mRNA_H-paniculata_contig24403.6609.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24403.6609.1
Unique NamemRNA_H-paniculata_contig24403.6609.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 1.790e-48
Identity = 107/189 (56.61%), Postives = 123/189 (65.08%), Query Frame = 1
Query:   34 LDNVIIVANKADLAVDLPPXXXXXXXXXXXXXXXXXXXXXXXXXXTAEYPSSEIVEN-----------------QGKEEGRRRQS--LWRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            LD++I+VANKADLA+ L                          X +    ++E V +                 +G EEG       +W+VSCKTKEGLD FM HLEAEVRSRFQGA DDESPLITRRRHRQHVE+CL ALRA+QR  +PLDLAAEELRI++ ELGRITGAVGVEELLDVIFRDFCIGK
Sbjct:  439 LDDLIVVANKADLALTLLEGESGEADHHERELTSLAAAAAAATXASGPGTTAEAVGSRAGAAETDGVGAATRGTEGDEEGTSGSGGRVWKVSCKTKEGLDGFMEHLEAEVRSRFQGAADDESPLITRRRHRQHVEACLLALRAAQRPQMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 627          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 6.780e-48
Identity = 125/202 (61.88%), Postives = 138/202 (68.32%), Query Frame = 1
Query:    1 GGESSRSVGGALDNVIIVANKADLAVDL-------PPXXXXXXXXXXXXXXXXXXXXXXXXXXTAEYPSSEIVE------------NQGKEEGRRRQS--LWRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            G  SS     ALD++I+VANKADLA+ L                  XXXXXXXXXXXXX    TAE   S                 +G EEGR      +W++SCKTKEGLD FM HLEAEVRSRFQGA DDESPLITRRRHRQHVE+CL ALRA+QR  +PLDLAAEELRI++ ELGRITGAVGVEELLDVIFRDFCIGK
Sbjct:  589 GSGSSGGGSAALDDLIVVANKADLALTLLEGESGEAEHHEQELTSLXXXXXXXXXXXXXGPGRTAEAVGSRAGAAEMDGVGAATRGTEGDEEGRSGGGGRVWKLSCKTKEGLDGFMEHLEAEVRSRFQGAADDESPLITRRRHRQHVEACLLALRAAQRPQMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 790          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.280e-32
Identity = 67/105 (63.81%), Postives = 83/105 (79.05%), Query Frame = 1
Query:  232 QSLWRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDE-SPLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            Q +W++SCKT EG++ F+ HLE E+  R+Q  +  E +PLITR RHR HV++CLSAL  S   +LP+DLAAEELR ++ ELGRITGAV VEELLDVIFRDFCIGK
Sbjct:  369 QPVWQLSCKTGEGVEAFLRHLEDEIARRYQTQQGQEDAPLITRARHRHHVQACLSALEGSMDPSLPMDLAAEELRYASAELGRITGAVDVEELLDVIFRDFCIGK 473          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A7S2USR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.090e-24
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 1
Query:  235 SLWRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALR-ASQRANLPL-DLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIG 540
            ++W VSC + +G + F+ HL  EV+ +F  + +D +PLITR RHR H+E C+ AL  A+  AN    DLAAEELR++  ELGRITGAV VEE+LDVIFRDFCIG
Sbjct:  140 NVWVVSCNSGDGTEEFLSHLATEVKRKFDRSGED-APLITRSRHRTHIERCVQALETAALLANTAATDLAAEELRVAALELGRITGAVDVEEVLDVIFRDFCIG 242          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: R1DA12_EMIHU (TrmE-type G domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DA12_EMIHU)

HSP 1 Score: 113 bits (283), Expect = 2.480e-24
Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 1
Query:  241 WRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALR-----ASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            WR+SC T EG+  F+  L   VR R  G+++ E+PL+TR RHRQH+E C++AL      AS     PLDLA EELR ++ ELGRITG V VEE+LDVIFRDFCIGK
Sbjct:  444 WRISCTTGEGVAPFLDQLGGIVR-RLYGSDEGETPLVTRARHRQHLEGCVAALAQFEELASLGEAAPLDLACEELRTASLELGRITGRVDVEEVLDVIFRDFCIGK 548          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A0M0JVR3_9EUKA (tRNA modification gtpase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVR3_9EUKA)

HSP 1 Score: 107 bits (268), Expect = 1.750e-22
Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  229 RQSLWRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRA-SQRANL----PLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            R+  + +SC T EG+  F+  L   + S++ GA D E+ LITR RHR+H+  C  AL A  Q A L    PLDLAAEE+RI+  ELG+ITG + VEELLDVIFRDFCIGK
Sbjct:  373 RERQYHLSCTTGEGVQPFLDALSQMIASKY-GASDREAALITRARHREHLRRCADALEAFEQYAGLGDSAPLDLAAEEIRIAANELGKITGRIDVEELLDVIFRDFCIGK 481          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.910e-22
Identity = 63/117 (53.85%), Postives = 79/117 (67.52%), Query Frame = 1
Query:  208 GKEEGRRRQSLWRVSCKTKEGLDVFMGHLEAEVRSRFQ--GAEDD--ESPLITRRRHRQHVESCLSALRASQ-RANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            G  +G    + + VS  T EG++  +  L+A +   F   G +D+  E+P+ITR RHR HVE CL AL AS     L LD+AAEELRI++ ELGRITGAV VEE+LDVIFRDFCIGK
Sbjct:  349 GAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 465          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A7S0NV32_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NV32_9EUKA)

HSP 1 Score: 103 bits (256), Expect = 3.950e-22
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1
Query:  241 WRVSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRA-----SQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            W +SC+T EG+  F+  L   V+  + GA   E  L+TR RHRQH+ +C++A+ A     S+    P+D+AAEELR +  ELGRITG V VEELLDVIFRDFCIGK
Sbjct:  151 WALSCQTGEGVQPFLDALAKMVKELY-GASQREPALVTRARHRQHLGACVAAMEAYADLASRGDAAPVDIAAEELRTAVNELGRITGRVDVEELLDVIFRDFCIGK 255          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A448YYS9_9STRA (TrmE-type G domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYS9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.360e-22
Identity = 56/115 (48.70%), Postives = 80/115 (69.57%), Query Frame = 1
Query:  214 EEGRRRQSLWRVSCKTKEGLDVFMGHLEAEVRSRFQGAED-DESPLITRRRHRQHVESCLSALRA----SQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            +E +    ++ +SC+ +EG+D F+  L  EV +R +G+ D  E  +ITR RHRQHVE+ + AL      S + N+ +D+AAEELR++  ELGRITGAV VE++LDV+F DFCIGK
Sbjct:  840 QESKFGDGIFDISCQNQEGIDTFLDALTQEVVTRTRGSADVGEGAMITRARHRQHVEAAVEALERFAMLSTQGNMAVDMAAEELRLAGSELGRITGAVDVEDVLDVLFSDFCIGK 954          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A8J5XZ82_DIALT (TrmE-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ82_DIALT)

HSP 1 Score: 104 bits (260), Expect = 3.020e-21
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:  247 VSCKTKEGLDVFMGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRAN-LPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 543
            +SC+T EG+D  +  LEA VR+  +G    E+ ++TR RHR+H+E  + AL    R + L +DLAAEELRI+  E+G++TG + VEE+LD+IFRDFCIGK
Sbjct:  462 ISCETGEGMDALLDALEARVRALLEGEGGGETAIVTRARHREHLEQAVGALERFARLDGLMVDLAAEELRIAASEVGKVTGTIRVEEMLDIIFRDFCIGK 561          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K111_9PHAE1.790e-4856.61TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
D8LG51_ECTSI6.780e-4861.88TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A836CK05_9STRA1.280e-3263.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2USR2_9STRA1.090e-2456.73Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
R1DA12_EMIHU2.480e-2457.55TrmE-type G domain-containing protein n=2 Tax=Emil... [more]
A0A0M0JVR3_9EUKA1.750e-2254.55tRNA modification gtpase n=1 Tax=Chrysochromulina ... [more]
A0A4D9CTT5_9STRA2.910e-2253.85TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A7S0NV32_9EUKA3.950e-2252.83Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A448YYS9_9STRA5.360e-2248.70TrmE-type G domain-containing protein n=1 Tax=Pseu... [more]
A0A8J5XZ82_DIALT3.020e-2151.00TrmE-type G domain-containing protein n=1 Tax=Diac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24403contigH-paniculata_contig24403:415..2168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue2.6e-34
Seed eggNOG ortholog2880.D8LG51
Preferred nameGTPBP3
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03650,ko:K10769
KEGG ReactionR08701
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000959,GO:0000963,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0007275,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009790,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032543,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048513,GO:0048568,GO:0048731,GO:0048856,GO:0070525,GO:0070899,GO:0070900,GO:0071704,GO:0090304,GO:0090646,GO:0097159,GO:0097367,GO:0140053,GO:1900864,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.GTP binding
EggNOG OGsCOG0486@1,KOG1191@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons2
Model size988
Cds size264
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24403.6609.1prot_H-paniculata_contig24403.6609.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24403 697..1726 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929705.7940443-UTR-H-paniculata_contig24403:414..6961622929705.7940443-UTR-H-paniculata_contig24403:414..696Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24403 415..696 +
1691480975.1625488-UTR-H-paniculata_contig24403:414..6961691480975.1625488-UTR-H-paniculata_contig24403:414..696Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24403 415..696 +
1622929705.8536222-UTR-H-paniculata_contig24403:1726..21681622929705.8536222-UTR-H-paniculata_contig24403:1726..2168Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24403 1727..2168 +
1691480975.200073-UTR-H-paniculata_contig24403:1726..21681691480975.200073-UTR-H-paniculata_contig24403:1726..2168Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24403 1727..2168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929705.8178601-CDS-H-paniculata_contig24403:696..7701622929705.8178601-CDS-H-paniculata_contig24403:696..770Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24403 697..770 +
1691480975.1805813-CDS-H-paniculata_contig24403:696..7701691480975.1805813-CDS-H-paniculata_contig24403:696..770Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24403 697..770 +
1622929705.8374054-CDS-H-paniculata_contig24403:1536..17261622929705.8374054-CDS-H-paniculata_contig24403:1536..1726Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24403 1537..1726 +
1691480975.1908772-CDS-H-paniculata_contig24403:1536..17261691480975.1908772-CDS-H-paniculata_contig24403:1536..1726Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24403 1537..1726 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24403.6609.1

>prot_H-paniculata_contig24403.6609.1 ID=prot_H-paniculata_contig24403.6609.1|Name=mRNA_H-paniculata_contig24403.6609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
MGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRANLPLD
LAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK*
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mRNA from alignment at H-paniculata_contig24403:415..2168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24403.6609.1 ID=mRNA_H-paniculata_contig24403.6609.1|Name=mRNA_H-paniculata_contig24403.6609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1754bp|location=Sequence derived from alignment at H-paniculata_contig24403:415..2168+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGGAGAGTCAAGCAGGTCAGTAGGCGGCGCCCTAGACAATGTAATTAT AGTGGCGAATAAAGCCGACCTGGCTGTCGATTTACCGCCGCCGCCGCCAC ATCGTCAACAACCCCAACAACCTGATGCGGATGCAATCGCGCTGCAAGCC TTGGCCGCCGCAGCCGCCACCGCTGAGTATCCTTCGTCGGAGATTGTGGA GAATCAAGGGAAGGAAGAGGGACGGCGGCGGCAGTCGCTGTGGCGAGTGT CTTGTAAAACGAAGGAAGGGCTGGACGTTTTCATGGGACATTTGGAGGCG GAGGTTCGATCCAGGTTTCAGGGGGCCGAGGACGACGAGTCTCCACTCAT CACCAGGTGGGTTATTATTAAGCGTATTGTAAAGCGTGGCCCTCTGTTGC CGGGCGTAGTGGCGCGGTGGTAGTGACAGAGCTGGTGGTGATTGTGGTAA TGGTGATGGTGTTTGCGGATGTCCATAATTCAGTGGCAAGACGCTTGATG TTTCAATGGAGATAATCCCATTGGTGCCATATCGTAAATTAACTTCAAGC GTTTGTGGCACAATGGATGGGTTCCCTCCCTTGATTGGAAACTATGGCAA ACGGTGGGGTAGATGTTCTTCGCGAGCCCTGGCCAGTCAAAGTAGTGTTG CTTGTGATTTCCCCACATGGTTCGGACAACATGGCCCTACAAACAGCAAT TCAGGTCTGCAAATGATATGCGCCTTTCGCGGATCACATGACCACCACCG ATAGACGTGGTCCCTTCTTTCATTCTGTGTTGTTACAAGCTTGGGGAAGA GACACGGGGCGATGACACGGACCCACTTGTTTGTCGGTATGCATATTTTG CATTACAAGTTGAGCTCCCTATCCATGTCTGTCTCTGTCCCCTCATTTTA CCTACCCACTCACCACCCTGGATCTTTCACGCCCCCCCTCCCCCATCTTT TCCATGTCGGCACTCCGTAACACACCACAACACCTACGACGTCGACGCTG ACAACGGCAGTTACAAGCTTTTGCTAATTTCTGAACACGCTTCATACACA CCACGCTTCATACACGCCCTTTTTCTGGCGGTTTCCAATCGTTTTCGTCT TGAACCCCGAACTATAAACCAGGCGACGACATCGTCAACACGTAGAGTCG TGTCTTTCGGCGCTGCGAGCGTCGCAAAGGGCTAACCTTCCGCTAGATCT CGCCGCGGAGGAACTTCGAATATCCAATCGCGAGCTGGGGCGTATCACTG GGGCGGTCGGGGTCGAGGAACTATTGGACGTAATATTTCGAGATTTTTGC ATTGGAAAATGACTTTCTCAATGGAGAGTGAAATTAGTGGATAGGCACGA GGCGGGGTGTGTGTGGGGGCGATTCAGGTGTGATTTTTTGTTCATTCCTT TTTATTGTGGAACTTTTGTTCTATTTTTTTAATTCAGCGTTTGCTTGGAA AAGTGTGAAGCTTTATATTTTAAGACGAAATCGTGGGCGTATTGGTAGGA CCACACACCTGTACTGCTAACAGTACAATTCGTGCATGTGCTCGGCTTGC CATATATGCCCATTGGTGTGCGTAAAAAGGAATGGTGTTTGTTTGCATTC TTCCCTGCCTTTGGAATAATTTATGGAATGCGAAATCTAGCTCCTCGAAT GTGTCGAGTTTTGCGCTCATGAAATAGGTTCCTCGATTTGCACTCCGCAA AACCGGCTATCGATAATGACATTTCTCGGGCTCGTATTATTGGAACAATA AAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig24403:415..2168+

>mRNA_H-paniculata_contig24403.6609.1 ID=mRNA_H-paniculata_contig24403.6609.1|Name=mRNA_H-paniculata_contig24403.6609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at H-paniculata_contig24403:415..2168+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACATTTGGAGGCGGAGGTTCGATCCAGGTTTCAGGGGGCCGAGGA
CGACGAGTCTCCACTCATCACCAGATGGGACATTTGGAGGCGGAGGTTCG
ATCCAGGTTTCAGGGGGCCGAGGACGACGAGTCTCCACTCATCACCAGGC
GACGACATCGTCAACACGTAGAGTCGTGTCTTTCGGCGCTGCGAGCGTCG
CAAAGGGCTAACCTTCCGCTAGATCTCGCCGCGGAGGAACTTCGAATATC
CAATCGCGAGCTGGGGCGTATCACTGGGGCGGTCGGGGTCGAGGAACTAT
TGGACGTAATATTTCGAGATTTTTGCATTGGAAAATGAGCGACGACATCG
TCAACACGTAGAGTCGTGTCTTTCGGCGCTGCGAGCGTCGCAAAGGGCTA
ACCTTCCGCTAGATCTCGCCGCGGAGGAACTTCGAATATCCAATCGCGAG
CTGGGGCGTATCACTGGGGCGGTCGGGGTCGAGGAACTATTGGACGTAAT
ATTTCGAGATTTTTGCATTGGAAAATGA
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