mRNA_H-paniculata_contig24513.6645.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 72.8 bits (177), Expect = 2.290e-13 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
PV + + K W EA+ E + +E WT V N+ KG +SA+W+F K+DE+GNV + KARLVARG+S
Sbjct: 174 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYS 248
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 72.8 bits (177), Expect = 3.110e-13 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
PV + + K W EA+ E + +E WT V N+ KG +SA+W+F K+DE+GNV + KARLVARG+S
Sbjct: 549 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYS 623
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI) HSP 1 Score: 64.3 bits (155), Expect = 3.040e-10 Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 EPPVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
E P + + + W EA++VE + L+N WT VD + ++A+WVF K D GNV+K KARLVARGF+
Sbjct: 861 EDPQMLAQARASPNWPKWEEAIKVELDSLDNTGTWTIVD-LPAARKAITAKWVFKTKQDADGNVSKYKARLVARGFT 936
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA) HSP 1 Score: 63.5 bits (153), Expect = 5.520e-10 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
P + + + +K WN A++ E E L K WT V + N++S +W+F K D +G +TK KARLVARGFS
Sbjct: 63 PTTYDEAQSHPNKKEWNLAMKSEIESLYKNKTWTLVKKPQN-RNIISTKWIFKIKKDGEGQITKYKARLVARGFS 136
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A2G8SLM4_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SLM4_9APHY) HSP 1 Score: 60.1 bits (144), Expect = 9.420e-9 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
P ++ K+ W EA++ E E L W V+ G+N+VS RWVF K D GN+++ +ARLVARGFS
Sbjct: 998 PASLAEAKRRPEWPRWEEAMKEEMEALAKHGTWR-VERPPLGTNIVSCRWVFHAKKDASGNISRYRARLVARGFS 1071
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A2G8SUK6_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SUK6_9APHY) HSP 1 Score: 60.1 bits (144), Expect = 9.460e-9 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
P ++ K+ W EA++ E E L W +++ G+N+VS RWVF K D GN+++ +ARLVARGFS
Sbjct: 1001 PASLAEAKRRPEWPRWEEAMKEEMEALSKHGTWR-LEHPPPGTNIVSCRWVFHAKKDASGNISRYRARLVARGFS 1074
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A2G8S3F3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S3F3_9APHY) HSP 1 Score: 60.1 bits (144), Expect = 9.460e-9 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
P ++ K+ W EA++ E E L W V+ G+N+VS RWVF K D GN+++ +ARLVARGFS
Sbjct: 1014 PASLAEAKRRPEWPRWEEAMKEEMEALAKHGTWR-VERPPLGTNIVSCRWVFHAKKDASGNISRYRARLVARGFS 1087
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: UPI001E2759C6 (uncharacterized protein LOC123684598 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2759C6) HSP 1 Score: 59.3 bits (142), Expect = 1.740e-8 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1
Query: 1 EPPVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGF 228
+ PV + + +K W EAV + LE W V+ + V+ ++WVF K DE GN++K KARLVARGF
Sbjct: 13 DDPVSYDEAMSSENKAKWTEAVESAIKALEENDTWI-VEKNPNNAEVIDSKWVFKGKKDEAGNISKFKARLVARGF 87
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A182GGE6_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GGE6_AEDAL) HSP 1 Score: 58.9 bits (141), Expect = 2.400e-8 Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 7 PVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
P SD++ + LW +A++ E + LE WT + + G + +S +W+F K E G T+ KARLVARGFS
Sbjct: 653 PESLSDLQIRDDRNLWQQAMKEEMDSLERNGTWT-LTKLPAGRSAISCKWIFKIKPGEDGQPTRYKARLVARGFS 726
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Match: A0A1S3X7P2_TOBAC (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3X7P2_TOBAC) HSP 1 Score: 56.6 bits (135), Expect = 2.970e-8 Identity = 28/69 (40.58%), Postives = 38/69 (55.07%), Query Frame = 1
Query: 25 IKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSARWVFAWKIDEQGNVTKPKARLVARGFS 231
IK+ W ++ E E K W V + K V+ RWVF K+DEQGN+TK KARLV +G++
Sbjct: 44 IKEALKDLYWIIIMQEELNKFERSKVWHLVQ-IPKNKTVIGTRWVFRNKLDEQGNITKNKARLVVQGYN 111 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24513.6645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24513.6645.1 >prot_H-paniculata_contig24513.6645.1 ID=prot_H-paniculata_contig24513.6645.1|Name=mRNA_H-paniculata_contig24513.6645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp EPPVRFSDIKKLTHKTLWNEAVRVEFEDLENPKAWTYVDNVRKGSNVVSAback to top mRNA from alignment at H-paniculata_contig24513:3556..3786+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24513.6645.1 ID=mRNA_H-paniculata_contig24513.6645.1|Name=mRNA_H-paniculata_contig24513.6645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=231bp|location=Sequence derived from alignment at H-paniculata_contig24513:3556..3786+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24513:3556..3786+ >mRNA_H-paniculata_contig24513.6645.1 ID=mRNA_H-paniculata_contig24513.6645.1|Name=mRNA_H-paniculata_contig24513.6645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig24513:3556..3786+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |