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZAD7_OPUST) HSP 1 Score: 94.0 bits (232), Expect = 4.890e-21 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 31 YWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDE 324
+WAEAV +A Y + +PT+ +G TPYE W G PK+ +LRVF C AY + Q R K D+K+ +F+GY S +Y++++P + V +SR+V FDE
Sbjct: 15 FWAEAVATAVYLLNISPTKAVYGRTPYEAWTGNKPKVSHLRVFGCIAYALVHSQLRHKLDEKSEKCIFVGYSTQSKAYKLYNPISGKVLVSRDVVFDE 112
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A8J5F3N7_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F3N7_ZINOF) HSP 1 Score: 96.7 bits (239), Expect = 5.050e-21 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 31 YWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDE 324
YWAEAV +A Y +R+PT+ H TPYE WH + P +D+ ++F AY + Q+R KFD K +F+GY +S YR+ P + +SR+V FDE
Sbjct: 606 YWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYSNESKGYRLLDPSTFKIIVSRDVIFDE 703
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI) HSP 1 Score: 95.9 bits (237), Expect = 9.410e-21 Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 1 IMITANMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKF 318
++ A +G +WAEA+ +A Y +R+P+R TPYE WHGE P L +LRVF C+A+ Q+R+K D K+ +F+GY ED YR+ P K V SR+V F
Sbjct: 572 MLADAKLGKEFWAEAIVTACYLINRSPSRALGERTPYEVWHGEKPDLSHLRVFGCSAWAHIPKQRRKKLDPKSERLIFIGYPEDRRGYRLLDPVTKRVTNSRDVHF 677
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU) HSP 1 Score: 95.5 bits (236), Expect = 1.260e-20 Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 16 NMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDE 324
++ + +WAEA+ +A + +R+PT+ TP+E WH PK+D ++F CTAY Q+R KFD+K +F+GY + S +YR+ P KS+ +SR+V FDE
Sbjct: 306 SLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 408
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A8J6L9W6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9W6_TENMO) HSP 1 Score: 95.5 bits (236), Expect = 1.280e-20 Identity = 41/106 (38.68%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 1 IMITANMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKF 318
+M+ + + +WAEAV +A Y ++R P++ G TPYE W G+ P + + R F C + + + R KFD +A VFLGY E+S YR+ P+ + V+++R+VKF
Sbjct: 470 LMLQSGLPPSFWAEAVNTANYIRNRCPSKSLGGRTPYEVWTGKKPNVSHFREFGCRVFRLDRQPNRGKFDSRAKEGVFLGYSEESKGYRVWMPNERKVEITRDVKF 575
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU) HSP 1 Score: 95.5 bits (236), Expect = 1.280e-20 Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 16 NMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRVFSCTAYDMFQPQQRRKFDDKAWVEVFLGYDEDSPSYRIHSPDNKSVQLSRNVKFDE 324
++ + +WAEA+ +A + +R+PT+ TP+E WH PK+D ++F CTAY Q+R KFD+K +F+GY + S +YR+ P KS+ +SR+V FDE
Sbjct: 543 SLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 645 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24599.6672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24599.6672.1 >prot_H-paniculata_contig24599.6672.1 ID=prot_H-paniculata_contig24599.6672.1|Name=mRNA_H-paniculata_contig24599.6672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp MITANMGSPYWAEAVRSAGYCQDRTPTRPHHGGTPYEKWHGETPKLDNLRback to top mRNA from alignment at H-paniculata_contig24599:2909..3241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24599.6672.1 ID=mRNA_H-paniculata_contig24599.6672.1|Name=mRNA_H-paniculata_contig24599.6672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=333bp|location=Sequence derived from alignment at H-paniculata_contig24599:2909..3241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24599:2909..3241+ >mRNA_H-paniculata_contig24599.6672.1 ID=mRNA_H-paniculata_contig24599.6672.1|Name=mRNA_H-paniculata_contig24599.6672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig24599:2909..3241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |